Miyakogusa Predicted Gene
- Lj4g3v1440680.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1440680.1 Non Chatacterized Hit- tr|J3MDD2|J3MDD2_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB06G2,38.89,1e-18,Usp,UspA; no description,Rossmann-like
alpha/beta/alpha sandwich fold; Adenine nucleotide alpha
hydr,CUFF.49246.1
(253 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g00880.1 113 2e-25
Glyma15g12740.1 107 1e-23
Glyma07g39900.1 104 7e-23
Glyma15g12750.1 102 3e-22
Glyma09g01790.1 102 4e-22
Glyma09g01790.3 100 1e-21
Glyma17g00870.1 83 3e-16
Glyma15g12750.2 79 7e-15
Glyma11g14870.1 78 9e-15
Glyma09g01790.2 71 1e-12
Glyma15g04350.1 62 7e-10
Glyma13g41070.1 61 1e-09
Glyma09g39520.1 59 4e-09
Glyma04g14270.1 56 4e-08
Glyma18g46750.1 55 5e-08
Glyma05g36460.1 52 6e-07
Glyma07g07650.1 50 2e-06
Glyma01g02780.1 48 1e-05
>Glyma17g00880.1
Length = 246
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 84/124 (67%), Gaps = 6/124 (4%)
Query: 125 LYVAVGKDD--LDVVKWALDH--AVSPGSRIFLVHVSPPITLIPTP--VGMFERSQLAPN 178
+YVAVGK D +D + WAL++ A SP + I+L+HV P I IP P +GM R+Q++
Sbjct: 40 VYVAVGKSDTSMDALSWALNNFVAQSPSTIIYLIHVFPQINHIPNPLGIGMIPRNQVSAE 99
Query: 179 QVRLYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILDLISILNITNLVIG 238
QV YI++ KR++LLQK++Q + +KV +T+L+ES+ KAILDLI IL I LVIG
Sbjct: 100 QVESYIDQERGKRRELLQKFLQSCSTSKVKVDTILIESDSVAKAILDLIPILQIKRLVIG 159
Query: 239 IKKL 242
KL
Sbjct: 160 ANKL 163
>Glyma15g12740.1
Length = 246
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 86/133 (64%), Gaps = 4/133 (3%)
Query: 113 SITENKDRKVDDLYVAVGKDD--LDVVKWALDHAVSPGSRIFLVHVSPPITLIPTP--VG 168
+I E ++ D +YVAVGK ++ + W L++ +P + ++L+H+ P I L+P P VG
Sbjct: 39 TIGEEENEDEDTVYVAVGKSQSSMEALAWTLNNLATPSTMLYLIHIFPEIKLLPNPLGVG 98
Query: 169 MFERSQLAPNQVRLYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILDLIS 228
M + Q++P QV Y+ + KR++LL K++Q+ + +KV +T+L+ES+ KAI+DLI
Sbjct: 99 MIPKDQVSPEQVESYMAQERGKRRELLNKFLQLCSASKVKVDTILIESDLIAKAIIDLIP 158
Query: 229 ILNITNLVIGIKK 241
IL + LVIG K
Sbjct: 159 ILQMRKLVIGASK 171
>Glyma07g39900.1
Length = 295
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
Query: 123 DDLYVAVGKD---DLDVVKWALDHAVSPGSRIFLVHVSPPITLIPTPVGMFERSQLAPNQ 179
D +YVAVGKD ++ + WAL HAV+P + + +VHV P + LIP+P+G RS +
Sbjct: 85 DVVYVAVGKDGDSSMEALSWALKHAVTPSATVCIVHVFPQVKLIPSPLGKIPRSHVNLEY 144
Query: 180 VRLYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILDLISILNITNLVIGI 239
V +++ + KRK LLQK+ + ++KV E L+E ++ K I+DL+ LNI LVIGI
Sbjct: 145 VNMHLTQEKGKRKLLLQKFTDLCVDSKVKVEMKLIEGDNVAKTIVDLVGNLNIRKLVIGI 204
