Miyakogusa Predicted Gene

Lj4g3v1474120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1474120.1 Non Chatacterized Hit- tr|B9RAZ5|B9RAZ5_RICCO
Zinc finger protein, putative OS=Ricinus communis
GN=R,38.64,7e-19,seg,NULL; coiled-coil,NULL,CUFF.49286.1
         (170 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g35870.1                                                        89   2e-18

>Glyma04g35870.1 
          Length = 688

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/173 (34%), Positives = 82/173 (47%), Gaps = 19/173 (10%)

Query: 1   MALEYWDYHCHLIGYPEVKHKAPVSQCFSSMQEPLAI------------VIXX------X 42
           M  EYWD HC L GY +   K  +    +SMQ+PLAI            V+         
Sbjct: 510 MTWEYWDTHCTLFGYKDKDKKK-LPPRVTSMQKPLAIEKPVMLNRSCSPVVNTKIEYGNS 568

Query: 43  XXXXXXXXXRYEQAPLAKRKTRGFIDPHKAKRQSAELNVIGVSCSQNVQTMASPADQVVD 102
                    R EQ    KRKT   +D    ++ +   NV  V  SQN Q +A+PADQV D
Sbjct: 569 EQCSTKLQIRSEQGSHNKRKTHELVDLQNTEKHARTENVTCVGFSQNKQIIATPADQVFD 628

Query: 103 QEAINIIEANKNLIAXXXXXXXXXXXXXXKVAQLRSKVEEAQHEYNRLLAEAQ 155
           ++ +++++ NK L A              KV  L+S+++EAQ EY RLLAE +
Sbjct: 629 RKTMHLVQQNKKLHAKCLEFEKTGEELNLKVTMLKSEIQEAQDEYKRLLAEVK 681