Miyakogusa Predicted Gene

Lj4g3v1479290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1479290.1 Non Chatacterized Hit- tr|C5WRZ3|C5WRZ3_SORBI
Putative uncharacterized protein Sb01g000700
OS=Sorghu,29.95,3e-19,PARP_CATALYTIC,Poly(ADP-ribose) polymerase,
catalytic domain; ADP-ribosylation,NULL; RST,RST domain ,CUFF.49311.1
         (185 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g09720.1                                                       149   1e-36
Glyma05g02210.1                                                       131   5e-31
Glyma04g35560.1                                                       121   5e-28
Glyma01g01900.4                                                       108   3e-24
Glyma01g01900.3                                                       108   3e-24
Glyma01g01900.2                                                       108   3e-24
Glyma01g01900.1                                                       108   3e-24
Glyma09g34000.3                                                       106   1e-23
Glyma09g34000.1                                                       105   2e-23
Glyma09g34000.2                                                        87   1e-17
Glyma01g01900.6                                                        86   3e-17
Glyma01g01900.5                                                        86   3e-17
Glyma08g12960.1                                                        81   6e-16

>Glyma17g09720.1 
          Length = 322

 Score =  149 bits (377), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/163 (52%), Positives = 102/163 (62%), Gaps = 35/163 (21%)

Query: 4   LYSVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIR 63
           L SV+ SV DKDGLRHL+LCRVILG+ E+V   S+QCRS S+E+DSGVDD+S+PKEY I 
Sbjct: 140 LESVKSSVVDKDGLRHLLLCRVILGKTELVPRDSNQCRSSSEEFDSGVDDLSNPKEYVIW 199

Query: 64  SNRMNTHVLPEYVLSFRIPPTGLFGWVCSLCWSSYCFIICASVVKILIIFSIFVGRAVNV 123
            N++NTHVLPEYVLSFR  P+ L G V                          +G     
Sbjct: 200 CNQINTHVLPEYVLSFRF-PSPLKGHVK-------------------------IG----- 228

Query: 124 AAAREPSRPKSPWVPFPALISALSKILPQHDMAIVLKLQKDYR 166
               EP RP SPW+ FPALIS LSKILP  D+A + K  KDYR
Sbjct: 229 ----EPLRPSSPWMAFPALISVLSKILPPPDIAYIAKFHKDYR 267


>Glyma05g02210.1 
          Length = 328

 Score =  131 bits (329), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 77/148 (52%), Positives = 91/148 (61%), Gaps = 35/148 (23%)

Query: 19  HLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVLPEYVLS 78
           HL+LCRVILG+ EVV  GS QCRS S E+DSGVDD+S+PKEY I  N++NTHVLPEYVLS
Sbjct: 147 HLLLCRVILGKTEVVPRGSYQCRSSSQEFDSGVDDLSNPKEYVIWCNQINTHVLPEYVLS 206

Query: 79  FRIPPTGLFGWVCSLCWSSYCFIICASVVKILIIFSIFVGRAVNVAAAREPSRPKSPWVP 138
           FR+ P+ L G                 +VKI                  EP RP SPW+ 
Sbjct: 207 FRL-PSPLKG-----------------IVKI-----------------GEPLRPSSPWMA 231

Query: 139 FPALISALSKILPQHDMAIVLKLQKDYR 166
           FPALIS LSKILP  ++A + K  KDYR
Sbjct: 232 FPALISMLSKILPPSEVASIAKFHKDYR 259


>Glyma04g35560.1 
          Length = 330

 Score =  121 bits (303), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 85/158 (53%), Gaps = 35/158 (22%)

Query: 4   LYSVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIR 63
           L S R     KDG+RH +LCRVILGR E+V   ++ C    +EYDSGVD  S P +Y I 
Sbjct: 151 LQSARGCGVGKDGVRHALLCRVILGRSEIVRDNTEHCYPSCEEYDSGVDSFSGPTKYIIW 210

Query: 64  SNRMNTHVLPEYVLSFRIPPTGLFGWVCSLCWSSYCFIICASVVKILIIFSIFVGRAVNV 123
           SNRMNTHVLP YV+SFR+                                S F G     
Sbjct: 211 SNRMNTHVLPAYVVSFRV--------------------------------SSFKGME--- 235

Query: 124 AAAREPSRPKSPWVPFPALISALSKILPQHDMAIVLKL 161
            +  EP RP SPW+PFP LISALSK+LP  D+A++ K 
Sbjct: 236 KSEEEPLRPTSPWMPFPTLISALSKVLPPCDIALISKF 273


>Glyma01g01900.4 
          Length = 583

 Score =  108 bits (270), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 18/171 (10%)