Query: 240 KK 241
K
Sbjct: 205 TK 206
>Glyma15g12750.1
Length = 287
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 75/117 (64%)
Query: 130 GKDDLDVVKWALDHAVSPGSRIFLVHVSPPITLIPTPVGMFERSQLAPNQVRLYINEVHN 189
G+ ++ + W L+HAV+P + ++LVHV P I L+P+P G F RS + P V ++ + +
Sbjct: 91 GESSMEALLWTLNHAVTPSTTVYLVHVFPEIRLVPSPFGKFPRSHVNPEYVNFHLTQQKS 150
Query: 190 KRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILDLISILNITNLVIGIKKLPYSR 246
K K+LLQK+I + ++KV E +L+E ++ KAI D + + +I LVIGI K S+
Sbjct: 151 KTKELLQKFIDLCLDSKVKVEIMLIEGDNIAKAITDHVRVHSIRKLVIGITKSNLSK 207
>Glyma09g01790.1
Length = 240
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 78/121 (64%), Gaps = 4/121 (3%)
Query: 125 LYVAVGKDD--LDVVKWALDHAVSPGSRIFLVHVSPPITLIPTP--VGMFERSQLAPNQV 180
+YVAVGK + + W L++ +P + +F++HV P I L+P P VGM + Q++P QV
Sbjct: 52 VYVAVGKSQSSTEALAWTLNNLATPSTMLFIIHVFPEIKLLPNPLGVGMIPKDQVSPEQV 111
Query: 181 RLYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILDLISILNITNLVIGIK 240
Y+ + R++LL K++Q+ + +KV +T+L+ES+ KAI+DLI IL I LVIG
Sbjct: 112 ESYMAQERGNRRELLNKFLQLCSASKVKVDTILIESDLIAKAIIDLIPILQIKKLVIGAN 171
Query: 241 K 241
K
Sbjct: 172 K 172
>Glyma09g01790.3
Length = 176
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 78/121 (64%), Gaps = 4/121 (3%)
Query: 125 LYVAVGKDD--LDVVKWALDHAVSPGSRIFLVHVSPPITLIPTP--VGMFERSQLAPNQV 180
+YVAVGK + + W L++ +P + +F++HV P I L+P P VGM + Q++P QV
Sbjct: 52 VYVAVGKSQSSTEALAWTLNNLATPSTMLFIIHVFPEIKLLPNPLGVGMIPKDQVSPEQV 111
Query: 181 RLYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILDLISILNITNLVIGIK 240
Y+ + R++LL K++Q+ + +KV +T+L+ES+ KAI+DLI IL I LVIG
Sbjct: 112 ESYMAQERGNRRELLNKFLQLCSASKVKVDTILIESDLIAKAIIDLIPILQIKKLVIGAN 171
Query: 241 K 241
K
Sbjct: 172 K 172
>Glyma17g00870.1
Length = 273
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 14/122 (11%)
Query: 123 DDLYVAVGKD---DLDVVKWALDHAVSPGSRIFLVHVSPPITLIPTPVGMFERSQLAPNQ 179
D +YVAVG D + + WA HA++P + TLIP+P+G RS +
Sbjct: 66 DVVYVAVGNDGDSSTEALSWASKHAMTPSA-----------TLIPSPLGKIPRSHVNLEN 114
Query: 180 VRLYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILDLISILNITNLVIGI 239
V +++ + KRK LLQK+I + ++KV E L+E ++ +AI+DL+ LNI LVIGI
Sbjct: 115 VNMHLTQEKGKRKLLLQKFIDLCVDSKVKVEMKLIEGDNAARAIVDLVENLNIRKLVIGI 174
Query: 240 KK 241
+
Sbjct: 175 TQ 176
>Glyma15g12750.2
Length = 190
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%)
Query: 130 GKDDLDVVKWALDHAVSPGSRIFLVHVSPPITLIPTPVGMFERSQLAPNQVRLYINEVHN 189
G+ ++ + W L+HAV+P + ++LVHV P I L+P+P G F RS + P V ++ + +
Sbjct: 91 GESSMEALLWTLNHAVTPSTTVYLVHVFPEIRLVPSPFGKFPRSHVNPEYVNFHLTQQKS 150
