Miyakogusa Predicted Gene

Lj4g3v1389230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1389230.1 tr|Q42061|Q42061_ARATH Ribosomal protein PO
(Fragment) OS=Arabidopsis thaliana PE=2
SV=1,62.32,1e-17,Ribosomal_L10,Ribosomal protein L10/acidic P0; 60S
ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER,NULL,CUFF.49161.1
         (187 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g42270.1                                                       348   2e-96
Glyma14g06620.2                                                       345   2e-95
Glyma14g06620.1                                                       345   2e-95
Glyma14g06630.1                                                       159   1e-39
Glyma02g42260.2                                                       159   1e-39
Glyma02g42260.1                                                       159   2e-39
Glyma18g03300.1                                                       149   1e-36
Glyma11g35060.1                                                       149   2e-36
Glyma18g03290.1                                                        70   9e-13

>Glyma02g42270.1 
          Length = 187

 Score =  348 bits (892), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 164/187 (87%), Positives = 177/187 (94%)

Query: 1   MAGKVSKAAYDSKMCKLLREYSQVLVVSADNVGSNQLQGIRRALHGDSVVVMGKNSLMKR 60
           MAGKV+KAAYD+KM KLLREYSQVLVVS+DNVGSNQLQGIRR L+ DSVVVMGKNS+MKR
Sbjct: 1   MAGKVAKAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRGLNADSVVVMGKNSMMKR 60

Query: 61  SIIDDAEKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQVAKYKVVDPILMCPKYMTYD 120
           SII DA+KTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQ+AKYKVV PILMCPKY +YD
Sbjct: 61  SIILDAKKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVVQPILMCPKYTSYD 120

Query: 121 SYRTCSYLQSGQLPLGLTCCNQQSAQTSEPFLVCSKFLPHQHCHLMRSRQFLMTSIWAPF 180
           +Y+ C+Y+QSGQLPLGLTCCNQQSAQ SEPFLVCSKFLPHQHC LMRSRQFLMTSIW+P 
Sbjct: 121 TYQNCTYMQSGQLPLGLTCCNQQSAQASEPFLVCSKFLPHQHCFLMRSRQFLMTSIWSPL 180

Query: 181 LLLAGNL 187
           LLLAGNL
Sbjct: 181 LLLAGNL 187


>Glyma14g06620.2 
          Length = 187

 Score =  345 bits (884), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 161/187 (86%), Positives = 177/187 (94%)

Query: 1   MAGKVSKAAYDSKMCKLLREYSQVLVVSADNVGSNQLQGIRRALHGDSVVVMGKNSLMKR 60
           MAGKV+KAAYD+KM KLL+EYSQVLVVS+DNVGSNQLQGIRR L+ DSVVVMGKNS+MKR
Sbjct: 1   MAGKVAKAAYDAKMLKLLKEYSQVLVVSSDNVGSNQLQGIRRGLNADSVVVMGKNSMMKR 60

Query: 61  SIIDDAEKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQVAKYKVVDPILMCPKYMTYD 120
           SII DA+KTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQ+AKYKVV PILMCPKY +YD
Sbjct: 61  SIILDAQKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVVQPILMCPKYTSYD 120

Query: 121 SYRTCSYLQSGQLPLGLTCCNQQSAQTSEPFLVCSKFLPHQHCHLMRSRQFLMTSIWAPF 180
           +Y+ C+Y+QSGQ+PLGLTCCNQQS+Q SEPFLVCSKFLPHQHC LMRSRQFLMTSIW+P 
Sbjct: 121 TYQNCTYMQSGQIPLGLTCCNQQSSQASEPFLVCSKFLPHQHCFLMRSRQFLMTSIWSPL 180

Query: 181 LLLAGNL 187
           LLLAGNL
Sbjct: 181 LLLAGNL 187


>Glyma14g06620.1 
          Length = 187

 Score =  345 bits (884), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 161/187 (86%), Positives = 177/187 (94%)

