Miyakogusa Predicted Gene

Lj4g3v1327600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1327600.1 tr|C1MZM1|C1MZM1_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_4810,39.47,3e-19,Staygreen,Staygreen protein; FAMILY
NOT NAMED,NULL; seg,NULL,CUFF.48843.1
         (189 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g42390.1                                                       312   2e-85
Glyma11g02980.1                                                       306   6e-84
Glyma17g14210.1                                                       276   9e-75
Glyma04g42260.1                                                       160   5e-40
Glyma06g12550.1                                                       158   3e-39
Glyma05g03700.1                                                       145   2e-35
Glyma06g12550.2                                                       124   6e-29
Glyma04g09420.1                                                        93   1e-19
Glyma01g05630.1                                                        87   1e-17
Glyma16g23470.1                                                        77   1e-14
Glyma17g14200.1                                                        69   4e-12
Glyma16g23550.1                                                        67   1e-11

>Glyma01g42390.1 
          Length = 271

 Score =  312 bits (799), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 160/171 (93%)

Query: 19  SLSPHRTRRIRKKNQAVFPVARLFGPAMFEASKLKVLFLGVDENKHPGDLPRTYTLTHSD 78
           SL P+  RR+ KKN+A+ PVARLFGPA+FEASKLKVLFLGVDENKHPG+LPRTYTLTHSD
Sbjct: 25  SLFPYYGRRVGKKNKAMVPVARLFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSD 84

Query: 79  ITSKITLAISHNINNSQLQGWYNRLQRDEVVAQWRKIKGNMSLHVHCHISGGHFLLDLCA 138
           IT+K+TLAIS  INNSQLQGWYNRLQRDEVVAQW+K+KG MSLHVHCHISGGHFLLD+ A
Sbjct: 85  ITAKLTLAISQTINNSQLQGWYNRLQRDEVVAQWKKVKGKMSLHVHCHISGGHFLLDILA 144

Query: 139 KLRYFIFCKELPVVLKAFIHGDENLFNNYPELEESLVWVYFHSNISEFNKV 189
           +LRYFIFCKELPVVLKA +HGDENLFNNYPEL+++LVWVYFHSNI EFNKV
Sbjct: 145 RLRYFIFCKELPVVLKAVVHGDENLFNNYPELQDALVWVYFHSNIPEFNKV 195


>Glyma11g02980.1 
          Length = 261

 Score =  306 bits (785), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 142/171 (83%), Positives = 159/171 (92%)

Query: 19  SLSPHRTRRIRKKNQAVFPVARLFGPAMFEASKLKVLFLGVDENKHPGDLPRTYTLTHSD 78
           SL P+  RR+ KKN+A+ PVARLFGPA+FEASKLKVLFLGVDENKHPG+LPRTYTLTHSD
Sbjct: 25  SLFPYCGRRVGKKNKAMVPVARLFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSD 84

Query: 79  ITSKITLAISHNINNSQLQGWYNRLQRDEVVAQWRKIKGNMSLHVHCHISGGHFLLDLCA 138
           IT+K+TLAIS  INNSQLQGWYNR QRDEVVAQW+K+KG MSLHVHCHISGGHFLLD+ A
Sbjct: 85  ITAKLTLAISQTINNSQLQGWYNRFQRDEVVAQWKKVKGRMSLHVHCHISGGHFLLDILA 144

Query: 139 KLRYFIFCKELPVVLKAFIHGDENLFNNYPELEESLVWVYFHSNISEFNKV 189
           +LRYFIFCKELPVVLKA +HGDENLFN+YPEL+++LVWVYFHSNI EFNKV
Sbjct: 145 RLRYFIFCKELPVVLKAVVHGDENLFNSYPELQDALVWVYFHSNIPEFNKV 195


>Glyma17g14210.1 
          Length = 235

 Score =  276 bits (706), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 128/154 (83%), Positives = 141/154 (91%)

Query: 36  FPVARLFGPAMFEASKLKVLFLGVDENKHPGDLPRTYTLTHSDITSKITLAISHNINNSQ 95
           + VARLFGPA+FEASKLKVLFLGVD+ KHP  LPRTYTLTH DITSKITL+IS  INNSQ
Sbjct: 43  YQVARLFGPAIFEASKLKVLFLGVDQKKHPSYLPRTYTLTHCDITSKITLSISQTINNSQ 102