Query: 190 KRKDLLQKYIQMSTEAKVAAET 211
K K+LLQK+I + ++K+ T
Sbjct: 151 KTKELLQKFIDLCLDSKITVIT 172
>Glyma11g14870.1
Length = 131
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 125 LYVAVGKD---DLDVVKWALDHAVSPGSRIFLVHVSPPITLIPTPVGMFERSQLAPNQVR 181
++VAVGK +++W H P +IFL+HV P T+IPT +G SQ +P V
Sbjct: 12 VHVAVGKSLKKAATLLQWCFTHFSKP--QIFLLHVHQPSTMIPTLLGKLPASQASPEVVS 69
Query: 182 LYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILDLISILNITNLVIG 238
Y E K LL+KY+ + AKV A +++ E++ K I+DL+++ N+ LVIG
Sbjct: 70 AYRIEEKEDTKRLLEKYLSLCRAAKVKASSVIGEADQVQKGIVDLVTVHNVRKLVIG 126
>Glyma09g01790.2
Length = 156
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Query: 125 LYVAVGKDD--LDVVKWALDHAVSPGSRIFLVHVSPPITLIPTP--VGMFERSQLAPNQV 180
+YVAVGK + + W L++ +P + +F++HV P I L+P P VGM + Q++P QV
Sbjct: 52 VYVAVGKSQSSTEALAWTLNNLATPSTMLFIIHVFPEIKLLPNPLGVGMIPKDQVSPEQV 111
Query: 181 RLYINEVHNKRKDLLQKYIQMSTEAKV 207
Y+ + R++LL K++Q+ + +KV
Sbjct: 112 ESYMAQERGNRRELLNKFLQLCSASKV 138
>Glyma15g04350.1
Length = 817
Score = 61.6 bits (148), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 122 VDDLYVAVGKDDLD----VVKWALDHAVSPGSRIFLVHVSPPITLIPTPVGMFERSQLAP 177
+ ++VAVGK LD +++W L+H + + I +VH P IPT +G SQ +P
Sbjct: 39 ISKVHVAVGKS-LDKAVPLLRWTLNHFRN--AEIVIVHAYQPSLTIPTLLGKLPASQASP 95
Query: 178 NQVRLYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILDLISILNITNLVI 237
V + + LL KY+ + A+V A ++ E++ K I+DL+ NI LVI
Sbjct: 96 AVVSAFRKAEREQTVKLLDKYLSICRAARVRASVIVTEADQVQKGIVDLVIKHNIEKLVI 155
Query: 238 G 238
G
Sbjct: 156 G 156
>Glyma13g41070.1
Length = 794
Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 122 VDDLYVAVGKDDLDVV---KWALDHAVSPGSRIFLVHVSPPITLIPTPVGMFERSQLAPN 178
+ ++VAVGK VV +W L+H + + I +VH P IPT +G SQ +P
Sbjct: 39 ISKVHVAVGKSLDKVVPLLRWTLNHFRN--AEIVIVHAYQPSLTIPTLLGKLPASQASPA 96
Query: 179 QVRLYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILDLISILNITNLVIG 238
V + + LL KY+ + A+V A ++ E++ K I+DL+ NI LVIG
Sbjct: 97 VVSAFRKVEREQIMKLLDKYLSICRAARVKAAIIVTEADQVQKGIVDLVIKHNIEKLVIG 156
>Glyma09g39520.1
Length = 202
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 96 TSRMLSTEIVEIVEDGRSITENKDRKVDD--LYVAVGKD----DLDVVKWALDHAVSPGS 149
T RM S ++ + G I E + +V D +YVAV K+ L+++ WA+ S G
Sbjct: 11 TQRMGSVRLLS--DAGGEILEEPNPRVVDQPIYVAVTKEVKESKLNLI-WAIQ--TSGGK 65
Query: 150 RIFLVHVSPPITLIPTPVGMFERSQLAPNQVRLYINEVHNKRKDLLQKYIQMSTEAKVAA 209
RI +++V T+IP G F S L QV Y E +L +Y+ + V A
Sbjct: 66 RICILYVHVRATMIPLLGGKFPASTLKEEQVEAYWEEERQGMHGILDEYLCICQRMGVRA 125
Query: 210 ETLLLESNDTGKAILDLISILNITNLVIG 238
E L +E + K IL+LIS I LV+G
