Miyakogusa Predicted Gene
- Lj4g3v1474120.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1474120.2 Non Chatacterized Hit- tr|I1JX93|I1JX93_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38894
PE,58.41,0,seg,NULL; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; ZINC
FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN,CUFF.49286.2
(438 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g35870.1 479 e-135
Glyma17g09550.1 428 e-120
Glyma02g05800.1 261 1e-69
Glyma08g01340.1 255 7e-68
Glyma05g38310.1 250 2e-66
Glyma16g24490.1 137 3e-32
Glyma16g24450.1 105 9e-23
Glyma11g18800.1 57 4e-08
>Glyma04g35870.1
Length = 688
Score = 479 bits (1234), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/457 (55%), Positives = 311/457 (68%), Gaps = 35/457 (7%)
Query: 1 MRLGADVIVFSCHLNDMGWTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVING 60
MRLGADVIVFSCHLN+ TQS+GLLSYT L+++++DRIVVPMVNY+++ S G ++++NG
Sbjct: 226 MRLGADVIVFSCHLNNRILTQSIGLLSYTYLIKTQLDRIVVPMVNYEFDTSTGSLKILNG 285
Query: 61 LEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLELDFDTDPED 120
EH +N+SLLL+WSPYSSEA+LLKQF +IG HGTK+II+NLWCN D +LELDFDTDP D
Sbjct: 286 NEHFVSNLSLLLRWSPYSSEADLLKQFDDIGSHGTKVIIYNLWCNDDANLELDFDTDPTD 345
Query: 121 IHIAGHFKKTDTTSARKKI--------------VYLSILYLRIPEHFRIILRGQVVKLHN 166
I IAG K+ DT A K + VY+SILYL+IPE F++ILRGQVVK HN
Sbjct: 346 IRIAGDVKQIDTLKAWKSVNEEHIANRLRYSLHVYMSILYLKIPESFQMILRGQVVKPHN 405
Query: 167 IADDLKHIQYILYTPQSGGSKKAT--FVTTIGFLKEAPEVNIHGFNIYHKNRLILPFWPA 224
IADDLK Q++ Y P GGS K T VTTIGFLKEAP+VNIHGFN+YHKNRLILPFW
Sbjct: 406 IADDLKFPQFVKYAPVIGGSVKGTALTVTTIGFLKEAPQVNIHGFNVYHKNRLILPFWQV 465
Query: 225 VSYGKNRGRGVVGVLQADYIEPTHNKQDFERSSLSQKLEIRLKEMALEYWDYHCHLIGYP 284
VSY +RGRGVVG+LQAD+IEPTHNKQDFER+SL QKLE RLKEM EYWD HC L GY
Sbjct: 466 VSYLDSRGRGVVGILQADFIEPTHNKQDFERTSLFQKLEGRLKEMTWEYWDTHCTLFGY- 524
Query: 285 EVKHKAPVSQCFSSMQEPLAI------------VIXX------XXXXXXXXXXRYEQAPL 326
+ K K + +SMQ+PLAI V+ R EQ
Sbjct: 525 KDKDKKKLPPRVTSMQKPLAIEKPVMLNRSCSPVVNTKIEYGNSEQCSTKLQIRSEQGSH 584
Query: 327 AKRKTRGFIDPHKAKRQSAELNVIGVSCSQNVQTMASPADQVVDQEAINIIEANKNLIAX 386
KRKT +D ++ + NV V SQN Q +A+PADQV D++ +++++ NK L A
Sbjct: 585 NKRKTHELVDLQNTEKHARTENVTCVGFSQNKQIIATPADQVFDRKTMHLVQQNKKLHAK 644
Query: 387 XXXXXXXXXXXXXKVAQLRSKVEEAQHEYNRLLAEAQ 423
KV L+S+++EAQ EY RLLAE +
Sbjct: 645 CLEFEKTGEELNLKVTMLKSEIQEAQDEYKRLLAEVK 681
>Glyma17g09550.1
Length = 466
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/311 (66%), Positives = 243/311 (78%), Gaps = 14/311 (4%)
Query: 1 MRLGADVIVFSCHLNDMGWTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVING 60
MRLGADVIVFS H N+M TQS+GLLSYT LMQ++ DR+VVPMVNYK++ S G++E +N
Sbjct: 123 MRLGADVIVFSRHQNNMKLTQSIGLLSYTYLMQTQQDRVVVPMVNYKFDTSTGYLERLND 182
Query: 61 LEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLELDFDTDPED 120
EH +N+S+LL WSPY SE ELLK F +IG+HGTKIIIFNLW N DG+LELDF++DPED
Sbjct: 183 GEHFRSNLSILLHWSPYLSEEELLKLFDDIGNHGTKIIIFNLWFNDDGNLELDFNSDPED 242
