Miyakogusa Predicted Gene
- Lj4g3v1389120.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1389120.1 tr|I3SNP5|I3SNP5_LOTJA Nucleoside diphosphate
kinase OS=Lotus japonicus PE=2 SV=1,99.57,0,no description,Nucleoside
diphosphate kinase; Nucleoside diphosphate kinase, NDK,Nucleoside
diphosph,CUFF.49146.1
(232 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g03010.1 351 3e-97
Glyma17g13670.1 341 4e-94
Glyma05g36900.1 194 9e-50
Glyma07g13710.1 192 2e-49
Glyma08g02630.1 191 7e-49
Glyma08g02630.2 189 2e-48
Glyma08g02630.4 187 8e-48
Glyma08g02630.3 187 8e-48
Glyma03g25820.1 184 5e-47
Glyma14g33380.1 155 4e-38
Glyma07g29060.1 149 3e-36
Glyma20g08850.1 133 2e-31
Glyma16g01140.1 98 8e-21
Glyma15g23070.1 92 3e-19
Glyma07g04560.1 80 2e-15
Glyma10g27070.1 54 1e-07
>Glyma05g03010.1
Length = 225
Score = 351 bits (901), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 178/231 (77%), Positives = 191/231 (82%), Gaps = 26/231 (11%)
Query: 13 VTSSLALTPTTPFSSNKRTTITTSSSKCRIRATHHQNLTAFPSTSHLFY--------AKS 64
VTSSL +P + S + T HQ+LTAFPS SHLF AK+
Sbjct: 10 VTSSLPRSPKSTLSLFRST---------------HQHLTAFPSQSHLFLYHPPPYANAKT 54
Query: 65 LR---TTKPRIFLPHLIASLEQVDQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLY 121
LR ++KP IFLPHLIASLEQVDQTYIMVKPDGVQRG+VG+IISRFEKKGFKLTGLKL+
Sbjct: 55 LRARTSSKPAIFLPHLIASLEQVDQTYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLF 114
Query: 122 QCSKDLAEEHYKDLKLKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEP 181
QCSK+LAEEHYKDLK KSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEP
Sbjct: 115 QCSKELAEEHYKDLKQKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEP 174
Query: 182 GTIRGDLAVQTGRNIVHGSDSPENGKREIALWFKEGELCEWTPVLTPWLRE 232
GTIRGDLAVQTGRN+VHGSDSPENGKREIALWFKEGE+CEWTPV PWLRE
Sbjct: 175 GTIRGDLAVQTGRNVVHGSDSPENGKREIALWFKEGEVCEWTPVQAPWLRE 225
>Glyma17g13670.1
Length = 227
Score = 341 bits (874), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 177/244 (72%), Positives = 194/244 (79%), Gaps = 29/244 (11%)
Query: 1 MGVFAGTTAAACVTSSLALTP--TTPFSSNKRTTITTSSSKCRIRATHHQNLTAFPSTSH 58
M G+ ++ VTSSL +P T P RA++ Q+LTAFPS S
Sbjct: 1 MEAVCGSGSSVWVTSSLTRSPKITLPL----------------FRASY-QHLTAFPSQSL 43
Query: 59 LF------YAKS----LRTTKPRIFLPHLIASLEQVDQTYIMVKPDGVQRGVVGDIISRF 108
LF YA + RT+ IFLPHLIASLEQVDQTYIMVKPDGVQRG+VG+IISRF
Sbjct: 44 LFSYHPSRYANARTLRARTSSKPIFLPHLIASLEQVDQTYIMVKPDGVQRGLVGEIISRF 103
Query: 109 EKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFPKLIDYITSGPVVCMAWEGVGVVASAR 168
EKKGFKLTGLKL+QCSK+LAEEHYKDLK KSFFPKLIDYITSGPVVCMAWEGVGVVASAR
Sbjct: 104 EKKGFKLTGLKLFQCSKELAEEHYKDLKQKSFFPKLIDYITSGPVVCMAWEGVGVVASAR 163
Query: 169 KLIGATDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIALWFKEGELCEWTPVLTP 228
KLIGATDPLQAEPGTIRGDLAVQTGRN+VHGSDSPENGKREIALWFKEGE+C+WTPV +P
