Miyakogusa Predicted Gene

Lj4g3v1453030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1453030.1 Non Chatacterized Hit- tr|C5YYH0|C5YYH0_SORBI
Putative uncharacterized protein Sb09g001173
OS=Sorghu,30.22,2e-18,coiled-coil,NULL; Spindle_Spc25,Chromosome
segregation protein Spc25; FAMILY NOT NAMED,NULL,CUFF.49281.1
         (307 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g02480.1                                                       451   e-127
Glyma04g35960.1                                                       358   5e-99
Glyma17g09430.1                                                       163   2e-40
Glyma06g18980.1                                                       149   5e-36
Glyma06g18990.1                                                        75   1e-13

>Glyma05g02480.1 
          Length = 305

 Score =  451 bits (1159), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/307 (72%), Positives = 252/307 (82%), Gaps = 2/307 (0%)

Query: 1   MESPTSVCDTEIPLQTQTIDSFTASHAKSLQSLRDTAQQTAQHRVQLEEVKGKLREAEDD 60
           MESP S+CDTEIPLQ Q+ID+FTAS+ KSL SLR TAQ+TA+ +VQL+EVK KLRE EDD
Sbjct: 1   MESPISICDTEIPLQMQSIDAFTASYVKSLHSLRATAQETARCQVQLDEVKSKLRETEDD 60

Query: 61  LVKALSVKTRKEARRMALLDAIASAKSRVDELSTSVQEHRAKTQEYXXXXXXXXXXXXXX 120
            VKAL+VKTRKEA+RMAL+DAIASAK+RV++L+ S+QE R K QEY              
Sbjct: 61  FVKALAVKTRKEAKRMALMDAIASAKARVEDLNASIQEQRTKKQEYAAFISQQSLALAAS 120

Query: 121 EGKLNECIEQKDETQEAMSWYNRVLGFHVKGGRGVKFTFKNINLNNPNEEYFFTIFHQNN 180
           EGKLNE IEQ DETQ A+SWYNRVLGFHVKGGRGVKFTFKNIN+NNP+EEYFFTIFH+N+
Sbjct: 121 EGKLNESIEQNDETQ-AISWYNRVLGFHVKGGRGVKFTFKNINMNNPDEEYFFTIFHEND 179

Query: 181 TYTLLNCEPSTDDIKELIHELNKTNDLFKFVRVMRKKFQEAVGQDVTTRGQVAHEESAFI 240
           TY+LL+CE S  D KELIHELNKTNDLFKFVR+MRKKFQE V Q      +  HEESAF 
Sbjct: 180 TYSLLSCEHSLRDTKELIHELNKTNDLFKFVRIMRKKFQEVVAQGNLVVTKDEHEESAFN 239

Query: 241 SASAPVLSMSSVRSDSTTKENEHRDEPAEGDTQIKKKQLLHRRVKSGVLSPGSASSVRQS 300
           SASAPVLSMSSVRSD   KENEH+ EP EG+ Q  KKQ +HRR+KS VLSPGSASSVRQS
Sbjct: 240 SASAPVLSMSSVRSDFLGKENEHQAEPIEGNKQF-KKQNVHRRLKSSVLSPGSASSVRQS 298

Query: 301 PRLKARK 307
           PRLKARK
Sbjct: 299 PRLKARK 305


>Glyma04g35960.1 
          Length = 298

 Score =  358 bits (918), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 175/302 (57%), Positives = 224/302 (74%), Gaps = 6/302 (1%)

Query: 6   SVCDTEIPLQTQTIDSFTASHAKSLQSLRDTAQQTAQHRVQLEEVKGKLREAEDDLVKAL 65
           S+CD +IPL+   ID+F AS+  SL SLR TA + A+ + +L EVK KLREAED+LVKAL
Sbjct: 3   SICDKDIPLRLHNIDAFIASYRNSLHSLRATALEAARSQSELAEVKAKLREAEDELVKAL 62

Query: 66  SVKTRKEARRMALLDAIASAKSRVDELSTSVQEHRAKTQEYXXXXXXXXXXXXXXEGKLN 125
           +VKTR+EA+RMAL +AI S K R+++L TS+Q+ R + +E               E K N
Sbjct: 63  AVKTRREAKRMALKEAIVSVKGRIEDLKTSIQKQRTQNEECATVVSHHRLVLEVSEQKSN 122

Query: 126 ECIEQKDETQEAMSWYNRVLGFHVKGGRGVKFTFKNINLNNPNEEYFFTIFHQNNTYTLL 185
           E  E +DE QEA+SWYNR+LGF ++GGRGVKF+FKNIN++NPNEE+FFTI H+++ YTLL
Sbjct: 123 ESSEHRDEVQEAISWYNRILGFQIEGGRGVKFSFKNINVDNPNEEFFFTIRHEDDVYTLL 182