Query: 96  LQGWYNRLQRDEVVAQWRKIKGNMSLHVHCHISGGHFLLDLCAKLRYFIFCKELPVVLKA 155
           LQGWYN+LQRDEVVA WRKIKG MSLHVH H+SGGHFLLD+CA +RYFIFCKELPVVL A
Sbjct: 103 LQGWYNKLQRDEVVAHWRKIKGKMSLHVHLHVSGGHFLLDICAGIRYFIFCKELPVVLNA 162

Query: 156 FIHGDENLFNNYPELEESLVWVYFHSNISEFNKV 189
           FIHGD+NLF +YPEL+E+LVWVYFHSNIS+FNKV
Sbjct: 163 FIHGDKNLFKDYPELQEALVWVYFHSNISKFNKV 196


>Glyma04g42260.1 
          Length = 254

 Score =  160 bits (406), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 82/159 (51%), Positives = 110/159 (69%), Gaps = 4/159 (2%)

Query: 32  NQAVFPVARLFGP-AMFEASKLKVLFLGVDENKHPGDLPRTYTLTHSDITSKITLAISHN 90
           N  V    RL  P A FEASKLKV+ L    NKH   +PRTY L+H D T+ +TLA+S+ 
Sbjct: 54  NTLVSEAVRLLVPSARFEASKLKVVLLEDQINKHASIIPRTYILSHCDFTANLTLAVSNV 113

Query: 91  INNSQLQGWYNRLQRDEVVAQWRKIKGNMSLHVHCHISGGHFLLDLCAKLRYFIFCKELP 150
           IN  QL+GWY   ++D+VVA+W+K++ +M LHVHC +SG +  LDL A+LRY IF KE+P
Sbjct: 114 INLEQLRGWY---EKDDVVAEWKKVQNDMCLHVHCFVSGPNSFLDLAAELRYHIFSKEMP 170

Query: 151 VVLKAFIHGDENLFNNYPELEESLVWVYFHSNISEFNKV 189
           +VLKA   GD  LF  +PEL +S+V VYFHS   ++N++
Sbjct: 171 LVLKAIHCGDSALFREHPELLDSIVRVYFHSCSEKYNRM 209


>Glyma06g12550.1 
          Length = 251

 Score =  158 bits (400), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 81/159 (50%), Positives = 109/159 (68%), Gaps = 4/159 (2%)

Query: 32  NQAVFPVARLFGP-AMFEASKLKVLFLGVDENKHPGDLPRTYTLTHSDITSKITLAISHN 90
           N  V    RL  P A FE SKLKV+ L    NKH    PRTY L+H D T+ +TLA+S+ 
Sbjct: 51  NTLVSEAVRLLVPSARFEPSKLKVVLLEDQINKHASFTPRTYILSHCDFTANLTLAVSNV 110

Query: 91  INNSQLQGWYNRLQRDEVVAQWRKIKGNMSLHVHCHISGGHFLLDLCAKLRYFIFCKELP 150
           IN  QL+GWY   ++D+VVA+W+K++ +M LHVHC +SG +  LDL A+LRY IF KE+P
Sbjct: 111 INLEQLRGWY---EKDDVVAEWKKVQNDMCLHVHCFVSGPNSFLDLAAELRYHIFSKEMP 167

Query: 151 VVLKAFIHGDENLFNNYPELEESLVWVYFHSNISEFNKV 189
           +VLKA   GD  LF  +PEL +S+V VYFHS+  ++N++
Sbjct: 168 LVLKAIHCGDSALFREHPELLDSIVRVYFHSSSEKYNRM 206


>Glyma05g03700.1 
          Length = 110

 Score =  145 bits (367), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/148 (52%), Positives = 93/148 (62%), Gaps = 38/148 (25%)

Query: 41  LFGPAMFEASKLKVLFLGVDENKHPGDLPRTYTLTHSDITSKITLAISHNINNSQLQGWY 100
           +F   +F+ASKLKVLFLGVD+ KHP  LPRTYTLTH DITSKITL+IS  IN +QLQGWY
Sbjct: 1   IFLVVIFDASKLKVLFLGVDQKKHPSYLPRTYTLTHCDITSKITLSISQTINKTQLQGWY 60

Query: 101 NRLQRDEVVAQWRKIKGNMSLHVHCHISGGHFLLDLCAKLRYFIFCKELPVVLKAFIHGD 160
           N+LQRDEVVA WRKI G +S                          ++ P          
Sbjct: 61  NKLQRDEVVAHWRKINGKIS-------------------------NRKWP---------- 85

Query: 161 ENLFNNYPELEESLVWVYFHSNISEFNK 188
              F++YPEL E+LVWVYFH+N S+FNK
Sbjct: 86  ---FSDYPELHEALVWVYFHANNSKFNK 110


