Miyakogusa Predicted Gene

Lj4g3v1478260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1478260.1 Non Chatacterized Hit- tr|K4B7V5|K4B7V5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,52.63,0.000000000000005,A_tha_TIGR01569: plant integral
membrane protein T,Uncharacterised protein family UPF0497,
trans-mem,CUFF.49301.1
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g22100.1                                                       102   1e-22
Glyma08g13620.1                                                        96   1e-20
Glyma05g30480.1                                                        95   2e-20
Glyma09g09990.1                                                        89   8e-19

>Glyma15g22100.1 
          Length = 165

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/76 (63%), Positives = 54/76 (71%)

Query: 1   MVVIALDVLGPRSDNQGLYLTLIAIFDMMIMXXXXXXXXXXXFMSELGRNGNSHARWAKI 60
           +V+I ++VLGPR D +GL L LIAI DMM M           FMSELG+NGNSHARW KI
Sbjct: 68  LVMIVMEVLGPRYDYKGLRLALIAILDMMTMALASAGDGAATFMSELGKNGNSHARWDKI 127

Query: 61  CHKFGTYCNRGGGALI 76
           C KF TYCNRGG ALI
Sbjct: 128 CDKFETYCNRGGAALI 143


>Glyma08g13620.1 
          Length = 194

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 53/77 (68%)

Query: 1   MVVIALDVLGPRSDNQGLYLTLIAIFDMMIMXXXXXXXXXXXFMSELGRNGNSHARWAKI 60
           MVVI +++LGP+ D + L L LIAI D+M M           FM+ELGRNGNSHARW KI
Sbjct: 93  MVVIGVEILGPQYDYKELRLGLIAILDVMTMALAATGDGAATFMAELGRNGNSHARWDKI 152

Query: 61  CHKFGTYCNRGGGALIA 77
           C KF  YCNRGG ALIA
Sbjct: 153 CDKFEAYCNRGGVALIA 169


>Glyma05g30480.1 
          Length = 194

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 54/77 (70%)

Query: 1   MVVIALDVLGPRSDNQGLYLTLIAIFDMMIMXXXXXXXXXXXFMSELGRNGNSHARWAKI 60
           ++VI +++LGP+ D +GL L LIAI D+M M           FM+ELGRNGNSHARW KI
Sbjct: 93  LLVIGVEILGPQYDYKGLRLGLIAILDVMTMALAATGDGAATFMAELGRNGNSHARWDKI 152

Query: 61  CHKFGTYCNRGGGALIA 77
           C KF  YCNRGG AL+A
Sbjct: 153 CDKFEAYCNRGGVALVA 169


>Glyma09g09990.1 
          Length = 169

 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 52/76 (68%)

Query: 1   MVVIALDVLGPRSDNQGLYLTLIAIFDMMIMXXXXXXXXXXXFMSELGRNGNSHARWAKI 60
           +V+IA+++LG R D +G  L LIAI DMM M           FMSELG+NGNSHA+W KI
Sbjct: 69  LVMIAMEILGTRYDYKGPRLALIAILDMMTMALASDGDGAATFMSELGKNGNSHAKWDKI 128

Query: 61  CHKFGTYCNRGGGALI 76
           C KF TYC+RG  ALI
Sbjct: 129 CDKFETYCDRGVVALI 144