Miyakogusa Predicted Gene

Lj4g3v1599320.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1599320.2 tr|Q9LMD3|Q9LMD3_ARATH F14D16.9 OS=Arabidopsis
thaliana GN=Clgn PE=4 SV=1,85.71,3e-16,DDT,DDT domain; FAMILY NOT
NAMED,NULL; coiled-coil,NULL; seg,NULL,CUFF.49460.2
         (263 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g01530.1                                                       476   e-134
Glyma17g10360.1                                                       470   e-133
Glyma04g34610.1                                                       457   e-129
Glyma06g20040.1                                                       422   e-118
Glyma04g07780.1                                                       199   2e-51

>Glyma05g01530.1 
          Length = 715

 Score =  476 bits (1225), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 228/263 (86%), Positives = 238/263 (90%)

Query: 1   MWEFASVLNFLHLFRPLLNISLEFSAEEFETALLTPNDTLFHIHMPLLKAIPPVTRMALT 60
           MWEFASVLNF+HLFRPLLNISLEFSAEEFETALLTPN+TLFHIHMPLLKAIPP+TRMALT
Sbjct: 107 MWEFASVLNFMHLFRPLLNISLEFSAEEFETALLTPNETLFHIHMPLLKAIPPITRMALT 166

Query: 61  RDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLDPGVRVVILKALCDIRVEQE 120
           RDTWITVLCRKLRDWWHWVADGDLPIVASHG EIE YKSLDPGVRVVILKALCDIRVEQE
Sbjct: 167 RDTWITVLCRKLRDWWHWVADGDLPIVASHGVEIEEYKSLDPGVRVVILKALCDIRVEQE 226

Query: 121 DIRSYIDNSIKHGVQLSTFRKERIGGDSNGISYWYEDDPMIGHRLYREIRKTEVVQMKKG 180
           DIRSYIDNSIKHGVQLSTFRKERIGGDS+GISYWYEDDP+IGHRLYRE RKTEVVQMKKG
Sbjct: 227 DIRSYIDNSIKHGVQLSTFRKERIGGDSHGISYWYEDDPIIGHRLYREKRKTEVVQMKKG 286

Query: 181 KARGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTEALVGKKLKIDMLPEIEXXXX 240
           K RGSQVLS+TSYQWEAVATNFDEF+DVSEKLFSSKNRTEA +GKKLKIDMLPEIE    
Sbjct: 287 KPRGSQVLSNTSYQWEAVATNFDEFEDVSEKLFSSKNRTEASMGKKLKIDMLPEIEKVHK 346

Query: 241 XXXXXXXXXXXXXXXXDNYLVMD 263
                           +NYLV+D
Sbjct: 347 KKEKLLKKQHRQALLLENYLVVD 369


>Glyma17g10360.1 
          Length = 713

 Score =  470 bits (1210), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 224/263 (85%), Positives = 234/263 (88%)

Query: 1   MWEFASVLNFLHLFRPLLNISLEFSAEEFETALLTPNDTLFHIHMPLLKAIPPVTRMALT 60
           MWEFASVLNFLHLFRPLLNISLEFSAEEFETALL PNDTLFHIHMPLLKAIPP+TRMALT
Sbjct: 107 MWEFASVLNFLHLFRPLLNISLEFSAEEFETALLAPNDTLFHIHMPLLKAIPPITRMALT 166

Query: 61  RDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLDPGVRVVILKALCDIRVEQE 120
           RDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIE+YK LDPGVRVVILK LCDIRVEQE
Sbjct: 167 RDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEIYKLLDPGVRVVILKVLCDIRVEQE 226

Query: 121 DIRSYIDNSIKHGVQLSTFRKERIGGDSNGISYWYEDDPMIGHRLYREIRKTEVVQMKKG 180
           DIRSYIDNS+KHGVQLSTFRKERIGGDSNGISYWYEDDP+IGHR+YREIRKTEVVQMKKG
Sbjct: 227 DIRSYIDNSMKHGVQLSTFRKERIGGDSNGISYWYEDDPIIGHRMYREIRKTEVVQMKKG 286

Query: 181 KARGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTEALVGKKLKIDMLPEIEXXXX 240
           K RGS VLS+TSY WE +ATNFDEF+DVSEKLFSSKNRTE  VGK+LKIDMLPEIE    
Sbjct: 287 KPRGSLVLSNTSYLWEVIATNFDEFEDVSEKLFSSKNRTETSVGKRLKIDMLPEIEKVHK 346

Query: 241 XXXXXXXXXXXXXXXXDNYLVMD 263
                           DNYLV+D
Sbjct: 347 KKEKLLKKQHRQALLLDNYLVVD 369


>Glyma04g34610.1 
          Length = 737

 Score =  457 bits (1175), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 215/263 (81%), Positives = 231/263 (87%)

Query: 1   MWEFASVLNFLHLFRPLLNISLEFSAEEFETALLTPNDTLFHIHMPLLKAIPPVTRMALT 60
           MWE AS+LNFL+LFRPLLNIS+EFSAEEFETALLTPNDTL  IHMPLLKAIPP+TRMAL+
Sbjct: 119 MWELASILNFLNLFRPLLNISVEFSAEEFETALLTPNDTLGDIHMPLLKAIPPITRMALS 178

