Miyakogusa Predicted Gene
- Lj4g3v1328820.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1328820.1 tr|I0Z4X8|I0Z4X8_9CHLO Hydroxymethylglutaryl-CoA
synthase OS=Coccomyxa subellipsoidea C-169 PE=4
SV=,42.86,4e-19,SUBFAMILY NOT NAMED,NULL; HYDROXYMETHYLGLUTARYL-COA
SYNTHASE,NULL; Thiolase-like,Thiolase-like; HMG_,CUFF.48933.1
(134 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g14150.1 235 9e-63
Glyma11g02950.1 228 9e-61
Glyma01g42450.1 227 2e-60
Glyma16g32480.1 197 2e-51
Glyma09g27380.1 194 2e-50
Glyma16g32480.2 150 4e-37
Glyma05g03600.1 109 1e-24
>Glyma17g14150.1
Length = 460
Score = 235 bits (600), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 112/134 (83%), Positives = 122/134 (91%)
Query: 1 MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIATVM 60
MYTASLYAAF+SLIHNKHSTL GKRVILFSYGSGLT+TMFSL LR+G+HPFSLSNI +M
Sbjct: 327 MYTASLYAAFISLIHNKHSTLDGKRVILFSYGSGLTSTMFSLLLREGQHPFSLSNIDKMM 386
Query: 61 DVAGKLKSRKEFPPEKFVEIMKLMEHRYGSKEYVTSKETSLLSSGTFYLTEVDNMYRRFY 120
DVAGKLKSR EFPPEKFVE MKLMEHRYG KE+VTSK+TSLLS GTFYLTEVD+MYRRFY
Sbjct: 387 DVAGKLKSRHEFPPEKFVETMKLMEHRYGGKEFVTSKDTSLLSPGTFYLTEVDSMYRRFY 446
Query: 121 EQKTSESALSANGH 134
+KTSE+ L NGH
Sbjct: 447 AKKTSENGLVTNGH 460
>Glyma11g02950.1
Length = 475
Score = 228 bits (582), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 110/130 (84%), Positives = 120/130 (92%)
Query: 1 MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIATVM 60
MYTASLYAAF SLIHNK+STLAGKRVILFSYGSGLTATMFSLQLRD +HPFSLSNIA VM
Sbjct: 327 MYTASLYAAFASLIHNKNSTLAGKRVILFSYGSGLTATMFSLQLRDSQHPFSLSNIARVM 386
Query: 61 DVAGKLKSRKEFPPEKFVEIMKLMEHRYGSKEYVTSKETSLLSSGTFYLTEVDNMYRRFY 120
DV GKLKSR EFPPE+FVE +KLMEHRYG KE+VTSK+TSLLS GTFYLTEVD+MYRRFY
Sbjct: 387 DVDGKLKSRHEFPPEEFVENLKLMEHRYGGKEFVTSKDTSLLSPGTFYLTEVDSMYRRFY 446
Query: 121 EQKTSESALS 130
+KT ES+L+
Sbjct: 447 SKKTKESSLT 456
>Glyma01g42450.1
Length = 471
Score = 227 bits (579), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/145 (77%), Positives = 125/145 (86%), Gaps = 11/145 (7%)
Query: 1 MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIATVM 60
MYTASLYAAF SLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRD +HPFSLSN+A VM
Sbjct: 327 MYTASLYAAFASLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDSQHPFSLSNMARVM 386
Query: 61 DVAGKLKSRKEFPPEKFVEIMKLMEHRYGSKEYVTSKETSLLSSGTFYLTEVDNMYRRFY 120
+V GKLKSR EFPPE+FVE +KLMEHRYG+KE+VTSK++SLLS GTFYLTEVD+MYRRFY
Sbjct: 387 NVDGKLKSRHEFPPEEFVENLKLMEHRYGAKEFVTSKDSSLLSPGTFYLTEVDSMYRRFY 446
Query: 121 EQKTSESALS-----------ANGH 134
+KT ES+L+ ANGH
Sbjct: 447 SKKTKESSLTHAENGVIANGVANGH 471
>Glyma16g32480.1
Length = 454
Score = 197 bits (502), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 89/123 (72%), Positives = 108/123 (87%)
Query: 1 MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIATVM 60
MYTASLYAAF SL+HNK+S+L GKRV++FSYGSGLTATMFS QL++G+HPF+LSNI TVM
Sbjct: 331 MYTASLYAAFASLLHNKNSSLVGKRVVMFSYGSGLTATMFSFQLQEGQHPFNLSNIVTVM 390
Query: 61 DVAGKLKSRKEFPPEKFVEIMKLMEHRYGSKEYVTSKETSLLSSGTFYLTEVDNMYRRFY 120
+V+ KLK R E PPEKFVE +K+MEHRYG K++VTSK+ S L+ GTFYLT VD+MYRRFY
Sbjct: 391 NVSDKLKQRVEIPPEKFVETLKIMEHRYGGKDFVTSKDCSYLTPGTFYLTNVDSMYRRFY 450
Query: 121 EQK 123
+K
Sbjct: 451 AKK 453
>Glyma09g27380.1
Length = 457
Score = 194 bits (494), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 88/123 (71%), Positives = 106/123 (86%)
Query: 1 MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIATVM 60
MYTASLYAAF SL+HNK+S+L GKRV++FSYGSGLTATMFS L++G+HPF+LSNI TVM
Sbjct: 331 MYTASLYAAFASLLHNKNSSLVGKRVVMFSYGSGLTATMFSFHLQEGQHPFNLSNIVTVM 390
Query: 61 DVAGKLKSRKEFPPEKFVEIMKLMEHRYGSKEYVTSKETSLLSSGTFYLTEVDNMYRRFY 120
+V+ KLK R E PPEKFVE +K+MEHRYG K++VTSK+ S L GTFYLT VD+MYRRFY
Sbjct: 391 NVSDKLKQRVEIPPEKFVETLKIMEHRYGGKDFVTSKDCSYLPPGTFYLTNVDSMYRRFY 450
Query: 121 EQK 123
+K
Sbjct: 451 AKK 453
>Glyma16g32480.2
Length = 432
Score = 150 bits (378), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 80/89 (89%)
Query: 1 MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIATVM 60
MYTASLYAAF SL+HNK+S+L GKRV++FSYGSGLTATMFS QL++G+HPF+LSNI TVM
Sbjct: 331 MYTASLYAAFASLLHNKNSSLVGKRVVMFSYGSGLTATMFSFQLQEGQHPFNLSNIVTVM 390
Query: 61 DVAGKLKSRKEFPPEKFVEIMKLMEHRYG 89
+V+ KLK R E PPEKFVE +K+MEHRYG
Sbjct: 391 NVSDKLKQRVEIPPEKFVETLKIMEHRYG 419
>Glyma05g03600.1
Length = 247
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/57 (89%), Positives = 55/57 (96%)
Query: 1 MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIA 57
MYTASLYA F+SLIHNKHSTL GKRVILFSYGSGLT+TMFSLQLR+G+HPFSLSNIA
Sbjct: 190 MYTASLYATFISLIHNKHSTLDGKRVILFSYGSGLTSTMFSLQLREGQHPFSLSNIA 246