Miyakogusa Predicted Gene

Lj4g3v1464060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1464060.1 Non Chatacterized Hit- tr|D7M2X3|D7M2X3_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,30,6e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.49293.1
         (533 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g00660.1                                                       345   1e-94
Glyma02g47930.1                                                       308   1e-83
Glyma14g35890.1                                                       109   8e-24
Glyma02g37600.2                                                       105   9e-23
Glyma02g37600.3                                                       105   9e-23
Glyma02g37600.1                                                       105   9e-23
Glyma20g04060.1                                                        65   2e-10
Glyma08g25110.1                                                        62   2e-09
Glyma19g10250.1                                                        55   2e-07

>Glyma14g00660.1 
          Length = 1021

 Score =  345 bits (884), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 194/327 (59%), Positives = 222/327 (67%), Gaps = 24/327 (7%)

Query: 191 IQLQKHVHLHNQNLNC-LDDPAELATPSAPPAPITDADF--------SLENEP-DHHGIG 240
           +QLQK VHL  +N+NC  DD   L TPSAPP  I D+DF        SL NEP D  G  
Sbjct: 19  VQLQKQVHL--RNVNCPDDDTVGLGTPSAPP--IIDSDFPLERDSECSLRNEPTDPPGSW 74

Query: 241 ---SSVDCDGRRSESSVEQTPS--AVAKDPDIVQRQDTTFTQDMERQPPH--LQCYNTSR 293
               S+D DG +SE+S+EQ P    VAK P + +   ++    +        + CY +S 
Sbjct: 75  PSRESLDYDGTKSETSIEQKPKPETVAK-PTVAELAQSSLEIHIYMLTSFYGMLCYFSS- 132

Query: 294 CNSQYAWQTLITYDACIRLCLQSWAKGCTEAPEFLKDECLALRAAFGLHEFLLQPRGVKP 353
           CNSQYAWQTLITYDACIRLCLQ+WAKGCTEAPEFLKDECLALR+AFGLHEFLLQPRGVKP
Sbjct: 133 CNSQYAWQTLITYDACIRLCLQAWAKGCTEAPEFLKDECLALRSAFGLHEFLLQPRGVKP 192

Query: 354 PEGISTRPSEQTIPLKMNKAVGKIRVEVXXXXXXXXXXXXSANSQQGGSIYMQAGMDYVR 413
            EG +TR  EQT+PLK+ K VGKIRVEV               SQ+ GSIYMQ G++YVR
Sbjct: 193 TEGRNTRNLEQTVPLKIKKVVGKIRVEVKKLRIIPRQKLNITKSQR-GSIYMQTGVEYVR 251

Query: 414 QVSSIVKXXXXXXXXXXXXXXXEEPLYCLLQLKSATEENESESCSAIFLRPGNRDYHDFF 473
            VSS+VK               EEPL+C +QLKS  EENESE CSAI LRPG+ DYHDFF
Sbjct: 252 HVSSLVKNGINSMKAASFSLASEEPLHCSIQLKSTMEENESEPCSAILLRPGSGDYHDFF 311

Query: 474 PLSQGDALLVEVQDSKKTVHGEARIPI 500
           PLSQGDAL+VEVQDSKK VHGE RIPI
Sbjct: 312 PLSQGDALIVEVQDSKKVVHGETRIPI 338


>Glyma02g47930.1 
          Length = 888

 Score =  308 bits (789), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 148/207 (71%), Positives = 163/207 (78%), Gaps = 1/207 (0%)

Query: 294 CNSQYAWQTLITYDACIRLCLQSWAKGCTEAPEFLKDECLALRAAFGLHEFLLQPRGVKP 353
           CNSQ+AWQTLITYDACIRLCLQ+WAKGCTEAPEFLKDECLALR+AFGLHEFLLQPRGVKP
Sbjct: 2   CNSQFAWQTLITYDACIRLCLQAWAKGCTEAPEFLKDECLALRSAFGLHEFLLQPRGVKP 61

Query: 354 PEGISTRPSEQTIPLKMNKAVGKIRVEVXXXXXXXXXXXXSANSQQGGSIYMQAGMDYVR 413
            EG + R SEQT+PLK  K VGKIRVEV               SQ+ GSIYM+AG++YVR
Sbjct: 62  TEGRNNRNSEQTLPLKTKKVVGKIRVEVKKLRIIPRQKLKITKSQR-GSIYMKAGVEYVR 120

Query: 414 QVSSIVKXXXXXXXXXXXXXXXEEPLYCLLQLKSATEENESESCSAIFLRPGNRDYHDFF 473
            VSS+VK               EEPL+CL+QLKS TEENESE CSAI LRPG+ DYHDFF
Sbjct: 121 HVSSLVKNGINSMKAASFSLAAEEPLHCLIQLKSTTEENESEPCSAILLRPGSGDYHDFF 180

Query: 474 PLSQGDALLVEVQDSKKTVHGEARIPI 500
           PLSQGDAL+VEVQDSKK VHGEARIP+
Sbjct: 181 PLSQGDALIVEVQDSKKVVHGEARIPM 207


