Miyakogusa Predicted Gene

Lj4g3v1561710.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1561710.2 tr|A9S692|A9S692_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_75128
,34.69,1e-18,seg,NULL,CUFF.49416.2
         (351 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g01740.1                                                       265   6e-71
Glyma17g10150.1                                                       261   7e-70
Glyma17g10150.2                                                       233   2e-61
Glyma06g38910.1                                                        67   2e-11
Glyma06g39310.1                                                        67   4e-11
Glyma0060s00290.1                                                      65   1e-10
Glyma04g10580.1                                                        60   3e-09
Glyma0060s00250.1                                                      60   3e-09
Glyma06g38850.1                                                        60   3e-09
Glyma06g39270.1                                                        60   3e-09
Glyma06g38810.1                                                        59   7e-09
Glyma06g38840.1                                                        59   8e-09
Glyma13g16030.1                                                        56   5e-08
Glyma06g39240.1                                                        54   4e-07
Glyma06g39370.1                                                        53   4e-07
Glyma0060s00340.1                                                      52   9e-07
Glyma06g39300.1                                                        52   9e-07
Glyma06g39500.1                                                        52   1e-06

>Glyma05g01740.1 
          Length = 303

 Score =  265 bits (677), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 135/163 (82%), Positives = 145/163 (88%), Gaps = 2/163 (1%)

Query: 190 RGKGREMAKENTAGVVDYAKLIRGYDNMSAAERVKAKMKLQLSETAAKDSEKGAGWERFE 249
           RGK  E  K   A + DY+KLI+GYD MS+AERVKAKMKLQLSET A+DSEKG GWERFE
Sbjct: 142 RGKVSETKKGKNAEI-DYSKLIQGYDRMSSAERVKAKMKLQLSETVAQDSEKGVGWERFE 200

Query: 250 FNKDAPLDDEEFEVAEDDGSLVKHIGQSFRFSAVEAKREERIQAAHEEAMFGASALPPPI 309
           FNKDAPLDDEE EVAEDD SLVKHIGQSFRFSAVEA+REE+IQAAHEEAMFGA+AL PP 
Sbjct: 201 FNKDAPLDDEEVEVAEDDASLVKHIGQSFRFSAVEARREEQIQAAHEEAMFGATALLPPT 260

Query: 310 NTDSEPEREDE-EADKKELVTSLLSETVLAKQKGSWRDRVRQA 351
           +TDSEPERE+E EADKKELV SLLSETVLAKQKGSWRDRVRQA
Sbjct: 261 STDSEPERENEKEADKKELVASLLSETVLAKQKGSWRDRVRQA 303



 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 47/83 (56%), Gaps = 15/83 (18%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAA-DVPXXXXXXXXXXXXXXXXXXXXX 59
          MEEEKAAAYYDEL RKGEGAARFKQGLGFSSSA   DVP                     
Sbjct: 1  MEEEKAAAYYDELARKGEGAARFKQGLGFSSSAPNDDVP--------------KPSSSFL 46

Query: 60 XXXXXXXXXXDKKAQLQSIQNKL 82
                    +K+AQLQSI +KL
Sbjct: 47 SKFVKASSESEKQAQLQSIHDKL 69


>Glyma17g10150.1 
          Length = 300

 Score =  261 bits (668), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 133/164 (81%), Positives = 143/164 (87%), Gaps = 2/164 (1%)

Query: 189 DRGKGREMAKENTAGVVDYAKLIRGYDNMSAAERVKAKMKLQLSETAAKDSEKGAGWERF 248
           DRGK  E  K   A + DY KLI GYD MS+AERVKAKMKLQLSETAA+DSEKG GWERF
Sbjct: 138 DRGKVSETKKRKNAEI-DYYKLIPGYDRMSSAERVKAKMKLQLSETAAQDSEKGEGWERF 196

Query: 249 EFNKDAPLDDEEFEVAEDDGSLVKHIGQSFRFSAVEAKREERIQAAHEEAMFGASALPPP 308
           EFNKDAPLDDEE EVAEDD SLVKHIGQSFRFSAV+A+REE+IQAAHEEAMFGA+AL PP
Sbjct: 197 EFNKDAPLDDEEVEVAEDDASLVKHIGQSFRFSAVKARREEQIQAAHEEAMFGATALLPP 256

