Miyakogusa Predicted Gene

Lj4g3v1535080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1535080.1 Non Chatacterized Hit- tr|K4C8K9|K4C8K9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,48.12,3e-19,NHL
REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT NAMED,NULL,CUFF.49357.1
         (144 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g09910.1                                                       181   2e-46
Glyma05g02010.1                                                       142   1e-34
Glyma04g35180.1                                                       122   1e-28
Glyma06g19600.1                                                       108   2e-24
Glyma13g22540.1                                                        70   8e-13
Glyma15g24130.1                                                        66   1e-11
Glyma09g12860.1                                                        65   3e-11
Glyma17g11340.1                                                        62   2e-10
Glyma06g06900.1                                                        54   4e-08

>Glyma17g09910.1 
          Length = 159

 Score =  181 bits (459), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/159 (63%), Positives = 117/159 (73%), Gaps = 16/159 (10%)

Query: 1   MSIELESEST-TPTGH--QRSNAFCF------CFGPRRRSSWWQRVRT-SHST--VSGDR 48
           MSIEL+SES  TPT     RSN+ C       C GPRRRSSWW+RVR+ SHST   +GDR
Sbjct: 1   MSIELDSESIPTPTAQAQDRSNSRCALLFSYSCLGPRRRSSWWERVRSHSHSTPASTGDR 60

Query: 49  WWSRGIRALKKVREWSEILAGPRWKTFIRRLSHHRSHKRMTKYQYDPFSYALNFDEGQNG 108
           WWSRG+RALKK+REWSEI+AGP+WKTFIRR + +R +KR+  YQYDPFSYALNFDEG NG
Sbjct: 61  WWSRGLRALKKLREWSEIVAGPKWKTFIRRFNRNRPNKRIPTYQYDPFSYALNFDEGPNG 120

Query: 109 DFPDD---GFRNFSTRYAVA-AVKPVSSPEKGSDVAVLC 143
           DF DD     RNFSTRYA A  VK +S   + +D AVL 
Sbjct: 121 DFNDDDDAALRNFSTRYAAANNVKSLSPKARDTDDAVLV 159


>Glyma05g02010.1 
          Length = 114

 Score =  142 bits (358), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/112 (66%), Positives = 86/112 (76%), Gaps = 7/112 (6%)

Query: 30  RSSWWQRVRT-SHST--VSGDRWWSRGIRALKKVREWSEILAGPRWKTFIRRLSHHRSHK 86
           RSSWW+RVR+ SHS    +GDRWWSRG+RALKK+REWSEI+AGP+WKTFIRR + +R +K
Sbjct: 1   RSSWWERVRSHSHSAPASAGDRWWSRGLRALKKLREWSEIVAGPKWKTFIRRFNRNRPNK 60

Query: 87  RMTKYQYDPFSYALNFDEGQNGDF----PDDGFRNFSTRYAVAAVKPVSSPE 134
           R+  YQYDPFSYALNFDEG NGDF     D   RNFSTRYA A      SP+
Sbjct: 61  RIPTYQYDPFSYALNFDEGPNGDFNHHHDDAALRNFSTRYAAANNVKSLSPK 112


>Glyma04g35180.1 
          Length = 178

 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/175 (50%), Positives = 99/175 (56%), Gaps = 35/175 (20%)

Query: 2   SIELESESTTPTGHQRSN--------AFCF--CFGPRRRSS-----WWQRVRTSHS---- 42
           S + E   +T  G +RSN        +FCF  CFG RR S+     WW+RVR + S    
Sbjct: 4   SQQNELHYSTANGDERSNPCLANTRCSFCFPCCFGSRRDSATLGFGWWERVRATSSWSES 63

Query: 43  --------TVSGDRWWSRGIRALKKVREWSEILAGPRWKTFIRRLSHHR---SHKRMTKY 91
                      G RWWS G+RA  KVREWSE+ AGPRWKTFIRR S  R   S     KY
Sbjct: 64  RSEAQPVTGSPGGRWWSGGVRAFMKVREWSELAAGPRWKTFIRRFSRSRSGGSRHAAGKY 123

Query: 92  QYDPFSYALNFDEGQN---GDFPDDGFRNFSTRYAV-AAVKPVSSPEKGSDVAVL 142
           QYDP SYALNFDEG N   GD   DG RNFSTRYA    +K VSS +   DVAVL
Sbjct: 124 QYDPLSYALNFDEGHNGDFGDDGYDGLRNFSTRYAAPPPIKSVSS-DSNQDVAVL 177


>Glyma06g19600.1 
          Length = 179

 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 92/168 (54%), Gaps = 37/168 (22%)

Query: 11  TPTGHQRSNA--------FCF--CFGPRRRS-----SWWQRVRTSHS------------- 42
           T  G +RSN+        FCF  CFG R  S     +WW+RVR + S             
Sbjct: 12  TGDGEERSNSLLANTRCSFCFPCCFGSRCHSVSVGFAWWERVRATSSWSETSPHSEAQPA 71