Sbjct: 164 KLIGATDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIALWFKEGEVCDWTPVQSP 223
Query: 229 WLRE 232
WLRE
Sbjct: 224 WLRE 227
>Glyma05g36900.1
Length = 235
Score = 194 bits (492), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 123/179 (68%), Gaps = 14/179 (7%)
Query: 52 AFPSTSHLFYAKSLRTTKPRIFLPHLIASLEQVDQTYIMVKPDGVQRGVVGDIISRFEKK 111
A P+ +++F + +R ++++T+I +KPDGVQRG++ +IISRFE+K
Sbjct: 67 ALPAAAYMFQDQEVRAA--------------ELERTFIAIKPDGVQRGLISEIISRFERK 112
Query: 112 GFKLTGLKLYQCSKDLAEEHYKDLKLKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLI 171
G+KL G+K+ SK+ A++HY DLK + FF L D+++SGPV+ M WEG GV++ RKLI
Sbjct: 113 GYKLVGIKVVIPSKEFAQKHYHDLKERPFFDGLCDFLSSGPVIAMVWEGQGVISYGRKLI 172
Query: 172 GATDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIALWFKEGELCEWTPVLTPWL 230
GATDP ++EPGTIRGDLAV GRNI+HGSD PE K EI LWFK EL +T W+
Sbjct: 173 GATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVSFTSNAEKWV 231
>Glyma07g13710.1
Length = 149
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 88/148 (59%), Positives = 108/148 (72%), Gaps = 1/148 (0%)
Query: 85 DQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFPKL 144
+QT+IM+KPDGVQRG++G+IISRFE+KGF L GLKL + AE+HY DL K FF L
Sbjct: 3 EQTFIMIKPDGVQRGLIGEIISRFERKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGL 62
Query: 145 IDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQTGRNIVHGSDSPE 204
+DYI SGPVV M WEG VV + RK+IGAT+P Q+EPGTIRGD A+ GRN++HGSDS E
Sbjct: 63 VDYIVSGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDSVE 122
Query: 205 NGKREIALWFKEGELCEWTPVLTPWLRE 232
+ +EIALWF EG W W+ E
Sbjct: 123 SANKEIALWFPEGP-ANWQSSQHSWIYE 149
>Glyma08g02630.1
Length = 236
Score = 191 bits (484), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 121/179 (67%), Gaps = 14/179 (7%)
Query: 52 AFPSTSHLFYAKSLRTTKPRIFLPHLIASLEQVDQTYIMVKPDGVQRGVVGDIISRFEKK 111
A P+ +++F + ++ ++++T+I +KPDGVQRG++ +IISRFE+K
Sbjct: 68 ALPAAAYMFQDQEVQAA--------------ELERTFIAIKPDGVQRGLISEIISRFERK 113
Query: 112 GFKLTGLKLYQCSKDLAEEHYKDLKLKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLI 171
G+KL G+K+ K+ A+ HY DLK + FF L D+++SGPV+ M WEG GV++ RKLI
Sbjct: 114 GYKLVGIKVVIPKKEFAQRHYHDLKERPFFDGLCDFLSSGPVIAMVWEGQGVISYGRKLI 173
Query: 172 GATDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIALWFKEGELCEWTPVLTPWL 230
GATDP ++EPGTIRGDLAV GRNI+HGSD PE K EI LWFK EL +T W+
Sbjct: 174 GATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVSFTSNAEKWI 232
>Glyma08g02630.2
Length = 159
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 112/150 (74%)
Query: 81 LEQVDQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSF 140
L Q+++T+I +KPDGVQRG++ +IISRFE+KG+KL G+K+ K+ A+ HY DLK + F
Sbjct: 6 LTQLERTFIAIKPDGVQRGLISEIISRFERKGYKLVGIKVVIPKKEFAQRHYHDLKERPF 65
