Miyakogusa Predicted Gene

Lj4g3v1440950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1440950.1 tr|G7JGA9|G7JGA9_MEDTR Anaphase-promoting complex
subunit OS=Medicago truncatula GN=MTR_4g082260 PE=,55.56,4e-19,
,gene.g55140.t1.1
         (79 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g34170.1                                                        72   1e-13
Glyma18g04130.1                                                        69   1e-12

>Glyma11g34170.1 
          Length = 884

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/108 (51%), Positives = 65/108 (60%), Gaps = 30/108 (27%)

Query: 1   MENVAETNKNGGS-GNAQKLLGDDEEEDRSWDSVENQPRKEMAVYE-------------- 45
           +EN+AET+KNG S G AQ+LLG +EEE+RS  SVENQ RKEM VYE              
Sbjct: 776 VENMAETSKNGASTGCAQELLGGEEEEERSVASVENQLRKEMTVYEKFILGMLTNFGSMA 835

Query: 46  ---------MFCNANKS------QLQTFLSGLASEEKLELRDEIYILK 78
                    MFC A+        QLQ+FLSGL SEEKLELRD +Y LK
Sbjct: 836 LDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYFLK 883


>Glyma18g04130.1 
          Length = 876

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 64/108 (59%), Gaps = 30/108 (27%)

Query: 1   MENVAETNKNGGS-GNAQKLLGDDEEEDRSWDSVENQPRKEMAVYE-------------- 45
           +EN+AE +KNG S G AQ+LLG +EEE+RS  SVENQ RKEM VYE              
Sbjct: 768 VENMAEPSKNGASTGCAQELLGGEEEEERSVASVENQLRKEMTVYEEFILGMLTNFGSMA 827

Query: 46  ---------MFCNANKS------QLQTFLSGLASEEKLELRDEIYILK 78
                    +FC A+        QLQ+FLSGL SEEKLELRD +Y LK
Sbjct: 828 LDRIHNTLKVFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYFLK 875