>Glyma14g35890.1 
          Length = 1220

 Score =  109 bits (273), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 141/351 (40%), Gaps = 71/351 (20%)

Query: 207 LDDPAELATPSAPPAPITDADFSLENEPDHHGI-GSSVDCDGRRSESSVEQTPSAVAKD- 264
           + D  E   PSAPP     A  + E    H  I  S VD    ++ESS  ++ S    + 
Sbjct: 197 ISDDEEDDIPSAPPF----AGSTQEIRQTHEEIPASRVDATPNKAESSSLKSMSGDKIEN 252

Query: 265 ------PDIVQRQDT--TFTQDMERQPPHLQCYNTSRCNSQYAWQTLITYDACIRLCLQS 316
                 PD   R  T           PP L  ++ S       W  +I YDAC+RLCL +
Sbjct: 253 HVENGSPDQFARTATGSEAATSSNSHPPRLPTFHASALG---PWHGVIAYDACVRLCLHA 309

Query: 317 WAKGCTEAPEFLKDECLALRAAFGLHEFLLQPRGVKPPEGISTRPSEQTIPLKMNKAVGK 376
           WA  C EAP FL++EC  LR AFGL + LLQ    +     +  PS + +  K  K +GK
Sbjct: 310 WAMQCMEAPMFLENECALLRDAFGLRQILLQSED-ELMVKCNAEPSSEGVAPKPKKLIGK 368

Query: 377 IRVEVXXXXX---------------------------XXXXXXXSANSQ----------- 398
           ++V+V                                       SA  Q           
Sbjct: 369 MKVQVRKVKMGLDPPTGCSMSSIMTHNIKMESVRHRFSNLQSSLSAGWQALRRIRFLPRL 428

Query: 399 -QGGSIYMQ------AGMDYVRQVSSIVK--XXXXXXXXXXXXXXXEEPLYCLLQLKSAT 449
              GS+  Q      A   Y++QVS ++K                 +E   C L+LKS  
Sbjct: 429 PANGSLARQSLAYVHASTRYIQQVSGLLKVGVVTTLRNNSSSYEVGQETYSCFLRLKSTV 488

Query: 450 EENESESCSAIFLRPGNRDYHDFFPLSQGDALLVEVQDSKKTVHGEARIPI 500
           EE+      AI L+PG+ + H FFP S GD L+VEVQDSK    G   + +
Sbjct: 489 EED------AIRLQPGSSEVHMFFPDSLGDDLIVEVQDSKGKHFGRVLVQV 533


>Glyma02g37600.2 
          Length = 1108

 Score =  105 bits (263), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 113/265 (42%), Gaps = 55/265 (20%)

Query: 282 QPPHLQCYNTSRCNSQYAWQTLITYDACIRLCLQSWAKGCTEAPEFLKDECLALRAAFGL 341
            PP L  ++ S       W  +I YDAC+RLCL +WA  C EAP FL++EC  LR AFGL
Sbjct: 301 HPPRLPTFHASALG---PWHGVIAYDACVRLCLHAWAMQCMEAPMFLENECALLRDAFGL 357

Query: 342 HEFLLQ--------------PRGVKP-PEGISTRPSEQTIPLKM-----------NKAVG 375
            + LLQ                GV P P+ +  +   Q   +KM           +    
Sbjct: 358 RQILLQSEDELMVKCNAEPSSEGVAPKPKKLIGKMKVQVRKVKMGLDPPTGCSMSSIMTH 417

Query: 376 KIRVEVXXXXXXXXXXXXSANSQ------------QGGSI------YMQAGMDYVRQVSS 417
           KI++E             SA  Q              GS+      Y+ A   Y++QVS 
Sbjct: 418 KIKMESVRHHFSNLQSSLSAGWQALRRIRFIPRLPANGSLARQSLAYVHASTRYIQQVSG 477

Query: 418 IVKXXXXXXXX--XXXXXXXEEPLYCLLQLKSATEENESESCSAIFLRPGNRDYHDFFPL 475
           ++K                 +E   C L+LKS  EE+      AI L+PG+ + H FFP 
Sbjct: 478 LLKVGVVTTLRNNSSSYEVGQETYSCSLRLKSTVEED------AIRLQPGSSEVHMFFPD 531

Query: 476 SQGDALLVEVQDSKKTVHGEARIPI 500
           S GD L+VEVQ+S     G   + +
Sbjct: 532 SLGDDLIVEVQESNGKHFGRVLVQV 556


>Glyma02g37600.3 
          Length = 1233

 Score =  105 bits (263), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 113/265 (42%), Gaps = 55/265 (20%)

Query: 282 QPPHLQCYNTSRCNSQYAWQTLITYDACIRLCLQSWAKGCTEAPEFLKDECLALRAAFGL 341
            PP L  ++ S       W  +I YDAC+RLCL +WA  C EAP FL++EC  LR AFGL
Sbjct: 301 HPPRLPTFHASALG---PWHGVIAYDACVRLCLHAWAMQCMEAPMFLENECALLRDAFGL 357