Sbjct: 126 EKLHIEMDSIEKGILELISQHGIRKLVMG 154
>Glyma04g14270.1
Length = 810
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 114 ITENKDRKVDDLYVAVGKDDLDVVKWALDHAVSPGSRIF-LVHVSPPITLIPTPVG-MFE 171
++++ V L + K VV+WAL+ V G IF L+HV I +PTP+G +
Sbjct: 1 MSQHSSSSVVALAIKGNKKSKYVVQWALNKFVPEGMIIFKLIHVHGGIKGVPTPLGNVIP 60
Query: 172 RSQLAPNQVRLYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILDLISILN 231
SQ+ + + EV + +L + +M + KV + +++ES+D AI D ++
Sbjct: 61 LSQVRNDVATAFKKEVEWQTNQMLLPFKRMCEQRKVHVDVIVIESDDVATAIADEVAKGA 120
Query: 232 ITNLVIG 238
IT LV+G
Sbjct: 121 ITKLVVG 127
>Glyma18g46750.1
Length = 910
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 111 GRSITENKDRKVDD-LYVAVGKD----DLDVVKWALDHAVSPGSRIFLVHVSPPITLIPT 165
G+ + E VD +YVAV K+ L+++ WA+ + S G RI +++V T++P
Sbjct: 25 GKFLEEPNPSVVDQPIYVAVTKEVKESRLNLI-WAIQN--SGGKRICILYVHVRATMVPL 81
Query: 166 PVGMFERSQLAPNQVRLYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILD 225
G F S L QV+ Y E +L Y+++ V AE L +E + K IL+
Sbjct: 82 LGGKFPASALKEEQVQAYWEEERQGMHRILDDYLRICQRMGVRAEKLHIEMDSIEKGILE 141
Query: 226 LISILNITNLVIG 238
LIS I LV+G
Sbjct: 142 LISQHGIQKLVMG 154
>Glyma05g36460.1
Length = 726
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 136 VVKWALDHAVSPGSRIFLVHVSPPITLIPTPVGMFERSQLAPNQVRLYINEVHNKRKDLL 195
KWA+D+ + + L+HV ++ IPTP G + + R Y+ ++ N+ K+L
Sbjct: 22 AAKWAVDNLLPKDQALLLLHVRQRVSSIPTPTGNLVSLEGNDDVARAYMQQMDNESKELF 81
Query: 196 QKYIQMSTEAKVAAETLLLESNDTGKAILDLISILNITNLVIG 238
+ + + +LLE D K +++ IS ++ LV+G
Sbjct: 82 ASFRVFCNRKSIQCKEILLEDMDISKGLIEGISKYSVELLVLG 124
>Glyma07g07650.1
Length = 866
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 123 DDLYVAVGKD---DLDVVKWALDHAVSPGSRIFLVHVSPPITLIPTPVGMFERSQLAPNQ 179
D +YVAVGK+ + WA+ + S G RI ++HV P +IP F S L +
Sbjct: 46 DTIYVAVGKNVKSSKSNLIWAIQN--SGGRRICILHVHVPAPMIPLMGAKFPASALREEE 103
Query: 180 VRLYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESNDTGKAILDLISILNITNLVIG 238
V+ Y K L Y+ + V A L +E + K I++LIS I LV+G
Sbjct: 104 VQDYHETERLKMYKTLDAYLSICQGMGVRAGKLQIEMDCIEKGIVELISQYGIQKLVMG 162
>Glyma01g02780.1
Length = 792
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 121 KVDDLYVAVGKDDLD---VVKWALDHAVSPGSRIFLVHVSPPIT--LIPTPVGMFERSQL 175
+ + +YVAVG D D + WAL S I ++H++ T + TP G +
Sbjct: 5 QTEKIYVAVGNDVQDGYKTLNWALKKWNSHPISIVILHLTHNSTKDYVHTPFGKLPARSV 64
Query: 176 APNQVRLYINEVHNKRKDLLQKYIQMSTEAKVAAETLLLESND--TGKAILDLISILNIT 233
+ ++++ + +K LL KYI KV AE L +E D K ++DLI L IT
Sbjct: 65 SEEKLQILRKDEQDKINKLLSKYIAFC--GKVPAEILEVEKFDEPMQKRVIDLIFGLGIT 122
Query: 234 NLVIGI 239
LV+G
Sbjct: 123 KLVMGF 128