Query: 121 IHIAGHFKKTDTTSARKKI--------------VYLSILYLRIPEHFRIILRGQVVKLHN 166
IHI G KK DT SA K + YLSILYLRIPE FR+ILRGQVVKLHN
Sbjct: 243 IHIVGDIKKIDTHSASKIVNEGHIANRFHYSLHAYLSILYLRIPESFRMILRGQVVKLHN 302
Query: 167 IADDLKHIQYILYTPQSGGSKKATFVTTIGFLKEAPEVNIHGFNIYHKNRLILPFWPAVS 226
IADDLK+ +++LY PQ G SK+ VTTIGF+KEAP+ NIHGFN+YHKNRLILPFW V+
Sbjct: 303 IADDLKYTEFVLYRPQCGSSKEGVSVTTIGFVKEAPKGNIHGFNVYHKNRLILPFWKVVN 362
Query: 227 YGKNRGRGVVGVLQADYIEPTHNKQDFERSSLSQKLEIRLKEMALEYWDYHCHLIGYPEV 286
Y RGRGVVG+LQADY+EPTHNKQDFER+SL QKLE+RLK+M EYWDYHCHLIG +
Sbjct: 363 YTNTRGRGVVGILQADYLEPTHNKQDFERTSLFQKLELRLKQMTWEYWDYHCHLIGNHII 422
Query: 287 KHKAPVSQCFS 297
K + CFS
Sbjct: 423 KKPVALLDCFS 433
>Glyma02g05800.1
Length = 594
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 200/343 (58%), Gaps = 51/343 (14%)
Query: 1 MRLGADVIVFSCHLNDMGWTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVING 60
MRLGADVIVFS ++ TQSVGLLSYT L ++ D +VVPM+++ + + +
Sbjct: 195 MRLGADVIVFSRAMHSGRATQSVGLLSYTFLRRTGQDDVVVPMIDFDISGHWAEPIIYSS 254
Query: 61 LEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLELDFDTDPED 120
+ N+ +L WSP++S+ EL+ QF +IG HGTK++I+NLW N +G EL FD D ED
Sbjct: 255 QHEWSANLKTILDWSPFTSKEELMLQFDDIGSHGTKVVIYNLWLNDEGIYELSFDDDAED 314
Query: 121 IH-------------------------IAGHF-KKTDTTSARKKI--------------- 139
+ I G++ ++ T A K +
Sbjct: 315 LSNSWYPSRNRDRVSREKDLKKGFLKLINGYYAERWATHGAEKNLCKKTVQLQSHISYRL 374
Query: 140 -----VYLSILYLRIPEHFRIILRGQVVKLHNIADDLKHIQYILYTPQSGGSKKATFV-- 192
Y+S+LYLR +F IILRG++V NI DDL + + I Y PQ + V
Sbjct: 375 RFSLRAYVSMLYLRKFSNFSIILRGKLVDQFNIVDDLIYSKVIPYKPQLAMASNEAIVET 434
Query: 193 -TTIGFLKEAPEVNIHGFNIYHKNRLILPFWPAVSYGKNRGRGVVGVLQADYIEPTHNKQ 251
TTIGF+KEA E+ + GFN+YHKNRLI PFW V+ G ++GR VVGVL+A++IEP H+KQ
Sbjct: 435 KTTIGFIKEAAEIKVTGFNVYHKNRLIKPFWKVVADGSSKGRCVVGVLEANFIEPAHDKQ 494
Query: 252 DFERSSLSQKLEIRLKEMALEYWDYHCHLIGY--PEVKHKAPV 292
DFERS L +LE +LK+M ++YW HCHL+GY P +K + V
Sbjct: 495 DFERSVLFIRLENKLKQMTMDYWREHCHLVGYQPPNLKSQKNV 537
>Glyma08g01340.1
Length = 820
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 187/312 (59%), Gaps = 23/312 (7%)
Query: 1 MRLGADVIVFSCHLNDMG--WTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVI 58
MRLGADVIVFS + G TQS+GLLSYT L + + IVVPM++Y+ + +
Sbjct: 249 MRLGADVIVFSRYPGKDGKSSTQSIGLLSYTFLRSTGKEDIVVPMLDYERRGQEWNKIIR 308
Query: 59 NGLEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLELDFDTDP 118
L+ N+ ++QWSP+S+EA+LL QF + HGT++II+NLW + G LELDFD DP
Sbjct: 309 TSLDDWNKNVETIVQWSPFSNEADLLLQFNLVKDHGTRVIIYNLWEDDQGQLELDFDEDP 368
Query: 119 EDIHIAGHFKKTDTTSARKKI--------------VYLSILYLRIPEHFRIILRGQVVKL 164
DI I G + K+ Y SILYLR+P FRIILRG+ +
Sbjct: 369 HDIQIRGVNRDEKNIQMSKEFPNSRHFLTYRHSLRSYTSILYLRLPSGFRIILRGKDILH 428
Query: 165 HNIADDLKHIQYILYTPQSG------GSKKATFVTTIGFLKEAP-EVNIHGFNIYHKNRL 217
HNI +D+ Q + Y PQ+G V TIGF+K+A V++ GFN+YHKNRL
Sbjct: 429 HNIVNDMMMSQEVTYRPQAGVDGLLPKDSNMVAVVTIGFVKDAVHHVDVSGFNVYHKNRL 488
Query: 218 ILPFWPAVSYGKNRGRGVVGVLQADYIEPTHNKQDFERSSLSQKLEIRLKEMALEYWDYH 277
