Miyakogusa Predicted Gene

Lj4g3v1415270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1415270.1 Non Chatacterized Hit- tr|H9MCZ3|H9MCZ3_PINRA
Uncharacterized protein (Fragment) OS=Pinus radiata GN,64.18,6e-19,
,CUFF.49233.1
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g13390.1                                                       347   4e-96
Glyma05g02690.1                                                       324   3e-89

>Glyma17g13390.1 
          Length = 208

 Score =  347 bits (891), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 164/201 (81%), Positives = 182/201 (90%), Gaps = 1/201 (0%)

Query: 1   MAAHRVIIIASLL-FCLAGTCYGKVLFSSLKKTLDVTASPKHGQVVEAGLDTITVTWALN 59
           MAA   +++ASLL FCLAG+CYGKV FSSLK+TLDVTASPK  QV+EAGLD ITVTWALN
Sbjct: 1   MAAQGPVVVASLLIFCLAGSCYGKVHFSSLKRTLDVTASPKQEQVLEAGLDKITVTWALN 60

Query: 60  KTLPAGTDSSYKTIKVKLCYAPISQQDRAWRKTEDELSRDKTCQHKIVAKPYDASNKTVH 119
           KTLPAGTDS+YKTIK+KLCYAPISQ+DRAWRKTEDEL RDKTCQHKIVAKPYDASNKTV 
Sbjct: 61  KTLPAGTDSAYKTIKLKLCYAPISQKDRAWRKTEDELKRDKTCQHKIVAKPYDASNKTVQ 120

Query: 120 TFEWLIERDVPEATYFVRAYALDSNDVQVGYGQTSDAKKTSNLFKIQAITGRHLSLDICS 179
            FEWL+ERDVP+ATYFVRAYA DSND +V YGQT+DAKK++NLF+I A++GRH SLDICS
Sbjct: 121 RFEWLVERDVPKATYFVRAYAFDSNDEEVAYGQTTDAKKSTNLFEINAVSGRHASLDICS 180

Query: 180 ACFSAFSVVSLIFFFYIEKRK 200
            CFSAFSVVSL  FFYIEKRK
Sbjct: 181 ICFSAFSVVSLFVFFYIEKRK 201


>Glyma05g02690.1 
          Length = 208

 Score =  324 bits (831), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 162/201 (80%), Positives = 184/201 (91%), Gaps = 1/201 (0%)

Query: 1   MAAHRVIIIASLL-FCLAGTCYGKVLFSSLKKTLDVTASPKHGQVVEAGLDTITVTWALN 59
           MAA  ++++ASLL FCLAG+CYGKV FS+LK+TLDVTASPK GQV+EAGLD ITVTWALN
Sbjct: 1   MAAQGLVVVASLLIFCLAGSCYGKVHFSTLKRTLDVTASPKQGQVLEAGLDKITVTWALN 60

Query: 60  KTLPAGTDSSYKTIKVKLCYAPISQQDRAWRKTEDELSRDKTCQHKIVAKPYDASNKTVH 119
           KTLPAGTDS+YKTIK+KLCYAPISQ+DRAWRKTEDEL+RDKTCQHKIVAKPYDASNKTV 
Sbjct: 61  KTLPAGTDSAYKTIKLKLCYAPISQKDRAWRKTEDELNRDKTCQHKIVAKPYDASNKTVQ 120

Query: 120 TFEWLIERDVPEATYFVRAYALDSNDVQVGYGQTSDAKKTSNLFKIQAITGRHLSLDICS 179
            +EWL+ERDVP+ATYFVRAYA DSND +V YGQT+D KK++NLF+I A++GRH SLDICS
Sbjct: 121 RYEWLVERDVPKATYFVRAYAFDSNDAEVAYGQTTDGKKSTNLFEINAVSGRHASLDICS 180

Query: 180 ACFSAFSVVSLIFFFYIEKRK 200
            CFS FSVVSL FFFYIEKRK
Sbjct: 181 ICFSVFSVVSLFFFFYIEKRK 201