Query: 141 FPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQTGRNIVHGS 200
F L D+++SGPV+ M WEG GV++ RKLIGATDP ++EPGTIRGDLAV GRNI+HGS
Sbjct: 66 FDGLCDFLSSGPVIAMVWEGQGVISYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGS 125
Query: 201 DSPENGKREIALWFKEGELCEWTPVLTPWL 230
D PE K EI LWFK EL +T W+
Sbjct: 126 DGPETAKDEIKLWFKPEELVSFTSNAEKWI 155
>Glyma08g02630.4
Length = 162
Score = 187 bits (475), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 111/148 (75%)
Query: 83 QVDQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFP 142
++++T+I +KPDGVQRG++ +IISRFE+KG+KL G+K+ K+ A+ HY DLK + FF
Sbjct: 11 ELERTFIAIKPDGVQRGLISEIISRFERKGYKLVGIKVVIPKKEFAQRHYHDLKERPFFD 70
Query: 143 KLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQTGRNIVHGSDS 202
L D+++SGPV+ M WEG GV++ RKLIGATDP ++EPGTIRGDLAV GRNI+HGSD
Sbjct: 71 GLCDFLSSGPVIAMVWEGQGVISYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDG 130
Query: 203 PENGKREIALWFKEGELCEWTPVLTPWL 230
PE K EI LWFK EL +T W+
Sbjct: 131 PETAKDEIKLWFKPEELVSFTSNAEKWI 158
>Glyma08g02630.3
Length = 162
Score = 187 bits (475), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 111/148 (75%)
Query: 83 QVDQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFP 142
++++T+I +KPDGVQRG++ +IISRFE+KG+KL G+K+ K+ A+ HY DLK + FF
Sbjct: 11 ELERTFIAIKPDGVQRGLISEIISRFERKGYKLVGIKVVIPKKEFAQRHYHDLKERPFFD 70
Query: 143 KLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQTGRNIVHGSDS 202
L D+++SGPV+ M WEG GV++ RKLIGATDP ++EPGTIRGDLAV GRNI+HGSD
Sbjct: 71 GLCDFLSSGPVIAMVWEGQGVISYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDG 130
Query: 203 PENGKREIALWFKEGELCEWTPVLTPWL 230
PE K EI LWFK EL +T W+
Sbjct: 131 PETAKDEIKLWFKPEELVSFTSNAEKWI 158
>Glyma03g25820.1
Length = 149
Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 86/148 (58%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 85 DQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFPKL 144
+QT+IM+KPDGVQRG++G+IISRFEKKGF L GLKL + AE+HY DL K FF L
Sbjct: 3 EQTFIMIKPDGVQRGLIGEIISRFEKKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGL 62
Query: 145 IDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQTGRNIVHGSDSPE 204
+DYI SGPVV M WEG VV + RK+IGAT+P Q+EPGTIRGD A+ GRN++HGSD+ E
Sbjct: 63 VDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAIE 122
Query: 205 NGKREIALWFKEGELCEWTPVLTPWLRE 232
+ +EIAL EG W W+ E
Sbjct: 123 SANKEIALGVPEGP-ANWQSSQHSWIYE 149
>Glyma14g33380.1
Length = 128
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 84/100 (84%), Gaps = 8/100 (8%)
Query: 130 EHYKDLKLKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLA 189
EHYKDLK K FFPKLIDYITSGPV+CMAWEGVGVVASARKLIGAT PLQAEPGTIRGDLA
Sbjct: 29 EHYKDLKQKLFFPKLIDYITSGPVMCMAWEGVGVVASARKLIGATYPLQAEPGTIRGDLA 88
Query: 190 VQTGRNIVHGSDSPENGKREIA-------LWFKEGELCEW 222
