Miyakogusa Predicted Gene

Lj4g3v1614530.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1614530.3 tr|A9T6B9|A9T6B9_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,73.68,1e-18,SUBFAMILY NOT NAMED,NULL; ALR/ERV,NULL;
FAD-dependent thiol oxidase,Erv1/Alr; Evr1_Alr,Erv1/Alr; no
,CUFF.49547.3
         (175 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g38020.2                                                       274   4e-74
Glyma15g38020.1                                                       274   4e-74
Glyma13g26970.1                                                       259   1e-69
Glyma13g26970.2                                                       117   8e-27

>Glyma15g38020.2 
          Length = 200

 Score =  274 bits (700), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 137/189 (72%), Positives = 150/189 (79%), Gaps = 15/189 (7%)

Query: 1   MSENHPLQALFHSFD--------HVSNFVGLHVQSSG------RASLFSIKAPLAKTTSS 46
           M EN PLQALFH+ +        H+SNF+G+H Q SG       +   S KAPLAKT SS
Sbjct: 1   MPEN-PLQALFHNIEQVSSFVQHHLSNFIGIHFQPSGPHSGSLLSISSSTKAPLAKTASS 59

Query: 47  LQSGDNILKGKSAPPVTKEELGKATWTFLHTLAAQYPDNPTRQQKKDVKEHVQILTRLYP 106
           +Q GD  +KGKSA PVTKEELG+ATWTFLH LAAQYPDNPTRQQKKDVKE VQ+L R+YP
Sbjct: 60  VQLGDTAVKGKSAAPVTKEELGRATWTFLHILAAQYPDNPTRQQKKDVKELVQMLPRIYP 119

Query: 107 CKECADHFKEVLRANPVQAESHAHFSHWLCHVHNVVNRSLGKPVFPCERVDARWGKLECE 166
           C EC DHFKEVLRANPVQ  SHA FS WLCHVHNVVNRSLGKP+FPCERVDARWGKL+CE
Sbjct: 120 CGECRDHFKEVLRANPVQTGSHAEFSQWLCHVHNVVNRSLGKPIFPCERVDARWGKLDCE 179

Query: 167 QKACEIIGS 175
           Q ACEIIGS
Sbjct: 180 QNACEIIGS 188


>Glyma15g38020.1 
          Length = 200

 Score =  274 bits (700), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 137/189 (72%), Positives = 150/189 (79%), Gaps = 15/189 (7%)

Query: 1   MSENHPLQALFHSFD--------HVSNFVGLHVQSSG------RASLFSIKAPLAKTTSS 46
           M EN PLQALFH+ +        H+SNF+G+H Q SG       +   S KAPLAKT SS
Sbjct: 1   MPEN-PLQALFHNIEQVSSFVQHHLSNFIGIHFQPSGPHSGSLLSISSSTKAPLAKTASS 59

Query: 47  LQSGDNILKGKSAPPVTKEELGKATWTFLHTLAAQYPDNPTRQQKKDVKEHVQILTRLYP 106
           +Q GD  +KGKSA PVTKEELG+ATWTFLH LAAQYPDNPTRQQKKDVKE VQ+L R+YP
Sbjct: 60  VQLGDTAVKGKSAAPVTKEELGRATWTFLHILAAQYPDNPTRQQKKDVKELVQMLPRIYP 119

Query: 107 CKECADHFKEVLRANPVQAESHAHFSHWLCHVHNVVNRSLGKPVFPCERVDARWGKLECE 166
           C EC DHFKEVLRANPVQ  SHA FS WLCHVHNVVNRSLGKP+FPCERVDARWGKL+CE
Sbjct: 120 CGECRDHFKEVLRANPVQTGSHAEFSQWLCHVHNVVNRSLGKPIFPCERVDARWGKLDCE 179

Query: 167 QKACEIIGS 175
           Q ACEIIGS
Sbjct: 180 QNACEIIGS 188


>Glyma13g26970.1 
          Length = 197

 Score =  259 bits (661), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 130/187 (69%), Positives = 144/187 (77%), Gaps = 14/187 (7%)

Query: 1   MSENHPLQALFHSFD--------HVSNFVGLHVQSSGRASLFSI----KAPLAKTTSSLQ 48
           M EN PLQ LFH+ +        H+SNF+GLH   S    L SI    K PL+KT +S+Q
Sbjct: 1   MPEN-PLQTLFHNIEQVSSFVQHHLSNFIGLHHHPSS-GPLLSISSSTKGPLSKTATSVQ 58

Query: 49  SGDNILKGKSAPPVTKEELGKATWTFLHTLAAQYPDNPTRQQKKDVKEHVQILTRLYPCK 108
             D  +K KSA PVTKEELG+ATWTFLH LAAQYPDNPTRQQKKDVKE VQ+L R+YPC+
Sbjct: 59  LADTAVKEKSAAPVTKEELGRATWTFLHILAAQYPDNPTRQQKKDVKELVQMLPRIYPCR 118

Query: 109 ECADHFKEVLRANPVQAESHAHFSHWLCHVHNVVNRSLGKPVFPCERVDARWGKLECEQK 168
           EC DHFKEVLRANPV   SHA FS WLCHVHNVVNRSL KP+FPCERVDARWGKL+CEQ 
Sbjct: 119 ECRDHFKEVLRANPVLTGSHAEFSQWLCHVHNVVNRSLAKPIFPCERVDARWGKLDCEQN 178

Query: 169 ACEIIGS 175
           ACEIIGS
Sbjct: 179 ACEIIGS 185


>Glyma13g26970.2 
          Length = 117

 Score =  117 bits (292), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 78/119 (65%), Gaps = 14/119 (11%)

Query: 1   MSENHPLQALFHSFD--------HVSNFVGLHVQSSGRASLFSI----KAPLAKTTSSLQ 48
           M EN PLQ LFH+ +        H+SNF+GLH   S    L SI    K PL+KT +S+Q
Sbjct: 1   MPEN-PLQTLFHNIEQVSSFVQHHLSNFIGLHHHPSS-GPLLSISSSTKGPLSKTATSVQ 58

Query: 49  SGDNILKGKSAPPVTKEELGKATWTFLHTLAAQYPDNPTRQQKKDVKEHVQILTRLYPC 107
             D  +K KSA PVTKEELG+ATWTFLH LAAQYPDNPTRQQKKDVKE  +  T    C
Sbjct: 59  LADTAVKEKSAAPVTKEELGRATWTFLHILAAQYPDNPTRQQKKDVKELSKSCTDWITC 117