Miyakogusa Predicted Gene
- Lj4g3v1599240.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1599240.1 tr|B9GVE3|B9GVE3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_757323 PE=4
SV=1,49.53,1e-18,Dynein_light,Dynein light chain, type 1/2; no
description,Dynein light chain, type 1/2; seg,NULL; DL,CUFF.49445.1
(286 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g10320.1 284 9e-77
Glyma05g01580.1 256 2e-68
Glyma17g12490.1 135 4e-32
Glyma05g34910.1 124 2e-28
Glyma08g04800.1 122 4e-28
Glyma02g07720.1 122 5e-28
Glyma16g26790.1 120 1e-27
Glyma12g35200.1 89 6e-18
Glyma09g04830.1 86 4e-17
Glyma15g16050.1 86 5e-17
Glyma15g16060.1 85 7e-17
Glyma13g35300.1 85 9e-17
Glyma08g00340.1 82 7e-16
Glyma13g43410.1 82 8e-16
Glyma15g01900.1 82 9e-16
Glyma06g42180.1 80 3e-15
Glyma08g04230.1 80 3e-15
Glyma07g16690.1 65 6e-11
Glyma09g04820.1 61 1e-09
Glyma15g16060.2 54 1e-07
Glyma13g23750.1 54 2e-07
>Glyma17g10320.1
Length = 259
Score = 284 bits (726), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 161/260 (61%), Positives = 179/260 (68%), Gaps = 39/260 (15%)
Query: 43 PNPDLIHASKSSFLVKPFSSLNLSRNHHKQAQTKHSSSPLVHTLSQTKSMTPSAIVESSK 102
PNPDLI K SFLVK ++LNLS+ H + KHS PL+ T Q K++ + S
Sbjct: 21 PNPDLIQTYKPSFLVKHLTNLNLSQPHKTRPPQKHS--PLIDTHLQAKAIQE----KESS 74
Query: 103 YSLPKPNTTHNTVLAQKDHVKKTHKEKPS-----LMKNEKKDSIDRCVLVEDVK------ 151
++P VK+THKEKP L + E D D+ +VED K
Sbjct: 75 VTVP---------------VKRTHKEKPQRHCLKLERRELGDHNDKG-MVEDAKVVKGKP 118
Query: 152 KKIEKSKHDVV-----ERVSVS-LGKSGGRRRSFCGSQVDLGDVFAINGAKMVSADMPPF 205
+ KHDVV ER+SVS L GGRRRSFCG+Q +L DVFAINGAKMVS DMPPF
Sbjct: 119 RNPHLEKHDVVVVAAAERMSVSSLAPGGGRRRSFCGTQANLRDVFAINGAKMVSVDMPPF 178
Query: 206 MQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFL 265
MQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFL
Sbjct: 179 MQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFL 238
Query: 266 YFSMDQKLYILLFKTTVQKA 285
YFSMDQKLYILLFKT VQKA
Sbjct: 239 YFSMDQKLYILLFKTAVQKA 258
>Glyma05g01580.1
Length = 246
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 179/300 (59%), Gaps = 70/300 (23%)
Query: 1 MAHRSSQRRXXXXXXXXXXXXXXXXXXXTIFSASPSHHHYPKPNPDLIHASKSSFLVKPF 60
MAH SSQRR +A S+ P NPDLI K SFLVK
Sbjct: 1 MAHHSSQRRN--------------------LAAPESNPTTPNSNPDLIQTYKPSFLVKHL 40
Query: 61 SSLNLSRNHHKQAQTKHSSSPLVHTLSQTKSMTPSAIVESSKYSLPKPNTTHNTVLAQKD 120
++LNLS+ H + KHS PL+ T Q K+M SAI E ++P
Sbjct: 41 TNLNLSQTHKTRPPHKHS--PLIDTHLQAKAMATSAIQEKES-TVP-------------- 83
Query: 121 HVKKTHKEKP-----SLMKNEKKDSIDRCVLVEDVK------KKIEKSKHDVV----ERV 165
VK+THKEKP L + + D D+ +VED K + KHDVV ER+
Sbjct: 84 -VKRTHKEKPQRHCLELERRKLGDPNDKG-MVEDAKVVKGKPRNPHLEKHDVVVAAAERM 141
Query: 166 SVSLGKSGGRRRSFCGSQVDLGDVFAINGAKMVSADMPPFMQIHAVDCARKAIDSMEKFT 225