Query: 1   MAGKVSKAAYDSKMCKLLREYSQVLVVSADNVGSNQLQGIRRALHGDSVVVMGKNSLMKR 60
           MAGKV+KAAYD+KM KLL+EYSQVLVVS+DNVGSNQLQGIRR L+ DSVVVMGKNS+MKR
Sbjct: 1   MAGKVAKAAYDAKMLKLLKEYSQVLVVSSDNVGSNQLQGIRRGLNADSVVVMGKNSMMKR 60

Query: 61  SIIDDAEKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQVAKYKVVDPILMCPKYMTYD 120
           SII DA+KTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQ+AKYKVV PILMCPKY +YD
Sbjct: 61  SIILDAQKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVVQPILMCPKYTSYD 120

Query: 121 SYRTCSYLQSGQLPLGLTCCNQQSAQTSEPFLVCSKFLPHQHCHLMRSRQFLMTSIWAPF 180
           +Y+ C+Y+QSGQ+PLGLTCCNQQS+Q SEPFLVCSKFLPHQHC LMRSRQFLMTSIW+P 
Sbjct: 121 TYQNCTYMQSGQIPLGLTCCNQQSSQASEPFLVCSKFLPHQHCFLMRSRQFLMTSIWSPL 180

Query: 181 LLLAGNL 187
           LLLAGNL
Sbjct: 181 LLLAGNL 187


>Glyma14g06630.1 
          Length = 319

 Score =  159 bits (402), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 88/170 (51%), Positives = 114/170 (67%), Gaps = 18/170 (10%)

Query: 1   MAGKVSKA----AYDSKMCKLLREYSQVLVVSADNVGSNQLQGIRRALHGDSVVVMGKNS 56
           MA K +KA    AYD+K+C L+ EY Q+LVV++DNVGSNQLQ IR+ L GDSVV+MGKN+
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 57  LMKRSIIDDAEKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQVAKYKVVDP------- 109
           +MKRS+   AEKTGN A+LNL+PLLVGNV LIFTKGDL+EVSE+VAKYKV  P       
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 110 ---ILMCPKYMTYDSYRTCSYLQSGQLPLGLTCCNQQSAQTSEPFLVCSK 156
              +++ P     D  +T S+ Q   +P   T  N+ + +   P  +  K
Sbjct: 121 PIDVVVPPGNTGLDPSQT-SFFQVLNIP---TKINKGTVEIITPVELIKK 166


>Glyma02g42260.2 
          Length = 273

 Score =  159 bits (402), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 88/170 (51%), Positives = 114/170 (67%), Gaps = 18/170 (10%)

Query: 1   MAGKVSKA----AYDSKMCKLLREYSQVLVVSADNVGSNQLQGIRRALHGDSVVVMGKNS 56
           MA K +KA    AYD+K+C L+ EY Q+LVV++DNVGSNQLQ IR+ L GDSVV+MGKN+
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 57  LMKRSIIDDAEKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQVAKYKVVDP------- 109
           +MKRS+   AEKTGN A+LNL+PLLVGNV LIFTKGDL+EVSE+VAKYKV  P       
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 110 ---ILMCPKYMTYDSYRTCSYLQSGQLPLGLTCCNQQSAQTSEPFLVCSK 156
              +++ P     D  +T S+ Q   +P   T  N+ + +   P  +  K
Sbjct: 121 PIDVVVPPGNTGLDPSQT-SFFQVLNIP---TKINKGTVEIITPVELIRK 166


>Glyma02g42260.1 
          Length = 320

 Score =  159 bits (402), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 88/170 (51%), Positives = 114/170 (67%), Gaps = 18/170 (10%)

