Miyakogusa Predicted Gene

Lj4g3v1534940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1534940.1 Non Chatacterized Hit- tr|G7JNT5|G7JNT5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,79.77,0,seg,NULL,CUFF.49349.1
         (262 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g09880.1                                                       345   3e-95
Glyma05g02030.1                                                       301   5e-82
Glyma17g32440.1                                                        59   6e-09

>Glyma17g09880.1 
          Length = 250

 Score =  345 bits (884), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 180/262 (68%), Positives = 196/262 (74%), Gaps = 12/262 (4%)

Query: 1   MPGPGPHLMYAMGSGLALTTSTNGRFSPHHTLFYTVNSFFGPDIGSFSEWLGSLLGGPAD 60
           MPGPGPHLMYAMGSGL LT+ +NGRF PHHTLFYT+N+FFGPD+GSF+EWLGSL GG A 
Sbjct: 1   MPGPGPHLMYAMGSGLCLTSISNGRFGPHHTLFYTINAFFGPDVGSFTEWLGSLFGGSAH 60

Query: 61  TVGSAVADXXXXXXXXXXXXGFPLCVLYSWISAFLIQRHLLDSVSRVPLTRMQCFYLISA 120
            +GS++ D            G PL  LYS IS++L+   LLDSVSRVPLTRMQCF LISA
Sbjct: 61  ALGSSLEDLIHHPFFYILLLGLPLSFLYSRISSYLLHTQLLDSVSRVPLTRMQCFLLISA 120

Query: 121 GSFTHFFLDHLFEENGKTTTYTWILSTGWWQGRAPVNPDAVVVVGFLCVCLIGGFFYLNR 180
           GSFTHFFLDHLFEENGKTTTYTWILSTGWWQ RAPVNPDAVVVV FLC CLIGGFFYLNR
Sbjct: 121 GSFTHFFLDHLFEENGKTTTYTWILSTGWWQSRAPVNPDAVVVVVFLCACLIGGFFYLNR 180

Query: 181 ANSSNXXXXXXXXXXXXXXXXXXXYCLWCSIQIYWINPRRPAVGEEADLGVLVFLALYFF 240
           AN+SN                   YCLWC+IQIYWI+P RPAV            A+YFF
Sbjct: 181 ANASNSMMKKSYQSMLLVMSIACLYCLWCAIQIYWISPPRPAV------------AIYFF 228

Query: 241 LPYSLCIMSMYPKDHDTNQIPL 262
           LPY LCIMSM PKDHD NQIPL
Sbjct: 229 LPYGLCIMSMSPKDHDPNQIPL 250


>Glyma05g02030.1 
          Length = 220

 Score =  301 bits (771), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 154/219 (70%), Positives = 168/219 (76%)

Query: 1   MPGPGPHLMYAMGSGLALTTSTNGRFSPHHTLFYTVNSFFGPDIGSFSEWLGSLLGGPAD 60
           MPGPGPHLMYAMGSGL LT+ +NGRFSPHHTLFYT+N+FFGPD+GSF+EWLGSL GG A 
Sbjct: 1   MPGPGPHLMYAMGSGLCLTSISNGRFSPHHTLFYTINAFFGPDVGSFTEWLGSLFGGSAH 60

Query: 61  TVGSAVADXXXXXXXXXXXXGFPLCVLYSWISAFLIQRHLLDSVSRVPLTRMQCFYLISA 120
             GSA+ D            G PL  LYS IS++L+   LLDS+SRVPLTRMQCF LISA
Sbjct: 61  AFGSALEDLTHHPLFYILLLGLPLSFLYSRISSYLLHTQLLDSLSRVPLTRMQCFLLISA 120

Query: 121 GSFTHFFLDHLFEENGKTTTYTWILSTGWWQGRAPVNPDAVVVVGFLCVCLIGGFFYLNR 180
           GSFTHFFLDHLFEENGKTTTYTWILSTGWWQ RAPVNPDAVVVV FLC CLIGGFFYLNR
Sbjct: 121 GSFTHFFLDHLFEENGKTTTYTWILSTGWWQSRAPVNPDAVVVVVFLCACLIGGFFYLNR 180

Query: 181 ANSSNXXXXXXXXXXXXXXXXXXXYCLWCSIQIYWINPR 219
           AN+SN                   YC WC+IQIYWI+PR
Sbjct: 181 ANASNSIKKKSYQSMLLVMSIACLYCFWCAIQIYWISPR 219


>Glyma17g32440.1 
          Length = 74

 Score = 58.9 bits (141), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/33 (87%), Positives = 29/33 (87%)

Query: 144 ILSTGWWQGRAPVNPDAVVVVGFLCVCLIGGFF 176
           ILST WWQ RAPVNPDAVVVV FLC CLIGGFF
Sbjct: 1   ILSTSWWQSRAPVNPDAVVVVVFLCSCLIGGFF 33