Miyakogusa Predicted Gene

Lj4g3v1561630.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1561630.1 tr|B9IFA6|B9IFA6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_666660 PE=4 SV=1,55.26,0.0001,
,CUFF.49418.1
         (67 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g17040.1                                                        50   4e-07

>Glyma08g17040.1 
          Length = 659

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/40 (52%), Positives = 29/40 (72%)

Query: 28  TNFETSLCMRNMILLIHVRYGFMLDAHKLFDDIPERDVVS 67
           + FE  L + N +L +HV+ G MLDA KLFD++PE+DV S
Sbjct: 147 SGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVAS 186