Miyakogusa Predicted Gene

Lj4g3v1328820.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1328820.1 tr|I0Z4X8|I0Z4X8_9CHLO Hydroxymethylglutaryl-CoA
synthase OS=Coccomyxa subellipsoidea C-169 PE=4
SV=,42.86,4e-19,SUBFAMILY NOT NAMED,NULL; HYDROXYMETHYLGLUTARYL-COA
SYNTHASE,NULL; Thiolase-like,Thiolase-like; HMG_,CUFF.48933.1
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g14150.1                                                       235   9e-63
Glyma11g02950.1                                                       228   9e-61
Glyma01g42450.1                                                       227   2e-60
Glyma16g32480.1                                                       197   2e-51
Glyma09g27380.1                                                       194   2e-50
Glyma16g32480.2                                                       150   4e-37
Glyma05g03600.1                                                       109   1e-24

>Glyma17g14150.1 
          Length = 460

 Score =  235 bits (600), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 112/134 (83%), Positives = 122/134 (91%)

Query: 1   MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIATVM 60
           MYTASLYAAF+SLIHNKHSTL GKRVILFSYGSGLT+TMFSL LR+G+HPFSLSNI  +M
Sbjct: 327 MYTASLYAAFISLIHNKHSTLDGKRVILFSYGSGLTSTMFSLLLREGQHPFSLSNIDKMM 386

Query: 61  DVAGKLKSRKEFPPEKFVEIMKLMEHRYGSKEYVTSKETSLLSSGTFYLTEVDNMYRRFY 120
           DVAGKLKSR EFPPEKFVE MKLMEHRYG KE+VTSK+TSLLS GTFYLTEVD+MYRRFY
Sbjct: 387 DVAGKLKSRHEFPPEKFVETMKLMEHRYGGKEFVTSKDTSLLSPGTFYLTEVDSMYRRFY 446

Query: 121 EQKTSESALSANGH 134
            +KTSE+ L  NGH
Sbjct: 447 AKKTSENGLVTNGH 460


>Glyma11g02950.1 
          Length = 475

 Score =  228 bits (582), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 110/130 (84%), Positives = 120/130 (92%)

Query: 1   MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIATVM 60
           MYTASLYAAF SLIHNK+STLAGKRVILFSYGSGLTATMFSLQLRD +HPFSLSNIA VM
Sbjct: 327 MYTASLYAAFASLIHNKNSTLAGKRVILFSYGSGLTATMFSLQLRDSQHPFSLSNIARVM 386

Query: 61  DVAGKLKSRKEFPPEKFVEIMKLMEHRYGSKEYVTSKETSLLSSGTFYLTEVDNMYRRFY 120
           DV GKLKSR EFPPE+FVE +KLMEHRYG KE+VTSK+TSLLS GTFYLTEVD+MYRRFY
Sbjct: 387 DVDGKLKSRHEFPPEEFVENLKLMEHRYGGKEFVTSKDTSLLSPGTFYLTEVDSMYRRFY 446

Query: 121 EQKTSESALS 130
            +KT ES+L+
Sbjct: 447 SKKTKESSLT 456


>Glyma01g42450.1 
          Length = 471

 Score =  227 bits (579), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 112/145 (77%), Positives = 125/145 (86%), Gaps = 11/145 (7%)

Query: 1   MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIATVM 60
           MYTASLYAAF SLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRD +HPFSLSN+A VM
Sbjct: 327 MYTASLYAAFASLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDSQHPFSLSNMARVM 386

Query: 61  DVAGKLKSRKEFPPEKFVEIMKLMEHRYGSKEYVTSKETSLLSSGTFYLTEVDNMYRRFY 120
           +V GKLKSR EFPPE+FVE +KLMEHRYG+KE+VTSK++SLLS GTFYLTEVD+MYRRFY
Sbjct: 387 NVDGKLKSRHEFPPEEFVENLKLMEHRYGAKEFVTSKDSSLLSPGTFYLTEVDSMYRRFY 446

Query: 121 EQKTSESALS-----------ANGH 134
            +KT ES+L+           ANGH
Sbjct: 447 SKKTKESSLTHAENGVIANGVANGH 471


>Glyma16g32480.1 
          Length = 454

 Score =  197 bits (502), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 89/123 (72%), Positives = 108/123 (87%)

Query: 1   MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIATVM 60
           MYTASLYAAF SL+HNK+S+L GKRV++FSYGSGLTATMFS QL++G+HPF+LSNI TVM
Sbjct: 331 MYTASLYAAFASLLHNKNSSLVGKRVVMFSYGSGLTATMFSFQLQEGQHPFNLSNIVTVM 390

Query: 61  DVAGKLKSRKEFPPEKFVEIMKLMEHRYGSKEYVTSKETSLLSSGTFYLTEVDNMYRRFY 120
           +V+ KLK R E PPEKFVE +K+MEHRYG K++VTSK+ S L+ GTFYLT VD+MYRRFY
Sbjct: 391 NVSDKLKQRVEIPPEKFVETLKIMEHRYGGKDFVTSKDCSYLTPGTFYLTNVDSMYRRFY 450

Query: 121 EQK 123
            +K
Sbjct: 451 AKK 453


>Glyma09g27380.1 
          Length = 457

 Score =  194 bits (494), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 88/123 (71%), Positives = 106/123 (86%)

Query: 1   MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIATVM 60
           MYTASLYAAF SL+HNK+S+L GKRV++FSYGSGLTATMFS  L++G+HPF+LSNI TVM
Sbjct: 331 MYTASLYAAFASLLHNKNSSLVGKRVVMFSYGSGLTATMFSFHLQEGQHPFNLSNIVTVM 390

Query: 61  DVAGKLKSRKEFPPEKFVEIMKLMEHRYGSKEYVTSKETSLLSSGTFYLTEVDNMYRRFY 120
           +V+ KLK R E PPEKFVE +K+MEHRYG K++VTSK+ S L  GTFYLT VD+MYRRFY
Sbjct: 391 NVSDKLKQRVEIPPEKFVETLKIMEHRYGGKDFVTSKDCSYLPPGTFYLTNVDSMYRRFY 450

Query: 121 EQK 123
            +K
Sbjct: 451 AKK 453


>Glyma16g32480.2 
          Length = 432

 Score =  150 bits (378), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 67/89 (75%), Positives = 80/89 (89%)

Query: 1   MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIATVM 60
           MYTASLYAAF SL+HNK+S+L GKRV++FSYGSGLTATMFS QL++G+HPF+LSNI TVM
Sbjct: 331 MYTASLYAAFASLLHNKNSSLVGKRVVMFSYGSGLTATMFSFQLQEGQHPFNLSNIVTVM 390

Query: 61  DVAGKLKSRKEFPPEKFVEIMKLMEHRYG 89
           +V+ KLK R E PPEKFVE +K+MEHRYG
Sbjct: 391 NVSDKLKQRVEIPPEKFVETLKIMEHRYG 419


>Glyma05g03600.1 
          Length = 247

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 51/57 (89%), Positives = 55/57 (96%)

Query: 1   MYTASLYAAFVSLIHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDGKHPFSLSNIA 57
           MYTASLYA F+SLIHNKHSTL GKRVILFSYGSGLT+TMFSLQLR+G+HPFSLSNIA
Sbjct: 190 MYTASLYATFISLIHNKHSTLDGKRVILFSYGSGLTSTMFSLQLREGQHPFSLSNIA 246