Miyakogusa Predicted Gene

Lj4g3v1512520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1512520.1 tr|Q8LQ55|Q8LQ55_ORYSJ Integral membrane
protein-like OS=Oryza sativa subsp. japonica
GN=P0039G05.12,38.6,2e-19,seg,NULL; DUF588,Uncharacterised protein
family UPF0497, trans-membrane plant,CUFF.49327.1
         (185 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g02140.1                                                       203   1e-52
Glyma04g35320.1                                                       189   1e-48
Glyma06g19450.1                                                       183   1e-46
Glyma17g09780.1                                                       158   2e-39
Glyma16g08050.1                                                       121   4e-28
Glyma19g23460.1                                                        86   3e-17
Glyma18g44020.1                                                        69   2e-12
Glyma09g41680.1                                                        68   4e-12
Glyma01g31910.1                                                        65   5e-11
Glyma13g23770.1                                                        55   5e-08

>Glyma05g02140.1 
          Length = 232

 Score =  203 bits (516), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 101/156 (64%), Positives = 108/156 (69%), Gaps = 2/156 (1%)

Query: 29  SKREVMARKVALGFRLSEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNVIAFA 88
            KREVMA+KVA  FRLSEVVLCLISFSVMAADKT+GWSGDSFDRYKEYRYCLSVNVIAF 
Sbjct: 78  PKREVMAKKVAFCFRLSEVVLCLISFSVMAADKTRGWSGDSFDRYKEYRYCLSVNVIAFV 137

Query: 89  YAAFQACDLGYQLFAGRQLINXXXXXXXXXXMDQVLAYLLIXXXXXXXXRVDDWQSNWGK 148
           YAAFQA DL YQ+  GR++IN             VLAYLLI        RVDDWQSNWGK
Sbjct: 138 YAAFQAGDLAYQVVTGRRIINHHLRKSQRTRF--VLAYLLISAASSAATRVDDWQSNWGK 195

Query: 149 DEFTEMASXXXXXXXXXXXXXXXXXXISGYNLCTIY 184
           DEFTEMAS                   SGYNLCT++
Sbjct: 196 DEFTEMASASIALAFLAFVAFAISSLFSGYNLCTLF 231


>Glyma04g35320.1 
          Length = 268

 Score =  189 bits (480), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 94/150 (62%), Positives = 101/150 (67%)

Query: 32  EVMARKVALGFRLSEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNVIAFAYAA 91
           E    K ALGFRLSEVV+CLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNVI FAY+A
Sbjct: 114 EETVSKAALGFRLSEVVVCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNVIGFAYSA 173

Query: 92  FQACDLGYQLFAGRQLINXXXXXXXXXXMDQVLAYLLIXXXXXXXXRVDDWQSNWGKDEF 151
            QACDL  Q+  G++LI+          MDQVLAYLLI        RVDDW SNWGKDEF
Sbjct: 174 LQACDLTCQIATGKRLISHHLRNHFDFFMDQVLAYLLISASSSAATRVDDWISNWGKDEF 233

Query: 152 TEMASXXXXXXXXXXXXXXXXXXISGYNLC 181
           TEMA+                  ISGY LC
Sbjct: 234 TEMATASIGMAFLAFVAFAISSLISGYTLC 263


>Glyma06g19450.1 
          Length = 263

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 92/152 (60%), Positives = 101/152 (66%)

Query: 30  KREVMARKVALGFRLSEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNVIAFAY 89
           K +    K ALGFRLSEVV+CLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVN+I FAY
Sbjct: 107 KTDETVSKAALGFRLSEVVVCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNIIGFAY 166

Query: 90  AAFQACDLGYQLFAGRQLINXXXXXXXXXXMDQVLAYLLIXXXXXXXXRVDDWQSNWGKD 149
           +A QACDL  QL  G++LI+          MDQVLAYLLI        RV+DW  NWGKD
Sbjct: 167 SALQACDLTCQLATGKRLISHHLRNHFDFFMDQVLAYLLISSSSSAATRVEDWILNWGKD 226

Query: 150 EFTEMASXXXXXXXXXXXXXXXXXXISGYNLC 181
           EFTEMA+                  ISGY LC
Sbjct: 227 EFTEMATASIGMAFLAFVAFAISSLISGYTLC 258


>Glyma17g09780.1 
          Length = 235

 Score =  158 bits (400), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 85/156 (54%), Positives = 94/156 (60%), Gaps = 27/156 (17%)

Query: 29  SKREVMARKVALGFRLSEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNVIAFA 88
            KRE+MA+KVALGFRLSEVVLCLISFSVMAADKT+GWSGDSFDRYKEYRYCLSVNVIAF 
Sbjct: 106 PKREMMAKKVALGFRLSEVVLCLISFSVMAADKTRGWSGDSFDRYKEYRYCLSVNVIAFV 165

Query: 89  YAAFQACDLGYQLFAGRQLINXXXXXXXXXXMDQVLAYLLIXXXXXXXXRVDDWQSNWGK 148
           YAAFQACDL YQ+  GR++IN          MDQ                          
Sbjct: 166 YAAFQACDLAYQVVTGRRIINHHLRYHFDFFMDQA------------------------- 200

Query: 149 DEFTEMASXXXXXXXXXXXXXXXXXXISGYNLCTIY 184
            +F  MAS                  ISGYNLCT++
Sbjct: 201 -KFI-MASASIALTFLAFVAFAISSLISGYNLCTLF 234


>Glyma16g08050.1 
          Length = 317

 Score =  121 bits (303), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 59/128 (46%), Positives = 76/128 (59%)

Query: 29  SKREVMARKVALGFRLSEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNVIAFA 88
           SK+     K+ LG R++  V CL SFSV+A DK QGW+ DSF  YKE+RY LSVNVI F 
Sbjct: 162 SKKIATWSKLLLGLRVTAFVFCLASFSVLATDKKQGWAIDSFYLYKEFRYSLSVNVIGFV 221

Query: 89  YAAFQACDLGYQLFAGRQLINXXXXXXXXXXMDQVLAYLLIXXXXXXXXRVDDWQSNWGK 148
           ++A Q CDLG     G+ L+           +DQ+L YLL+        R  DW SNWG+
Sbjct: 222 HSALQICDLGRYFATGKHLVEHQLRGYFTFALDQILTYLLMSASSSAATRAYDWVSNWGE 281

Query: 149 DEFTEMAS 156
           D+F  MA+
Sbjct: 282 DKFPYMAN 289


>Glyma19g23460.1 
          Length = 96

 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/54 (74%), Positives = 44/54 (81%)

Query: 30 KREVMARKVALGFRLSEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVN 83
          KREVMA+KVA GF  SEVV CLI F V+AADKT GWSGDSFDRYKEYR+ +  N
Sbjct: 4  KREVMAKKVAFGFLFSEVVPCLILFLVIAADKTHGWSGDSFDRYKEYRFKVESN 57


>Glyma18g44020.1 
          Length = 197

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 5/154 (3%)

Query: 30  KREVMARKVALGFRLSEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNVIAFAY 89
           KRE + ++ +LG R   ++ CLISF +MA++K   W    FD+Y+EYRY L++ +++  Y
Sbjct: 44  KREDLIKRGSLGLRGIALLFCLISFIIMASNKHGDWR--EFDKYEEYRYLLAIAILSSLY 101

Query: 90  AAFQACDLGYQLFAGRQLINXXXXXXXXXXMDQVLAYLLIXXXXXXXXRVDDWQSNWGKD 149
              QA     +L   +QL+            DQ++AYLLI          +  +   G D
Sbjct: 102 TGAQAFRQIQELSTAKQLLQPRMAAMIDFFGDQIIAYLLISSASSAIPMTNRMRE--GAD 159

Query: 150 E-FTEMASXXXXXXXXXXXXXXXXXXISGYNLCT 182
             FT+ ++                  ISGY L T
Sbjct: 160 NIFTDSSAAAISMSIFAFLCLAVSALISGYKLST 193


>Glyma09g41680.1 
          Length = 197

 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 3/153 (1%)

Query: 30  KREVMARKVALGFRLSEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNVIAFAY 89
           KRE + ++ +LG R   ++  LISF +MA++K   W    FD+Y+EYRY L++ +++  Y
Sbjct: 44  KREDLIKRGSLGLRGVALLFSLISFFIMASNKHGDWR--EFDKYEEYRYLLAIAILSSLY 101

Query: 90  AAFQACDLGYQLFAGRQLINXXXXXXXXXXMDQVLAYLLIXXXXXXXXRVDDWQSNWGKD 149
              QA  L  +L   +QL+            DQ++AYLLI         + +       +
Sbjct: 102 TGAQAFRLLQELSTAKQLLQPRMAAMIDFFGDQIIAYLLISSASSAIP-ITNRMREGADN 160

Query: 150 EFTEMASXXXXXXXXXXXXXXXXXXISGYNLCT 182
            FT+ ++                  ISGY L T
Sbjct: 161 IFTDSSAAAISMSIFAFLCLAVSALISGYKLST 193


>Glyma01g31910.1 
          Length = 205

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 3/153 (1%)

Query: 30  KREVMARKVALGFRLSEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNVIAFAY 89
           KR+ M R+ +LG R   + + LIS  + A++K   W  ++FD+++EYRY L+V  ++  Y
Sbjct: 45  KRKEMLRRGSLGLRGIALFMSLISLILTASNKHGYW--NNFDKFEEYRYMLAVAALSSLY 102

Query: 90  AAFQACDLGYQLFAGRQLINXXXXXXXXXXMDQVLAYLLIXXXXXXXXRVDDWQSNWGKD 149
              Q     ++LF G+ L+            DQV+AYLLI          D+ +     +
Sbjct: 103 TVVQVFRQVHELFTGKSLMRPKTEGLIDFVGDQVVAYLLISSTSSAIPATDEMR-EVTTN 161

Query: 150 EFTEMASXXXXXXXXXXXXXXXXXXISGYNLCT 182
            FT+ A+                  ISGY L T
Sbjct: 162 IFTDSAAAGIAFSFFAFCCLALSAVISGYKLST 194


>Glyma13g23770.1 
          Length = 298

 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 66/169 (39%), Gaps = 23/169 (13%)

Query: 38  VALGFRLSEVVLCLISFSVMAADKTQ----GWSGDSFDR------------------YKE 75
           V L  R++  VLC I+FSV+A D+ +    G S ++                     Y+ 
Sbjct: 129 VLLALRIAAFVLCQIAFSVLAGDRRKKLRRGSSTNNLYLSYYDSSSSSEYSQTHWYDYEA 188

Query: 76  YRYCLSVNVIAFAYAAFQACDLGYQLFAGRQLINXXXXXXXXXXMDQVLAYLLIXXXXXX 135
           ++Y LSVN+I F Y+  Q  D+   +   R  ++          MDQ LAYLL+      
Sbjct: 189 FKYFLSVNIIGFVYSGLQIYDIVKYMITKRHTMDPKLRGYFDFAMDQALAYLLMSASSSA 248

Query: 136 XXRVDDW-QSNWGKDEFTEMASXXXXXXXXXXXXXXXXXXISGYNLCTI 183
              V  W  S    D+  +MA+                  +S +  C +
Sbjct: 249 ATIVCSWTNSVLAADKHVQMANACVALSFVAFVAFASSSVVSAFIFCRV 297