SVSL DVFAINGAKMVS DMPPFMQIHAVDCARKAIDSMEKFT
Sbjct: 142 SVSLAP----------------DVFAINGAKMVSVDMPPFMQIHAVDCARKAIDSMEKFT 185
Query: 226 SKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTTVQKA 285
SKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMD+KLYILLFKT V KA
Sbjct: 186 SKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDKKLYILLFKTAVHKA 245
>Glyma17g12490.1
Length = 176
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Query: 186 LGDVFAINGAKMVSADMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAW 245
L V A K++ +DMP FMQ+HA CAR+ DS+EKF++K +A ++KKEFD YGP W
Sbjct: 76 LSSVIAYLQVKVLVSDMPTFMQVHAFRCARRTYDSLEKFSAKLIAHNIKKEFDKAYGPVW 135
Query: 246 HCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTTVQKA 285
HCIVG++FGSFVTHS G FLYFSM+ LYILLFKT V+KA
Sbjct: 136 HCIVGSNFGSFVTHSTGCFLYFSMEN-LYILLFKTKVKKA 174
>Glyma05g34910.1
Length = 133
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 73/96 (76%), Gaps = 3/96 (3%)
Query: 193 NGAKMVSADMPPFMQIHAVDCARKAIDSM--EKFTSKTLALSLKKEFDGVYGPAWHCIVG 250
N ++ + DMP +Q A CAR +DSM +K SK LAL+LKKEFD YGPAWHCIVG
Sbjct: 37 NNVRVRACDMPLPLQSRAFRCARDLLDSMPPKKLDSKRLALTLKKEFDSSYGPAWHCIVG 96
Query: 251 TSFGSFVTHSVGGFLYFSMDQKLYILLFKTTVQKAD 286
TSFGS+VTHS+GGF+YFS+D K+Y+LLFKT V+ D
Sbjct: 97 TSFGSYVTHSLGGFVYFSID-KVYVLLFKTAVEPLD 131
>Glyma08g04800.1
Length = 133
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 72/96 (75%), Gaps = 3/96 (3%)
Query: 193 NGAKMVSADMPPFMQIHAVDCARKAIDSM--EKFTSKTLALSLKKEFDGVYGPAWHCIVG 250
N ++ + DMP +Q A CAR +DSM +K SK LAL+LKKEFD YGPAWHCIVG
Sbjct: 37 NNVRVRACDMPLPLQNRAFRCARDLLDSMPSKKLDSKRLALTLKKEFDTSYGPAWHCIVG 96
Query: 251 TSFGSFVTHSVGGFLYFSMDQKLYILLFKTTVQKAD 286
TSFGS+VTHS GGF+YFS+D K+Y+LLFKT V+ D
Sbjct: 97 TSFGSYVTHSFGGFVYFSID-KVYVLLFKTAVEPLD 131
>Glyma02g07720.1
Length = 133
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 69/91 (75%), Gaps = 4/91 (4%)
Query: 199 SADMPPFMQIHAVDCARKAIDSM---EKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGS 255
+ DMP +Q A CAR ++SM K SK LAL+LKKEFD YGPAWHCIVGTSFGS
Sbjct: 43 ACDMPLPLQNRAFQCARLYLESMPPANKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGS 102
Query: 256 FVTHSVGGFLYFSMDQKLYILLFKTTVQKAD 286
+VTHSVGGFLYFS+D K+YILLFKT V+ D
Sbjct: 103 YVTHSVGGFLYFSID-KVYILLFKTAVEPLD 132
>Glyma16g26790.1
Length = 130
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%), Gaps = 4/91 (4%)
Query: 199 SADMPPFMQIHAVDCARKAIDSM---EKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGS 255
+ DMP +Q A+ CAR ++SM K +K LAL+LKKEFD YGPAWHCIVGTSFGS
Sbjct: 40 ACDMPLPLQNRALQCARLHLESMPPGNKLDNKRLALALKKEFDSSYGPAWHCIVGTSFGS 99
Query: 256 FVTHSVGGFLYFSMDQKLYILLFKTTVQKAD 286
+VTHSVGGFLYFS+D K+YILLFKT V+ D