Query: 186 NCEPSTDDIKELIHELNKTNDLFKFVRVMRKKFQEAVGQDVTTRGQVAHEESAFISASAP 245
           NC+PS  D  ELIHELN TN LFKFVR MRKKFQE V Q   +     H+ESAFISAS P
Sbjct: 183 NCKPSVKDTDELIHELNNTNGLFKFVRTMRKKFQEVVAQGRLSMTTNEHQESAFISASGP 242

Query: 246 VLSMSSVRSDSTTKENEHRDEPAEGDTQIKKKQLLHRRVKSGVLSPGSASSVRQSPRLKA 305
           VLS+S++     T++N+H+DEP +G+  + +KQ+  RRVKS +LSPGSASSVRQSPRLK 
Sbjct: 243 VLSISTI-----TEDNDHQDEPTKGNAHL-QKQVNRRRVKSAILSPGSASSVRQSPRLKV 296

Query: 306 RK 307
           RK
Sbjct: 297 RK 298


>Glyma17g09430.1 
          Length = 229

 Score =  163 bits (413), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/187 (51%), Positives = 116/187 (62%), Gaps = 37/187 (19%)

Query: 1   MESPTSVCDTEIPLQTQ-TIDSFTASHAKSLQSLRDTAQQTAQHR--------------- 44
           MESP S+ DTEIPLQ Q  ID+ TAS+ KSL SLR TAQ+TA+ +               
Sbjct: 1   MESPISIRDTEIPLQMQNIIDASTASYIKSLHSLRATAQETARCQDLRVLTPNPNPVHST 60

Query: 45  -----------------VQLEEVKGKLREAEDDLVKALSVKTRKEARRMALLDAIASAKS 87
                            VQL+EVK KLRE EDD VKAL+VKTRKEA+RMAL+D +ASAK+
Sbjct: 61  TFVLLAHSLTHHLSFSPVQLDEVKAKLRETEDDFVKALAVKTRKEAKRMALMDVVASAKA 120

Query: 88  RVDELSTSVQEHRAKTQEYXXXXXXXXXXXXXXEGKLNECIEQKDETQEAMSWYNRVLGF 147
           RV++LS S+++HR K QEY              +GKLNE IE+KDETQ  +SWYNRVLGF
Sbjct: 121 RVEDLSASIRDHRTKKQEY---AAFISLALAASKGKLNESIERKDETQ-VISWYNRVLGF 176

Query: 148 HVKGGRG 154
             K   G
Sbjct: 177 QGKEPSG 183


>Glyma06g18980.1 
          Length = 138

 Score =  149 bits (375), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 83/151 (54%), Positives = 102/151 (67%), Gaps = 31/151 (20%)

Query: 155 VKFTFKNINLNNPNEEYFFTIFHQNNTYTLLNCEPSTDDIKELIHELNKTNDLFKFVRVM 214
           VKFTFKNIN++NPNEE+FFTI  +++ YTLLNC+PS  D  E+IHELNKTN LFKFVR M
Sbjct: 1   VKFTFKNINVDNPNEEFFFTIRLEDDIYTLLNCKPSVKDTDEVIHELNKTNGLFKFVRTM 60

Query: 215 RKKFQEAVGQDVTTRGQVAHEESAFISASAPVLSMSSVRSDSTTKENEHRDEPAEGDTQI 274
           RKKFQEAV Q                     VLS+S++     T+ NE++DEP +G+  +
Sbjct: 61  RKKFQEAVAQ---------------------VLSISTI-----TEGNENQDEPIKGNAHL 94

Query: 275 KKKQLLHRRVKSGVLSPGSASSVRQSPRLKA 305
            +KQ+  RRVK    SPGSASSV QSPRLK 
Sbjct: 95  -QKQVNRRRVK----SPGSASSVCQSPRLKV 120


>Glyma06g18990.1 
          Length = 69

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/58 (58%), Positives = 47/58 (81%)

Query: 6  SVCDTEIPLQTQTIDSFTASHAKSLQSLRDTAQQTAQHRVQLEEVKGKLREAEDDLVK 63
          S+CDT+IPL+ Q ID+ TAS+  SLQSLR TA +TA+ + +L E++ KLREAEDDL++
Sbjct: 3  SICDTDIPLRLQNIDALTASYRNSLQSLRTTALETARSQSELTEIQAKLREAEDDLLR 60