Query: 342 HEFLLQ--------------PRGVKP-PEGISTRPSEQTIPLKM-----------NKAVG 375
            + LLQ                GV P P+ +  +   Q   +KM           +    
Sbjct: 358 RQILLQSEDELMVKCNAEPSSEGVAPKPKKLIGKMKVQVRKVKMGLDPPTGCSMSSIMTH 417

Query: 376 KIRVEVXXXXXXXXXXXXSANSQ------------QGGSI------YMQAGMDYVRQVSS 417
           KI++E             SA  Q              GS+      Y+ A   Y++QVS 
Sbjct: 418 KIKMESVRHHFSNLQSSLSAGWQALRRIRFIPRLPANGSLARQSLAYVHASTRYIQQVSG 477

Query: 418 IVKXXXXXXXX--XXXXXXXEEPLYCLLQLKSATEENESESCSAIFLRPGNRDYHDFFPL 475
           ++K                 +E   C L+LKS  EE+      AI L+PG+ + H FFP 
Sbjct: 478 LLKVGVVTTLRNNSSSYEVGQETYSCSLRLKSTVEED------AIRLQPGSSEVHMFFPD 531

Query: 476 SQGDALLVEVQDSKKTVHGEARIPI 500
           S GD L+VEVQ+S     G   + +
Sbjct: 532 SLGDDLIVEVQESNGKHFGRVLVQV 556


>Glyma02g37600.1 
          Length = 1234

 Score =  105 bits (263), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 113/265 (42%), Gaps = 55/265 (20%)

Query: 282 QPPHLQCYNTSRCNSQYAWQTLITYDACIRLCLQSWAKGCTEAPEFLKDECLALRAAFGL 341
            PP L  ++ S       W  +I YDAC+RLCL +WA  C EAP FL++EC  LR AFGL
Sbjct: 302 HPPRLPTFHASALG---PWHGVIAYDACVRLCLHAWAMQCMEAPMFLENECALLRDAFGL 358

Query: 342 HEFLLQ--------------PRGVKP-PEGISTRPSEQTIPLKM-----------NKAVG 375
            + LLQ                GV P P+ +  +   Q   +KM           +    
Sbjct: 359 RQILLQSEDELMVKCNAEPSSEGVAPKPKKLIGKMKVQVRKVKMGLDPPTGCSMSSIMTH 418

Query: 376 KIRVEVXXXXXXXXXXXXSANSQ------------QGGSI------YMQAGMDYVRQVSS 417
           KI++E             SA  Q              GS+      Y+ A   Y++QVS 
Sbjct: 419 KIKMESVRHHFSNLQSSLSAGWQALRRIRFIPRLPANGSLARQSLAYVHASTRYIQQVSG 478

Query: 418 IVKXXXXXXXX--XXXXXXXEEPLYCLLQLKSATEENESESCSAIFLRPGNRDYHDFFPL 475
           ++K                 +E   C L+LKS  EE+      AI L+PG+ + H FFP 
Sbjct: 479 LLKVGVVTTLRNNSSSYEVGQETYSCSLRLKSTVEED------AIRLQPGSSEVHMFFPD 532

Query: 476 SQGDALLVEVQDSKKTVHGEARIPI 500
           S GD L+VEVQ+S     G   + +
Sbjct: 533 SLGDDLIVEVQESNGKHFGRVLVQV 557


>Glyma20g04060.1 
          Length = 125

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/47 (55%), Positives = 32/47 (68%)

Query: 300 WQTLITYDACIRLCLQSWAKGCTEAPEFLKDECLALRAAFGLHEFLL 346
           W  +I  DAC+RLCL +WA  C EAP FL++EC  LR AFG  + LL
Sbjct: 11  WHGVIANDACVRLCLHAWAMQCMEAPMFLENECALLRDAFGFPQLLL 57


>Glyma08g25110.1 
          Length = 189

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 32/47 (68%)

Query: 300 WQTLITYDACIRLCLQSWAKGCTEAPEFLKDECLALRAAFGLHEFLL 346
           W  +I  DAC+RLCL +WA  C EAP FL++EC  LR AFG + F L
Sbjct: 53  WHGVIANDACVRLCLHAWAMQCMEAPMFLENECALLRDAFGWYCFTL 99


>Glyma19g10250.1 
          Length = 117

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 4/103 (3%)

Query: 239 IGSSVDCDGRRSESSV-EQTPSAVAKDPDIVQRQDTTFTQDMERQPPHLQCYNTSRCNSQ 297
           +G S++    R  + + E   S+V    ++     +T        PP L  ++ S     
Sbjct: 18  VGGSINAALPRGRTYLSEGYASSVPSRMNVKNIVLSTTATSSHSHPPRLPTFHASALG-- 75

Query: 298 YAWQTLITYDACIRLCLQSWAKGCTEAPEFLKDECLALRAAFG 340
             W  +I YD C  L L  WA  C E P FL++EC +LR AFG
Sbjct: 76  -PWHGVIAYDDCAHLFLHDWAMQCMEGPMFLENECASLRDAFG 117