Miyakogusa Predicted Gene

Lj4g3v1534940.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1534940.2 Non Chatacterized Hit- tr|J3LYP7|J3LYP7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,39.1,0.00000000000001,seg,NULL,CUFF.49349.2
         (143 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g02030.1                                                       179   6e-46
Glyma17g09880.1                                                       178   2e-45

>Glyma05g02030.1 
          Length = 220

 Score =  179 bits (455), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 94/133 (70%), Positives = 105/133 (78%)

Query: 1   MPGPGPHLMYAMGSGLALTTSTNGRFSPHHTLFYTVNSFFGPDIGSFSEWLGSLLGGPAD 60
           MPGPGPHLMYAMGSGL LT+ +NGRFSPHHTLFYT+N+FFGPD+GSF+EWLGSL GG A 
Sbjct: 1   MPGPGPHLMYAMGSGLCLTSISNGRFSPHHTLFYTINAFFGPDVGSFTEWLGSLFGGSAH 60

Query: 61  TVGSAVADXXXXXXXXXXXXGFPLCVLYSWISAFLIQRHLLDSVSRVPLTRMQCFYLISA 120
             GSA+ D            G PL  LYS IS++L+   LLDS+SRVPLTRMQCF LISA
Sbjct: 61  AFGSALEDLTHHPLFYILLLGLPLSFLYSRISSYLLHTQLLDSLSRVPLTRMQCFLLISA 120

Query: 121 GSFTHFFLDHLFE 133
           GSFTHFFLDHLFE
Sbjct: 121 GSFTHFFLDHLFE 133


>Glyma17g09880.1 
          Length = 250

 Score =  178 bits (451), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 93/133 (69%), Positives = 105/133 (78%)

Query: 1   MPGPGPHLMYAMGSGLALTTSTNGRFSPHHTLFYTVNSFFGPDIGSFSEWLGSLLGGPAD 60
           MPGPGPHLMYAMGSGL LT+ +NGRF PHHTLFYT+N+FFGPD+GSF+EWLGSL GG A 
Sbjct: 1   MPGPGPHLMYAMGSGLCLTSISNGRFGPHHTLFYTINAFFGPDVGSFTEWLGSLFGGSAH 60

Query: 61  TVGSAVADXXXXXXXXXXXXGFPLCVLYSWISAFLIQRHLLDSVSRVPLTRMQCFYLISA 120
            +GS++ D            G PL  LYS IS++L+   LLDSVSRVPLTRMQCF LISA
Sbjct: 61  ALGSSLEDLIHHPFFYILLLGLPLSFLYSRISSYLLHTQLLDSVSRVPLTRMQCFLLISA 120

Query: 121 GSFTHFFLDHLFE 133
           GSFTHFFLDHLFE
Sbjct: 121 GSFTHFFLDHLFE 133