Miyakogusa Predicted Gene

Lj4g3v1329880.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1329880.1 Non Chatacterized Hit- tr|I1M541|I1M541_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41995 PE,88.86,0,ATPase
domain of HSP90 chaperone/DNA topoisomerase II/histidine
kinase,ATPase-like, ATP-binding doma,CUFF.48942.1
         (376 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g41790.1                                                       636   0.0  
Glyma18g05130.1                                                        77   2e-14

>Glyma13g41790.1 
          Length = 673

 Score =  636 bits (1640), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/342 (87%), Positives = 316/342 (92%)

Query: 27  ETILKQKSPAEFFAENKNIAGFDNAGKSLYTTVRELVENSLDSAESISVLPVVEVTIEEI 86
           ETILKQKSPAEFFAENKNIAGFDN GKSLYTTVRELVENSLDSAESIS LPVVE+TIEEI
Sbjct: 26  ETILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVVEITIEEI 85

Query: 87  NRSKFNSMIGLVDRERVDAALYDDYETXXXXXXXXXXXXXXQEIQAKNASLGKKGKEASA 146
            +SKFNSMIGLVDRERVDAALYDDYET              QE+QAKNA+LGKK K+  A
Sbjct: 86  GKSKFNSMIGLVDRERVDAALYDDYETEKAREKRLAKEARAQEMQAKNAALGKKVKDTPA 145

Query: 147 TKGIKGRGEASFYRVTCKDNGKGMPHDDIPDMFGRVLSGTKYGLKQTRGKFGLGAKMALI 206
           +K IKGRGEASFYRVTCKDNGKGMPHDDIP+MFGRVLSGTKYGLKQTRGKFGLGAKMALI
Sbjct: 146 SKAIKGRGEASFYRVTCKDNGKGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALI 205

Query: 207 WSKMSTGLPIEISSSMRKQNYISFCRLDIDIHKNIPHVHLHEKRENNEHWHGAEIQVVIE 266
           WSKMSTGLPIEI+SSM+ QNY+SFCRLDIDIHKNIPHVHLHEKREN EHW GAEIQVVIE
Sbjct: 206 WSKMSTGLPIEITSSMKNQNYVSFCRLDIDIHKNIPHVHLHEKRENKEHWRGAEIQVVIE 265

Query: 267 GNWTTYRSKILHYMRQMAVITPYAQFVFKFMSDAPDKNVTVSFARRTDVMPPIPLETKHH 326
           GNWTTYRSKILHYMRQMAVITPYAQF+FKF+SDAPDKNV++ FARRTDVMPPIP+ETKHH
Sbjct: 266 GNWTTYRSKILHYMRQMAVITPYAQFLFKFVSDAPDKNVSIRFARRTDVMPPIPMETKHH 325

Query: 327 PSSVDLLLIKRLIAETSKQNLVQFLQHEFVNISKPYAERLIG 368
           PSSVDLLLIKRLIAETSKQNL+QFLQHEFVNISK YAERLIG
Sbjct: 326 PSSVDLLLIKRLIAETSKQNLLQFLQHEFVNISKSYAERLIG 367


>Glyma18g05130.1 
          Length = 145

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 73/144 (50%), Gaps = 27/144 (18%)

Query: 163 CKDNGKGMPHDDIPDMFGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSM 222
           CK     +PH+ +  M+   +   K      R  +   A + L    ++ G  IEISS M
Sbjct: 20  CKTITIVLPHNSVI-MYKITILLVK------REHWNGVANIVL----LNIGFFIEISSLM 68

Query: 223 RKQNYISFCRLDIDIHKNIPHVHLHEKRENNEHWHGAEIQVVIEGNWTTYRSKILHYMRQ 282
           + QNY+SFC++DI+IHKNIPHVHLHEKR             ++E  +    + ILHY+ Q
Sbjct: 69  KNQNYVSFCKVDINIHKNIPHVHLHEKRRTR--------NTIVELKFKF--NSILHYISQ 118

Query: 283 MAVITPYAQFVFKFMSDAPDKNVT 306
           M V TP  +       D  +KN T
Sbjct: 119 MIVTTPREEI------DLTNKNQT 136