Query: 309 INTDSEPEREDE-EADKKELVTSLLSETVLAKQKGSWRDRVRQA 351
            +TDSEPER++E E DKKELVTSLLSETVLAKQ GSWRDRVRQ 
Sbjct: 257 TSTDSEPERDNEKETDKKELVTSLLSETVLAKQNGSWRDRVRQT 300



 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 49/86 (56%), Gaps = 12/86 (13%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAA-DVPXXXXXXXXXXXXXXXXXXXXX 59
          MEEEKAAAYYDEL+RKGEGAARFKQGLGFSSSA   DVP                     
Sbjct: 1  MEEEKAAAYYDELSRKGEGAARFKQGLGFSSSAPNDDVP-----------KPSSFLSKFV 49

Query: 60 XXXXXXXXXXDKKAQLQSIQNKLNIK 85
                    +K+AQLQSI +KL  K
Sbjct: 50 KASSTAPSNSEKQAQLQSIHHKLKKK 75


>Glyma17g10150.2 
          Length = 295

 Score =  233 bits (595), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 120/149 (80%), Positives = 130/149 (87%), Gaps = 2/149 (1%)

Query: 189 DRGKGREMAKENTAGVVDYAKLIRGYDNMSAAERVKAKMKLQLSETAAKDSEKGAGWERF 248
           DRGK  E  K   A + DY KLI GYD MS+AERVKAKMKLQLSETAA+DSEKG GWERF
Sbjct: 138 DRGKVSETKKRKNAEI-DYYKLIPGYDRMSSAERVKAKMKLQLSETAAQDSEKGEGWERF 196

Query: 249 EFNKDAPLDDEEFEVAEDDGSLVKHIGQSFRFSAVEAKREERIQAAHEEAMFGASALPPP 308
           EFNKDAPLDDEE EVAEDD SLVKHIGQSFRFSAV+A+REE+IQAAHEEAMFGA+AL PP
Sbjct: 197 EFNKDAPLDDEEVEVAEDDASLVKHIGQSFRFSAVKARREEQIQAAHEEAMFGATALLPP 256

Query: 309 INTDSEPEREDE-EADKKELVTSLLSETV 336
            +TDSEPER++E E DKKELVTSLLSETV
Sbjct: 257 TSTDSEPERDNEKETDKKELVTSLLSETV 285



 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 49/86 (56%), Gaps = 12/86 (13%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAA-DVPXXXXXXXXXXXXXXXXXXXXX 59
          MEEEKAAAYYDEL+RKGEGAARFKQGLGFSSSA   DVP                     
Sbjct: 1  MEEEKAAAYYDELSRKGEGAARFKQGLGFSSSAPNDDVP-----------KPSSFLSKFV 49

Query: 60 XXXXXXXXXXDKKAQLQSIQNKLNIK 85
                    +K+AQLQSI +KL  K
Sbjct: 50 KASSTAPSNSEKQAQLQSIHHKLKKK 75


>Glyma06g38910.1 
          Length = 177

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/33 (96%), Positives = 33/33 (100%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSA 33
          MEEEKAAAYYDELT+KGEGAARFKQGLGFSSSA
Sbjct: 1  MEEEKAAAYYDELTQKGEGAARFKQGLGFSSSA 33


>Glyma06g39310.1 
          Length = 91

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/36 (91%), Positives = 33/36 (91%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAAD 36
          MEEEKAAAYYDELTRKGE AARFKQGLGFSSSA  D
Sbjct: 1  MEEEKAAAYYDELTRKGERAARFKQGLGFSSSAPND 36


>Glyma0060s00290.1 
          Length = 75

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 45/86 (52%), Gaps = 15/86 (17%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAA-DVPXXXXXXXXXXXXXXXXXXXXX 59
          MEEEKA AYYDELT KGE AARFKQ LGFSSSA   DVP                     
Sbjct: 1  MEEEKAGAYYDELTCKGERAARFKQCLGFSSSAPNDDVPKPSSSFLSKFFKASSESK--- 57

Query: 60 XXXXXXXXXXDKKAQLQSIQNKLNIK 85
                     K+AQLQSI +KLN K
Sbjct: 58 -----------KQAQLQSIHDKLNKK 72


>Glyma04g10580.1 
          Length = 130

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/33 (84%), Positives = 31/33 (93%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSA 33
          MEEEKAA YYD+LTRKG+ AARFKQG+GFSSSA
Sbjct: 1  MEEEKAATYYDKLTRKGKRAARFKQGVGFSSSA 33