Query: 1   MAGKVSKA----AYDSKMCKLLREYSQVLVVSADNVGSNQLQGIRRALHGDSVVVMGKNS 56
           MA K +KA    AYD+K+C L+ EY Q+LVV++DNVGSNQLQ IR+ L GDSVV+MGKN+
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 57  LMKRSIIDDAEKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQVAKYKVVDP------- 109
           +MKRS+   AEKTGN A+LNL+PLLVGNV LIFTKGDL+EVSE+VAKYKV  P       
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 110 ---ILMCPKYMTYDSYRTCSYLQSGQLPLGLTCCNQQSAQTSEPFLVCSK 156
              +++ P     D  +T S+ Q   +P   T  N+ + +   P  +  K
Sbjct: 121 PIDVVVPPGNTGLDPSQT-SFFQVLNIP---TKINKGTVEIITPVELIRK 166


>Glyma18g03300.1 
          Length = 317

 Score =  149 bits (377), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 108/164 (65%), Gaps = 18/164 (10%)

Query: 1   MAGKVSKA----AYDSKMCKLLREYSQVLVVSADNVGSNQLQGIRRALHGDSVVVMGKNS 56
           MA K++KA    AYD+K+CKLL  Y+Q+LVV+ADNVGSNQLQ IR  L GDSV++MGKN+
Sbjct: 1   MARKLTKAQKKIAYDAKLCKLLDNYTQILVVAADNVGSNQLQNIRHGLRGDSVILMGKNT 60

Query: 57  LMKRSIIDDAEKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQVAKYKVVDP------- 109
           +MKR+I   A+ TGN   LNL+PLLVGNV LIFTKGD++EV E V+KYKV  P       
Sbjct: 61  MMKRTIKIHAQNTGNTTILNLIPLLVGNVGLIFTKGDVKEVKEVVSKYKVAAPARVGLVA 120

Query: 110 ---ILMCPKYMTYDSYRTCSYLQSGQLPLGLTCCNQQSAQTSEP 150
              +++ P     D  +T S+ Q   +P   T  N+ + +   P
Sbjct: 121 PIDVVVPPGNTGLDPSQT-SFFQVLNIP---TKINKGTVEIITP 160


>Glyma11g35060.1 
          Length = 320

 Score =  149 bits (376), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 108/164 (65%), Gaps = 18/164 (10%)

Query: 1   MAGKVSKA----AYDSKMCKLLREYSQVLVVSADNVGSNQLQGIRRALHGDSVVVMGKNS 56
           MA K++KA    AYD+K+CKLL  Y+Q+LVV+ADNVGSNQLQ IR  L GDSV++MGKN+
Sbjct: 1   MARKLTKAQKKIAYDAKLCKLLDNYTQILVVAADNVGSNQLQNIRHGLRGDSVILMGKNT 60

Query: 57  LMKRSIIDDAEKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQVAKYKVVDP------- 109
           +MKRSI   A+ TG+   LNL+PLLVGNV LIFTKGD++EV E V+KYKV  P       
Sbjct: 61  MMKRSIKIHAQNTGDTTILNLIPLLVGNVGLIFTKGDVKEVKEVVSKYKVAAPARVGLVA 120

Query: 110 ---ILMCPKYMTYDSYRTCSYLQSGQLPLGLTCCNQQSAQTSEP 150
              +++ P     D  +T S+ Q   +P   T  N+ + +   P
Sbjct: 121 PIDVIVPPGNTGLDPSQT-SFFQVLNIP---TKINKGTVEIVTP 160


>Glyma18g03290.1 
          Length = 275

 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 19/103 (18%)

Query: 7   KAAYDSKMCKLLREYSQVLVVSADNVGSNQLQGIRRALHGDSVVVMGKNSLMKRSIIDDA 66
           K +YD K+C+LL +Y+Q+LVV+ADNVGSNQL+ IR+ L GDSV     +   +++I    
Sbjct: 11  KVSYDVKLCQLLEDYTQILVVAADNVGSNQLENIRKDLRGDSVDSFRDHR--QQTIPQPY 68

Query: 67  EKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQVAKYKVVDP 109
             +    + N                 L+EVSE+VA+YK+V P
Sbjct: 69  SPSSGHNWCN-----------------LKEVSEEVARYKLVAP 94