VQT RN+VHGSD+PENGK EI L+ +E + CE+
Sbjct: 89 VQTRRNVVHGSDNPENGKHEIVEPHLLGRLYCEESD-CEY 127
>Glyma07g29060.1
Length = 78
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/77 (90%), Positives = 73/77 (94%)
Query: 131 HYKDLKLKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAV 190
HYKDLK K FFPKLIDYITSGPVVCMAWEGVG+VASARKLIGAT PLQAEPGTIRGDLAV
Sbjct: 1 HYKDLKQKLFFPKLIDYITSGPVVCMAWEGVGIVASARKLIGATYPLQAEPGTIRGDLAV 60
Query: 191 QTGRNIVHGSDSPENGK 207
QT RN+VHGSD+PENGK
Sbjct: 61 QTRRNVVHGSDNPENGK 77
>Glyma20g08850.1
Length = 71
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/70 (90%), Positives = 65/70 (92%)
Query: 130 EHYKDLKLKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLA 189
EHYKDLK KSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGAT PLQAEP TIRGDL
Sbjct: 1 EHYKDLKQKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATYPLQAEPDTIRGDLT 60
Query: 190 VQTGRNIVHG 199
VQT +N+VHG
Sbjct: 61 VQTRKNVVHG 70
>Glyma16g01140.1
Length = 197
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Query: 83 QVDQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFP 142
+ ++T+ ++KPDG+ DI + GF++ K+ Q + + Y + KSFF
Sbjct: 32 ETEKTFAIIKPDGLLGNYTDDIKRTIVEYGFRILKEKIVQLDEGTVKSFYAEHSSKSFFS 91
Query: 143 KLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAE---PGTIRGDLAVQTGRNIVHG 199
LI Y+TSGPV+ M E +A R L+G TD +A+ P +IR + +N VHG
Sbjct: 92 SLIKYMTSGPVLIMVLEKDNAIADWRALMGPTDASKAKITHPHSIRAKCGLDMEKNCVHG 151
Query: 200 SDSPENGKREIALWFKE 216
SDSP++ +REI+ +FKE
Sbjct: 152 SDSPKSAQREISFFFKE 168
>Glyma15g23070.1
Length = 92
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 52/79 (65%), Gaps = 23/79 (29%)
Query: 132 YKDLKLKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQ 191
+KDLK KSFFPKLIDYITSGPVV AEPG IRGDLAVQ
Sbjct: 30 HKDLKQKSFFPKLIDYITSGPVV-----------------------SAEPGIIRGDLAVQ 66
Query: 192 TGRNIVHGSDSPENGKREI 210
GRN+VHGSDSP+NGKREI
Sbjct: 67 IGRNVVHGSDSPKNGKREI 85
>Glyma07g04560.1
Length = 119
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 10/117 (8%)
Query: 103 DIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFPKLIDYITSGPVVCMAWEGVG 162
+++S F++K K+ Q + + Y + KSFF LI Y+TSGPV+ M E
Sbjct: 2 NMVSEFKRK-------KMVQLDEATVKFFYAEHSSKSFFSSLIKYMTSGPVLVMVLEKDN 54
Query: 163 VVASARKLIGATDPLQAE---PGTIRGDLAVQTGRNIVHGSDSPENGKREIALWFKE 216
+A R L+G TD +A+ P +IR + +N VHGSDSP++ +REI +FKE
Sbjct: 55 AIADWRALMGPTDASKAKITHPHSIRAKSGLDVEKNCVHGSDSPKSAQREIPFFFKE 111
>Glyma10g27070.1
Length = 74
Score = 54.3 bits (129), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 151 GPVVCMAWEGVGVVASARKLIGATDPLQAE---PGTIRGDLAVQTGRNIVHGSDSPENGK 207
GPV+ M E +A R L+G T+ +A+ P +IR + N VHGSDSP++ +
Sbjct: 1 GPVLVMVLEKDNAIADWRALMGPTNASKAKITHPHSIRAKCGLDVENNCVHGSDSPKSAQ 60
Query: 208 REIALWFKE 216
REI +FKE
Sbjct: 61 REIPFFFKE 69