>Glyma0060s00250.1 
          Length = 72

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 41/81 (50%), Gaps = 13/81 (16%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAADVPXXXXXXXXXXXXXXXXXXXXXX 60
          MEEEKAAAYY+ELTRKGE AARFKQGL FSS A  D                        
Sbjct: 1  MEEEKAAAYYNELTRKGERAARFKQGLDFSSLAPND-------------DVAKPSSSFLS 47

Query: 61 XXXXXXXXXDKKAQLQSIQNK 81
                    K+AQLQSI NK
Sbjct: 48 KFVKASSESKKQAQLQSIHNK 68


>Glyma06g38850.1 
          Length = 126

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/36 (83%), Positives = 32/36 (88%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAAD 36
          MEEEKAAAYYD++TRKGE AARFKQGL FSSSA  D
Sbjct: 1  MEEEKAAAYYDKVTRKGERAARFKQGLEFSSSAPND 36


>Glyma06g39270.1 
          Length = 112

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/36 (83%), Positives = 31/36 (86%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAAD 36
          MEEEKA AYYDELTRKGE AAR K+GLGFSSSA  D
Sbjct: 1  MEEEKAVAYYDELTRKGERAARVKRGLGFSSSAPND 36


>Glyma06g38810.1 
          Length = 112

 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 41/83 (49%), Gaps = 15/83 (18%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAAD-VPXXXXXXXXXXXXXXXXXXXXX 59
          MEEEKA AYYDE TRKGE A RFKQGL FSSS   D VP                     
Sbjct: 1  MEEEKAVAYYDEKTRKGERATRFKQGLDFSSSTPNDNVPKHSSSFLSKFVKASSESK--- 57

Query: 60 XXXXXXXXXXDKKAQLQSIQNKL 82
                     K+AQLQSI ++L
Sbjct: 58 -----------KQAQLQSIHDQL 69


>Glyma06g38840.1 
          Length = 89

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/36 (83%), Positives = 31/36 (86%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAAD 36
          MEEEKAAAY DELT KGE AARFKQGLGFSS+A  D
Sbjct: 1  MEEEKAAAYDDELTHKGERAARFKQGLGFSSAAPND 36


>Glyma13g16030.1 
          Length = 101

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 32/38 (84%), Gaps = 1/38 (2%)

Query: 2  EEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAAD-VP 38
          EEEK AAY++ELTRKGE AARFKQGL FSSSA  D VP
Sbjct: 1  EEEKVAAYFNELTRKGERAARFKQGLDFSSSAPNDNVP 38


>Glyma06g39240.1 
          Length = 180

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/39 (71%), Positives = 28/39 (71%), Gaps = 1/39 (2%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAA-DVP 38
          MEEEK    YDELT KGE  A FKQGLGFSSSA   DVP
Sbjct: 1  MEEEKVVPNYDELTCKGETTAWFKQGLGFSSSAPKDDVP 39


>Glyma06g39370.1 
          Length = 145

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 1/39 (2%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAA-DVP 38
          MEEEKAA++ DELT KGE AA FKQGLGFSSSA   D+P
Sbjct: 1  MEEEKAASHGDELTCKGERAAMFKQGLGFSSSAPNDDIP 39


>Glyma0060s00340.1 
          Length = 114

 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/39 (71%), Positives = 32/39 (82%), Gaps = 1/39 (2%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAA-DVP 38
          MEEEKAA++ DELT KGE AA F+QGLGFSSSA   D+P
Sbjct: 1  MEEEKAASHGDELTCKGERAAMFEQGLGFSSSAPNDDIP 39


>Glyma06g39300.1 
          Length = 181

 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/39 (71%), Positives = 29/39 (74%), Gaps = 1/39 (2%)

Query: 1  MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAAA-DVP 38
          MEEEKA   YDELT KGE A  F+QGLGFSSSA   DVP
Sbjct: 1  MEEEKAVPNYDELTCKGERAVWFRQGLGFSSSAPKDDVP 39


>Glyma06g39500.1 
          Length = 248

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/39 (74%), Positives = 31/39 (79%), Gaps = 1/39 (2%)

Query: 1   MEEEKAAAYYDELTRKGEGAARFKQGLGFSSSAA-ADVP 38
           MEEEKAA + DELT KGE AARFKQGL FSSS+   DVP
Sbjct: 68  MEEEKAAPHDDELTCKGERAARFKQGLSFSSSSPNNDVP 106