Sbjct: 100 YVTHSVGGFLYFSID-KVYILLFKTAVEPLD 129
>Glyma12g35200.1
Length = 152
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 184 VDLGDVFAINGAKMVSADMPPFMQIHAVDCARKAID----SMEKFTSKTLALSLKKEFDG 239
+ L + + ++ S+DMP MQ HA+ R K ++ +A +LKKEFD
Sbjct: 42 MRLASLAISSNVRLKSSDMPSHMQEHALRHTRSLFPLHHPPSPKPSNTLIARALKKEFDS 101
Query: 240 VYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTTV 282
YG AWHC++G SFGSFV+H+ GGF+YFS+D L +LLFKT V
Sbjct: 102 KYGLAWHCVIGKSFGSFVSHTGGGFIYFSIDS-LSVLLFKTEV 143
>Glyma09g04830.1
Length = 122
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 199 SADMPPFMQIHAVDCARKAIDSMEKFT-SKTLALSLKKEFDGVYGPAWHCIVGTSFGSFV 257
SADM P MQ AVD A + + EK+ K +A +KKEFD +GP WHCIVG +FGS+V
Sbjct: 43 SADMIPDMQKEAVDIA---VAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYV 99
Query: 258 THSVGGFLYFSMDQKLYILLFKT 280
TH F+YF +DQK +LLFK+
Sbjct: 100 THETNHFVYFYLDQKA-VLLFKS 121
>Glyma15g16050.1
Length = 122
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 199 SADMPPFMQIHAVDCARKAIDSMEKF-TSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFV 257
SADM P MQ AVD A + + EK+ K +A +KKEFD +GP WHCIVG +FGS+V
Sbjct: 43 SADMIPDMQKEAVDIA---VAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYV 99
Query: 258 THSVGGFLYFSMDQKLYILLFKT 280
TH F+YF +DQK +LLFK+
Sbjct: 100 THETNHFVYFYLDQKA-VLLFKS 121
>Glyma15g16060.1
Length = 118
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 199 SADMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVT 258
SADM P MQ AVD A A + K +A +KKEFD +GP WHCIVG +FGS+VT
Sbjct: 39 SADMIPDMQKEAVDIAVAAFERYN--VEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVT 96
Query: 259 HSVGGFLYFSMDQKLYILLFKT 280
H F+YF +DQK +LLFK+
Sbjct: 97 HETNHFVYFYLDQKA-VLLFKS 117
>Glyma13g35300.1
Length = 142
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 195 AKMVSADMPPFMQIHAVDCARKAI----DSMEKFTSKTLALSLKKEFDGVYGPAWHCIVG 250
++ S+ MP MQ HA+ R K ++ +A +LKKEFD YG AWHC++G
Sbjct: 43 VRLKSSHMPLHMQEHALRHTRSLFLLHHPPSPKPSNTLIARALKKEFDSKYGLAWHCVIG 102
Query: 251 TSFGSFVTHSVGGFLYFSMDQKLYILLFKTTVQ 283
SFGSFV+H+ GGF+YFS+D L +LLFKT V
Sbjct: 103 NSFGSFVSHTGGGFIYFSIDS-LSVLLFKTEVH 134
>Glyma08g00340.1
Length = 60
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 235 KEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTTVQKA 285
+EFD YGP WHCIVG++FGSFVTHS G FLYFSM+ LYILLFKT V+KA
Sbjct: 9 QEFDKAYGPVWHCIVGSNFGSFVTHSTGCFLYFSMEN-LYILLFKTKVKKA 58
>Glyma13g43410.1
Length = 95
Score = 81.6 bits (200), Expect = 8e-16, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 201 DMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHS 260
DMP MQI A+ A +A+D + F ++A +KKEFD YG W C+VG+SFG F THS
Sbjct: 12 DMPDKMQIQAMASAYEALDLYDVFDCTSIAAHIKKEFDTKYGSGWQCVVGSSFGCFFTHS 71