>Glyma06g12550.2 
          Length = 183

 Score =  124 bits (311), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 4/122 (3%)

Query: 32  NQAVFPVARLFGP-AMFEASKLKVLFLGVDENKHPGDLPRTYTLTHSDITSKITLAISHN 90
           N  V    RL  P A FE SKLKV+ L    NKH    PRTY L+H D T+ +TLA+S+ 
Sbjct: 51  NTLVSEAVRLLVPSARFEPSKLKVVLLEDQINKHASFTPRTYILSHCDFTANLTLAVSNV 110

Query: 91  INNSQLQGWYNRLQRDEVVAQWRKIKGNMSLHVHCHISGGHFLLDLCAKLRYFIFCKELP 150
           IN  QL+GWY   ++D+VVA+W+K++ +M LHVHC +SG +  LDL A+LRY IF KE+P
Sbjct: 111 INLEQLRGWY---EKDDVVAEWKKVQNDMCLHVHCFVSGPNSFLDLAAELRYHIFSKEMP 167

Query: 151 VV 152
           +V
Sbjct: 168 LV 169


>Glyma04g09420.1 
          Length = 92

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 6/98 (6%)

Query: 54  VLFLGVDENKHPGDLPRTYTLTHSDITSKITLAISHNINNSQLQGWYNRLQRDEVVAQWR 113
           V+ L    NKH   +PRTY L+H D TS +TL +S   N  ++ GWY   ++D+VVA+W+
Sbjct: 1   VVLLEDQINKHESIIPRTYILSHCDFTSNLTLVVS---NFMRIIGWY---EKDDVVAEWK 54

Query: 114 KIKGNMSLHVHCHISGGHFLLDLCAKLRYFIFCKELPV 151
           K++ +M L+VHC +SG +  LDL  +LRY IF KE+P+
Sbjct: 55  KVQNDMCLYVHCFVSGPNSFLDLAGELRYCIFSKEMPL 92


>Glyma01g05630.1 
          Length = 89

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 9/98 (9%)

Query: 54  VLFLGVDENKHPGDLPRTYTLTHSDITSKITLAISHNINNSQLQGWYNRLQRDEVVAQWR 113
           V+ L    NKH   +PRTY L H D TS +TL +S+      L+GW    ++D+VVA+W+
Sbjct: 1   VVLLEDQINKHASIIPRTYILFHCDFTSNLTLVVSN------LRGWN---EKDDVVAKWK 51

Query: 114 KIKGNMSLHVHCHISGGHFLLDLCAKLRYFIFCKELPV 151
           K++ +M LH HC +S  +  LDL ++LRY IF KE+P+
Sbjct: 52  KVQNDMCLHAHCFVSDPNSFLDLASELRYHIFSKEMPL 89


>Glyma16g23470.1 
          Length = 109

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/58 (58%), Positives = 43/58 (74%)

Query: 47  FEASKLKVLFLGVDENKHPGDLPRTYTLTHSDITSKITLAISHNINNSQLQGWYNRLQ 104
             ++ + +   GVDENKH G+LPRTYTLTH+DIT+K+TLAIS  INNSQ+  W N L 
Sbjct: 42  LSSTSIAMATCGVDENKHLGNLPRTYTLTHTDITAKLTLAISQTINNSQMGPWLNSLN 99


>Glyma17g14200.1 
          Length = 120

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 34/38 (89%)

Query: 152 VLKAFIHGDENLFNNYPELEESLVWVYFHSNISEFNKV 189
           VL AF HGD+NLF +YPEL ++LVWVYFHSNISEFNKV
Sbjct: 38  VLNAFSHGDKNLFKDYPELHDALVWVYFHSNISEFNKV 75



 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 34/38 (89%)

Query: 59 VDENKHPGDLPRTYTLTHSDITSKITLAISHNINNSQL 96
          +D+ KHP DLPRTYTLTHSDITSKITL+IS  INNSQ+
Sbjct: 1  MDQKKHPADLPRTYTLTHSDITSKITLSISQTINNSQV 38


>Glyma16g23550.1 
          Length = 70

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 35/38 (92%)

Query: 58 GVDENKHPGDLPRTYTLTHSDITSKITLAISHNINNSQ 95
          GVDEN+H G+LPRTYTLTH+DIT+K+TLAIS  INNSQ
Sbjct: 33 GVDENQHLGNLPRTYTLTHTDITAKLTLAISQTINNSQ 70