Query: 61  RDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLDPGVRVVILKALCDIRVEQE 120
           RDTWITVLCRKLRDWWHWVADGDLPIVASHGAE+EVYKSLDPGVRV+ILKALCDIRVEQE
Sbjct: 179 RDTWITVLCRKLRDWWHWVADGDLPIVASHGAEVEVYKSLDPGVRVIILKALCDIRVEQE 238

Query: 121 DIRSYIDNSIKHGVQLSTFRKERIGGDSNGISYWYEDDPMIGHRLYREIRKTEVVQMKKG 180
           DIR YID SIKHG+ LSTFRKERIGGDS+GISYWYEDD +IGHRLYREIRKTEVVQMKKG
Sbjct: 239 DIRGYIDRSIKHGIPLSTFRKERIGGDSHGISYWYEDDQIIGHRLYREIRKTEVVQMKKG 298

Query: 181 KARGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTEALVGKKLKIDMLPEIEXXXX 240
           K RGSQV S+T+YQWE VATNFDEFQDVSEKLF+SKNRTEA VGKK+KIDMLPEIE    
Sbjct: 299 KPRGSQVFSNTTYQWETVATNFDEFQDVSEKLFTSKNRTEASVGKKVKIDMLPEIEKVHR 358

Query: 241 XXXXXXXXXXXXXXXXDNYLVMD 263
                           DN+L +D
Sbjct: 359 RKEKLLKKQHRQALLLDNFLGVD 381


>Glyma06g20040.1 
          Length = 608

 Score =  422 bits (1085), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 205/263 (77%), Positives = 220/263 (83%), Gaps = 10/263 (3%)

Query: 1   MWEFASVLNFLHLFRPLLNISLEFSAEEFETALLTPNDTLFHIHMPLLKAIPPVTRMALT 60
           MWE AS+LNFL+LFRPLLNIS+EFSAEEFETALLTPNDTL  IH+PLLKAIPP+TRMAL+
Sbjct: 1   MWELASILNFLNLFRPLLNISVEFSAEEFETALLTPNDTLGDIHVPLLKAIPPITRMALS 60

Query: 61  RDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLDPGVRVVILKALCDIRVEQE 120
           RDTWITVLCRKLRDWW WVADGDLPIVASHG E+EVYKSLDPGVRVVILKALCDIRVEQE
Sbjct: 61  RDTWITVLCRKLRDWWQWVADGDLPIVASHGMEVEVYKSLDPGVRVVILKALCDIRVEQE 120

Query: 121 DIRSYIDNSIKHGVQLSTFRKERIGGDSNGISYWYEDDPMIGHRLYREIRKTEVVQMKKG 180
           DIR YID SIKHG+ LSTFRKERIGGDS+GISYW          LYREIRKTEVVQMKKG
Sbjct: 121 DIRGYIDRSIKHGIPLSTFRKERIGGDSHGISYW----------LYREIRKTEVVQMKKG 170

Query: 181 KARGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTEALVGKKLKIDMLPEIEXXXX 240
           K RGSQV S+T+YQWE VATNFDEFQDVSEKLF+SKNRTEA VGKK+KIDMLPEIE    
Sbjct: 171 KPRGSQVFSNTTYQWETVATNFDEFQDVSEKLFTSKNRTEASVGKKVKIDMLPEIEKVHK 230

Query: 241 XXXXXXXXXXXXXXXXDNYLVMD 263
                           DN+L +D
Sbjct: 231 RKEKLLKKQHRQALLLDNFLGVD 253


>Glyma04g07780.1 
          Length = 403

 Score =  199 bits (506), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 106/236 (44%), Positives = 150/236 (63%), Gaps = 5/236 (2%)

Query: 2   WEFASVLNFLHLFRPLLNISLEFSAEEFETALLTPNDTLFHIHMPLLKAIPPVTRMALTR 61
           WE ASVLNFL +F P+L   L  SAE+ E  L+ P+ +L  +H+ LLK IPPV++     
Sbjct: 33  WELASVLNFLDVFGPILGKDLNLSAEDIEIGLVKPDASLARLHIQLLKGIPPVSKTLEDS 92

Query: 62  DTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLDPGVRVVILKALCDIRVEQED 121
           D W+T LC+ L  WW WVA G++P+V S G EI  YK LDP  R+++LKALC++R +Q D
Sbjct: 93  DKWVTALCKNLTTWWPWVAKGEIPLVPSKGVEISKYKELDPLDRLLLLKALCEVRAQQHD 152

Query: 122 IRSYIDNSIKHGVQLSTFRKERIGGDSNGISYWYE-DDPMIGHRLYREIRKTEVVQMKKG 180
             SYI++++K G Q+STFRK+ +G D  G SYWY+       HRLYREI  ++ +   K 
Sbjct: 153 AVSYINDALKEGTQISTFRKDAVGRDGTGTSYWYDATSKGQSHRLYREIITSDSIPNDKD 212

Query: 181 KARGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTEALVGKKLKIDMLPEIE 236
           +    + LS  + QWE +A+N ++F  V+EK   SK+  E  V  KL+ D +P +E
Sbjct: 213 E----ECLSLPTIQWETLASNLEDFSKVAEKFAISKSAVEVAVSMKLQDDAIPALE 264