Query: 261 VGGFLYFSMDQKLYILLFK 279
G F+YF++ + L L+FK
Sbjct: 72 KGTFVYFTL-ETLNFLIFK 89
>Glyma15g01900.1
Length = 95
Score = 81.6 bits (200), Expect = 9e-16, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 195 AKMVSADMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFG 254
A + DMP MQI A+ A +A+D + F ++A +KKEFD YG W C+VG+SFG
Sbjct: 6 AVIEDTDMPDKMQIQAMASASEALDLYDVFDCTSIAAHIKKEFDTKYGSGWQCVVGSSFG 65
Query: 255 SFVTHSVGGFLYFSMDQKLYILLFK 279
F THS G F+YF++ + L L+FK
Sbjct: 66 CFFTHSKGTFVYFTL-ETLNFLIFK 89
>Glyma06g42180.1
Length = 109
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 201 DMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHS 260
DM MQ A+D A KA+D + + +A +KKEFD ++GP W CIVGT FGSFVTH
Sbjct: 12 DMLQTMQQDAMDLASKALDFFDVTEAIKIARFIKKEFDRMHGPGWQCIVGTDFGSFVTHC 71
Query: 261 VGGFLYFSMDQKLYILLFK 279
G F+YF + L ILLF+
Sbjct: 72 CGCFIYFCLGN-LAILLFR 89
>Glyma08g04230.1
Length = 93
Score = 79.7 bits (195), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 192 INGAKMV-SADMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVG 250
+ G MV DM MQIHA+ A +A+D + + ++A +KKEFD VYG W C+VG
Sbjct: 2 LEGKAMVKETDMSTKMQIHAMASASQALDLYDVYDCISIAAHIKKEFDSVYGNGWQCVVG 61
Query: 251 TSFGSFVTHSVGGFLYFSMDQKLYILLFKTT 281
++FG + THS G F+YF++ L L+FK T
Sbjct: 62 SNFGCYFTHSSGTFIYFAL-ATLNFLIFKGT 91
>Glyma07g16690.1
Length = 130
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 201 DMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHS 260
DMP MQ + ++ A +A+D+ E +++A +K++ D YGPAW+ +VG FGS +TH
Sbjct: 30 DMPEGMQSYVMELAHQALDAHEVSDCQSIAHFIKQKLDEAYGPAWNSVVGKDFGSCITHL 89
Query: 261 VGGFLYFSMDQKLYILLFK 279
G F++F ++ + L+FK
Sbjct: 90 CGSFIFFRVEM-MEFLIFK 107
>Glyma09g04820.1
Length = 121
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 199 SADMPPFMQIHAVDCARKAIDSMEKF-TSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFV 257
SADM P MQ AVD A + + EK+ K +A +KKEFD +GP WHCIVG +FG+F
Sbjct: 39 SADMIPDMQKEAVDIA---VAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGNFF 95
Query: 258 TH-SVGGFLYFSMDQKLYILLFKT 280
V F + +I LF +
Sbjct: 96 LFIIVNDFFTWVYSDLWFISLFSS 119
>Glyma15g16060.2
Length = 107
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 199 SADMPPFMQIHAVDCARKAIDSMEKF-TSKTLALSLKKEFDGVYGPAWHCIVGTSF 253
SADM P MQ AVD A + + E++ K +A +KKEFD +GP WHCIVG +F
Sbjct: 39 SADMIPDMQKEAVDIA---VAAFERYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNF 91
>Glyma13g23750.1
Length = 193
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 186 LGDVFAINGAKMVSADMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKK 235
L V A K++ +DMP FMQ+HA CAR+ DS+EKF++K +A ++KK
Sbjct: 144 LSSVIAYLQVKVLVSDMPSFMQVHAFRCARRTYDSLEKFSAKHIAHNIKK 193