Query: 6   SVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSN 65
           SVR    D++G+RHL LCRVI+G ME++ PG+ Q    S EYD+GVD +  P+ Y + + 
Sbjct: 374 SVRYCDVDENGVRHLALCRVIMGNMEILQPGTGQFHPSSCEYDNGVDSIECPRYYVVWNM 433

Query: 66  RMNTHVLPEYVLSFRIP--PTGLF--------GWVCSLCWSSYCFIICASVVKILIIFSI 115
            MNTH+ PE+V+SF++     G F          V S C   +  +   S        ++
Sbjct: 434 NMNTHIYPEFVVSFKVSSDAEGHFCGSEGKNVSGVNSACQGPHGLLHSESS-------TV 486

Query: 116 FVGRAVNVAAAREPSRPKSPWVPFPALISALSKILPQHDMAIVLKLQKDYR 166
             G+A ++ A+  P  PKSPW+PFP L+ A+   +P   M ++    + +R
Sbjct: 487 DNGKAPSMVAS-TPKVPKSPWMPFPLLLDAIRNQVPPKGMDVIKIYYEQFR 536


>Glyma01g01900.3 
          Length = 583

 Score =  108 bits (270), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 18/171 (10%)

Query: 6   SVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSN 65
           SVR    D++G+RHL LCRVI+G ME++ PG+ Q    S EYD+GVD +  P+ Y + + 
Sbjct: 374 SVRYCDVDENGVRHLALCRVIMGNMEILQPGTGQFHPSSCEYDNGVDSIECPRYYVVWNM 433

Query: 66  RMNTHVLPEYVLSFRIP--PTGLF--------GWVCSLCWSSYCFIICASVVKILIIFSI 115
            MNTH+ PE+V+SF++     G F          V S C   +  +   S        ++
Sbjct: 434 NMNTHIYPEFVVSFKVSSDAEGHFCGSEGKNVSGVNSACQGPHGLLHSESS-------TV 486

Query: 116 FVGRAVNVAAAREPSRPKSPWVPFPALISALSKILPQHDMAIVLKLQKDYR 166
             G+A ++ A+  P  PKSPW+PFP L+ A+   +P   M ++    + +R
Sbjct: 487 DNGKAPSMVAS-TPKVPKSPWMPFPLLLDAIRNQVPPKGMDVIKIYYEQFR 536


>Glyma01g01900.2 
          Length = 583

 Score =  108 bits (270), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 18/171 (10%)

Query: 6   SVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSN 65
           SVR    D++G+RHL LCRVI+G ME++ PG+ Q    S EYD+GVD +  P+ Y + + 
Sbjct: 374 SVRYCDVDENGVRHLALCRVIMGNMEILQPGTGQFHPSSCEYDNGVDSIECPRYYVVWNM 433

Query: 66  RMNTHVLPEYVLSFRIP--PTGLF--------GWVCSLCWSSYCFIICASVVKILIIFSI 115
            MNTH+ PE+V+SF++     G F          V S C   +  +   S        ++
Sbjct: 434 NMNTHIYPEFVVSFKVSSDAEGHFCGSEGKNVSGVNSACQGPHGLLHSESS-------TV 486

Query: 116 FVGRAVNVAAAREPSRPKSPWVPFPALISALSKILPQHDMAIVLKLQKDYR 166
             G+A ++ A+  P  PKSPW+PFP L+ A+   +P   M ++    + +R
Sbjct: 487 DNGKAPSMVAS-TPKVPKSPWMPFPLLLDAIRNQVPPKGMDVIKIYYEQFR 536


>Glyma01g01900.1 
          Length = 583

 Score =  108 bits (270), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 18/171 (10%)

Query: 6   SVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSN 65
           SVR    D++G+RHL LCRVI+G ME++ PG+ Q    S EYD+GVD +  P+ Y + + 
Sbjct: 374 SVRYCDVDENGVRHLALCRVIMGNMEILQPGTGQFHPSSCEYDNGVDSIECPRYYVVWNM 433

Query: 66  RMNTHVLPEYVLSFRIP--PTGLF--------GWVCSLCWSSYCFIICASVVKILIIFSI 115
            MNTH+ PE+V+SF++     G F          V S C   +  +   S        ++
Sbjct: 434 NMNTHIYPEFVVSFKVSSDAEGHFCGSEGKNVSGVNSACQGPHGLLHSESS-------TV 486

Query: 116 FVGRAVNVAAAREPSRPKSPWVPFPALISALSKILPQHDMAIVLKLQKDYR 166
             G+A ++ A+  P  PKSPW+PFP L+ A+   +P   M ++    + +R
Sbjct: 487 DNGKAPSMVAS-TPKVPKSPWMPFPLLLDAIRNQVPPKGMDVIKIYYEQFR 536