I PFW + + GRGV+GVL+A+++EP H+KQ FER+ + +LE +L +M +YW +
Sbjct: 489 IKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLESKLIQMQKKYWSTN 548
Query: 278 CHLIGYPEVKHK 289
CH IGY + K
Sbjct: 549 CHKIGYASNRSK 560
>Glyma05g38310.1
Length = 780
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 189/312 (60%), Gaps = 23/312 (7%)
Query: 1 MRLGADVIVFSCHLN-DM-GWTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVI 58
MRLGADVIVFS + DM +QS+GLLSYT L + + IVVPM++Y+ + +
Sbjct: 255 MRLGADVIVFSRYPGKDMKSSSQSIGLLSYTFLRSTGKEDIVVPMLDYERRGQEWNKIIR 314
Query: 59 NGLEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLELDFDTDP 118
L+ N+ ++QWSP+S+EA+LL+QF + HGT++II+NLW + G LELDFD DP
Sbjct: 315 TSLDDWDKNVETIVQWSPFSNEADLLRQFNLVKDHGTRVIIYNLWEDDQGQLELDFDEDP 374
Query: 119 EDIHIAGHFKKTDTTSARKKI--------------VYLSILYLRIPEHFRIILRGQVVKL 164
DI I G + K+ Y SILYLR+P FRIILRG+ +
Sbjct: 375 HDIQIRGVNRDEKNIQMAKEFPNSRHFLTYRHSLRSYASILYLRLPPGFRIILRGKDILH 434
Query: 165 HNIADDLKHIQYILYTPQSG------GSKKATFVTTIGFLKEAP-EVNIHGFNIYHKNRL 217
HNI +D+ Q + Y PQ+G V TIGF+K+A +++ GFN+YHKNRL
Sbjct: 435 HNIVNDMMMSQEVTYRPQAGVDGLLPKDSNMVAVVTIGFVKDAVHHIDVSGFNVYHKNRL 494
Query: 218 ILPFWPAVSYGKNRGRGVVGVLQADYIEPTHNKQDFERSSLSQKLEIRLKEMALEYWDYH 277
I PFW + + GRGV+GVL+A+++EP H+KQ FER+ + +LE +L +M +YW +
Sbjct: 495 IKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLESKLIQMQKKYWSTN 554
Query: 278 CHLIGYPEVKHK 289
C+ IGY + K
Sbjct: 555 CYKIGYASNRSK 566
>Glyma16g24490.1
Length = 283
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 87/126 (69%), Gaps = 3/126 (2%)
Query: 141 YLSILYLRIPEHFRIILRGQVVKLHNIADDLKHIQYILYTPQSGGSKKATFV---TTIGF 197
Y+S+LYLR +F IILRG++V NIADDL + + I Y PQ + TTIGF
Sbjct: 111 YVSMLYLRKFSNFSIILRGKLVDQFNIADDLIYSKVIPYKPQLAMATNEAIAETKTTIGF 170
Query: 198 LKEAPEVNIHGFNIYHKNRLILPFWPAVSYGKNRGRGVVGVLQADYIEPTHNKQDFERSS 257
+KEA E+ + GFN+YHKNRLI PFW V+ G ++GR VVGVL+A++IEP H+KQDFERS
Sbjct: 171 IKEAAEIKVTGFNVYHKNRLIKPFWKVVADGSSKGRCVVGVLEANFIEPAHDKQDFERSF 230
Query: 258 LSQKLE 263
+ K
Sbjct: 231 VLNKFR 236
>Glyma16g24450.1
Length = 235
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 75/112 (66%)
Query: 1 MRLGADVIVFSCHLNDMGWTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVING 60
MRLGADVIVFS ++ TQSVGLLSYT L ++ D +VVPM+++ + + +
Sbjct: 123 MRLGADVIVFSRAMHSGRATQSVGLLSYTFLRRTGQDDVVVPMIDFDISGHWAEPIIYSS 182
Query: 61 LEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLEL 112
+ + N+ +L WSP++S+ EL+ QF +IG HGTK++I+NLW N +G EL
Sbjct: 183 QDEWSANLKTILDWSPFTSKEELMLQFDDIGSHGTKVVIYNLWLNDEGIYEL 234
>Glyma11g18800.1
Length = 152
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 74 WSPYSSEAELLKQFVNI----GHHGTKIIIFNLWCNHDGDLELDFDTDPEDIHIAGHFKK 129
WSP+S+E +LL+QF + G TK+ W + + D ++IH+A F
Sbjct: 1 WSPFSNEDDLLRQFNLVKDDQGCQMTKVS----WNLISMKTHIGINRDEKNIHMAKEFPN 56
Query: 130 TD--TTSARKKIVYLSILYLRIPEHFRIILRGQVVKLHNIADDLKHIQYILYTPQSG 184
+ T Y SILYLR P F+II+ G+ + HNI +D+ Q + PQ+G
Sbjct: 57 SRHFLTYRHSLRSYASILYLRFPSGFQIIICGKDILHHNIVNDMMMYQEVTNRPQAG 113