Query: 43  -TVSGDRWWSRGIRALKKVREWSEILAGPRWKTFIRRLSHHRS---HKRMTKYQYDPFSY 98
              S   WWS G+RA  KVREWSE+ AGPRWKTFIRR S  RS        KYQYDP SY
Sbjct: 72  TGSSSGSWWSGGVRAFMKVREWSELAAGPRWKTFIRRFSRSRSGWARHAAGKYQYDPLSY 131

Query: 99  ALNFDEGQNGDFPDDGF---RNFSTRYAV-AAVKPVSSPEKGSDVAVL 142
           +LNFDEG NG F  DG+   RNFS RYA     KPVSS +   D AVL
Sbjct: 132 SLNFDEGHNGYFDGDGYDGLRNFSARYAAPPPFKPVSS-DSIQDAAVL 178


>Glyma13g22540.1 
          Length = 141

 Score = 70.1 bits (170), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 17/116 (14%)

Query: 18  SNAFCFCFGPRRRSSWWQRVRTSHSTV------SGDRWWSRGIRALKKVREWSEILAGPR 71
           S   C CFG ++   WWQ        +       G+ W    +  L+K +E SE++AGP+
Sbjct: 26  SGCGCGCFGLKK---WWQGHEEEGKGLLVDQKGEGESWV---VEKLRKAKEVSEVIAGPK 79

Query: 72  WKTFIRRLSHH--RSHKRMTKYQYDPFSYALNFDEGQNGDFPDDGF-RNFSTRYAV 124
           WKTFIR++S +  +  ++  ++QYD  SYALNF+ G   +  D+G   +FS+R+A 
Sbjct: 80  WKTFIRKISGYGKKVKQQRNRFQYDEHSYALNFNSGAQSE--DEGMPHSFSSRFAA 133


>Glyma15g24130.1 
          Length = 140

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 50/69 (72%), Gaps = 2/69 (2%)

Query: 57  LKKVREWSEILAGPRWKTFIRRLS-HHRSHKRMTKYQYDPFSYALNFDEGQNGDFPDDGF 115
           L+K++E+SE++AGP+WKTFIR++S + R  ++  ++QYD  SYALNF+ G   +  DD  
Sbjct: 63  LRKIKEFSEVIAGPKWKTFIRKISGYGRKQQQKNRFQYDEHSYALNFNSGDKSE-DDDTP 121

Query: 116 RNFSTRYAV 124
            +FS R++ 
Sbjct: 122 PSFSARFSA 130


>Glyma09g12860.1 
          Length = 144

 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 3/70 (4%)

Query: 57  LKKVREWSEILAGPRWKTFIRRLSHH--RSHKRMTKYQYDPFSYALNFDEGQNGDFPDDG 114
           L+K++E+SE++AGP+WKTFIR++S +  +  ++  ++QYD  SYALNF+ G   +  DD 
Sbjct: 65  LRKIKEFSEVIAGPKWKTFIRKISGYGRKQQQQKNRFQYDEHSYALNFNSGAQSE-DDDM 123

Query: 115 FRNFSTRYAV 124
             +FS R++ 
Sbjct: 124 PPSFSARFSA 133


>Glyma17g11340.1 
          Length = 140

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 15/112 (13%)

Query: 22  CFCFGPRRRSSWWQRVRTSHSTV-----SGDRWWSRGIRALKKVREWSEILAGPRWKTFI 76
           C CF       WWQ        +      G+ W    +  L+K +E SE++AGP+WKTFI
Sbjct: 27  CGCFRCFSLKKWWQGYEEEGKGLLDQKGEGESWV---VNKLRKAKEVSEVIAGPKWKTFI 83

Query: 77  RRLSHH--RSHKRMTKYQYDPFSYALNFD-EGQNGDFPDDGF-RNFSTRYAV 124
           R++S +  +   +  ++QYD  SYALNF+ E Q     D+G   +FS+R+A 
Sbjct: 84  RKISGYGKKVKYQRNRFQYDEHSYALNFNSEAQR---EDEGMPHSFSSRFAA 132


>Glyma06g06900.1 
          Length = 138

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 9/110 (8%)

Query: 19  NAFCFCFGPRRRSSWWQRVRTSHSTVSGDRWWSRGIRALKKVREWSEILAGPRWKTFIRR 78
           N F   + P+    +  R     +     +W  + +    KV   SEIL  P+    +RR
Sbjct: 16  NCFRVLYAPQGPHRYESRGEEQETLEIRRKWLRKKLERAMKV--LSEILVWPKKSFSLRR 73

Query: 79  L----SHHRSHKRMTKYQYDPFSYALNFDEGQNGDFPDDG-FRNFSTRYA 123
           L    S  +  KR  ++QYDP SYALNFD+G   +  DDG F +FS RYA
Sbjct: 74  LRTCISEAKEMKRKMQFQYDPKSYALNFDDGSIEE--DDGVFLDFSARYA 121