>Glyma09g34000.3 
          Length = 280

 Score =  106 bits (264), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 6/165 (3%)

Query: 6   SVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSN 65
           SVR    D++G+RHL LCRVI+G ME++ PG+DQ    S EYD+GVD +  P+ Y + + 
Sbjct: 71  SVRYCDVDENGVRHLALCRVIMGNMEILRPGTDQFHPSSCEYDNGVDAIECPQYYVVWNM 130

Query: 66  RMNTHVLPEYVLSFRIPPTGLFGWVCSLCWSSYCFI--ICASVVKILIIFSIFV--GRAV 121
            MNTH+ PE+V+SF++  +   G  C     +   +   C     +L   S  V  G+A 
Sbjct: 131 NMNTHIYPEFVVSFKV-SSDAEGHFCGSEGKNVSGVNTACDGPHGLLNSESSTVDNGKAP 189

Query: 122 NVAAAREPSRPKSPWVPFPALISALSKILPQHDMAIVLKLQKDYR 166
           ++ ++  P  PKSPW+PFP L+ A+   +P   M ++    + +R
Sbjct: 190 SMVSST-PKVPKSPWMPFPVLLDAIRDQVPPTGMDVIKTYYEQFR 233


>Glyma09g34000.1 
          Length = 446

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 6/165 (3%)

Query: 6   SVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSN 65
           SVR    D++G+RHL LCRVI+G ME++ PG+DQ    S EYD+GVD +  P+ Y + + 
Sbjct: 237 SVRYCDVDENGVRHLALCRVIMGNMEILRPGTDQFHPSSCEYDNGVDAIECPQYYVVWNM 296

Query: 66  RMNTHVLPEYVLSFRIPPTGLFGWVCSLCWSSYCFI--ICASVVKILIIFSIFV--GRAV 121
            MNTH+ PE+V+SF++  +   G  C     +   +   C     +L   S  V  G+A 
Sbjct: 297 NMNTHIYPEFVVSFKV-SSDAEGHFCGSEGKNVSGVNTACDGPHGLLNSESSTVDNGKAP 355

Query: 122 NVAAAREPSRPKSPWVPFPALISALSKILPQHDMAIVLKLQKDYR 166
           ++ ++  P  PKSPW+PFP L+ A+   +P   M ++    + +R
Sbjct: 356 SMVSST-PKVPKSPWMPFPVLLDAIRDQVPPTGMDVIKTYYEQFR 399


>Glyma09g34000.2 
          Length = 371

 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 55/76 (72%)

Query: 6   SVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSN 65
           SVR    D++G+RHL LCRVI+G ME++ PG+DQ    S EYD+GVD +  P+ Y + + 
Sbjct: 237 SVRYCDVDENGVRHLALCRVIMGNMEILRPGTDQFHPSSCEYDNGVDAIECPQYYVVWNM 296

Query: 66  RMNTHVLPEYVLSFRI 81
            MNTH+ PE+V+SF++
Sbjct: 297 NMNTHIYPEFVVSFKV 312


>Glyma01g01900.6 
          Length = 511

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 54/76 (71%)

Query: 6   SVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSN 65
           SVR    D++G+RHL LCRVI+G ME++ PG+ Q    S EYD+GVD +  P+ Y + + 
Sbjct: 374 SVRYCDVDENGVRHLALCRVIMGNMEILQPGTGQFHPSSCEYDNGVDSIECPRYYVVWNM 433

Query: 66  RMNTHVLPEYVLSFRI 81
            MNTH+ PE+V+SF++
Sbjct: 434 NMNTHIYPEFVVSFKV 449


>Glyma01g01900.5 
          Length = 511

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 54/76 (71%)

Query: 6   SVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSN 65
           SVR    D++G+RHL LCRVI+G ME++ PG+ Q    S EYD+GVD +  P+ Y + + 
Sbjct: 374 SVRYCDVDENGVRHLALCRVIMGNMEILQPGTGQFHPSSCEYDNGVDSIECPRYYVVWNM 433

Query: 66  RMNTHVLPEYVLSFRI 81
            MNTH+ PE+V+SF++
Sbjct: 434 NMNTHIYPEFVVSFKV 449


>Glyma08g12960.1 
          Length = 199

 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 56/78 (71%)

Query: 2   WALYSVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYF 61
           ++L S   +VAD+ G RH++LC+VILG++E V  GS Q +  S +YD+GVDD+S+P+ + 
Sbjct: 121 FSLDSAMCTVADEHGFRHVLLCKVILGKVEAVHAGSKQSQPSSKQYDTGVDDISAPRRHT 180

Query: 62  IRSNRMNTHVLPEYVLSF 79
           I +  +NTH+ P Y++ F
Sbjct: 181 IWTAYLNTHIHPNYIICF 198