Miyakogusa Predicted Gene

Lj4g3v1327520.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1327520.1 Non Chatacterized Hit- tr|B4FD00|B4FD00_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,39.82,7e-17,seg,NULL,CUFF.48832.1
         (243 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g14250.1                                                       342   3e-94
Glyma05g03740.1                                                        99   3e-21
Glyma10g28860.1                                                        72   7e-13
Glyma20g23050.1                                                        69   6e-12

>Glyma17g14250.1 
          Length = 238

 Score =  342 bits (876), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 179/245 (73%), Positives = 195/245 (79%), Gaps = 9/245 (3%)

Query: 1   MASNGEVIGKEEVIAKLKDDGDFDXXXXXXXXXXXDNEELRQHITSIVKQSVALNRDGAE 60
           M S+ EV+GKEEVIAKLKDDGDFD           DNEELRQHITSIVKQSVALNR GAE
Sbjct: 1   MGSSEEVVGKEEVIAKLKDDGDFDRLRLKIVRKLKDNEELRQHITSIVKQSVALNRAGAE 60

Query: 61  NMKPRQLSDSIYEEVGEKVMSQISDSLWQIIRSNDGMKGEIAETVQSVYDKLANPKGKDE 120
           NMKPRQLSD+I+EEVG+KVMSQISDSLWQIIRS D MK EI ETVQSVYDKLANPKGKDE
Sbjct: 61  NMKPRQLSDAIHEEVGDKVMSQISDSLWQIIRSGDDMKSEIMETVQSVYDKLANPKGKDE 120

Query: 121 VLLSTSDGVPVQRQGESASATEVDDTLHENEPEEPPGFTXXXXXXXXXXXEKQDKGHEEQ 180
           V++S SD +P+ RQGE+ASATE+DDTLHENEP+EPPGFT              +  HEEQ
Sbjct: 121 VMMSMSDVMPIHRQGETASATEIDDTLHENEPDEPPGFTLLHNHL-------NNNYHEEQ 173

Query: 181 DKGKAQVQRQGSPAEQKEDSQPSQDTHGGDD-NSNA-PPGFSRDMEHNQPSDCSDEDPDL 238
           DKGK QVQ+QG  AEQKEDS PSQDT G DD NSNA PPGFS D+E    SDCSDEDPD+
Sbjct: 174 DKGKVQVQKQGFTAEQKEDSHPSQDTLGEDDVNSNAPPPGFSMDVEQKPSSDCSDEDPDV 233

Query: 239 PPGFG 243
           PPGFG
Sbjct: 234 PPGFG 238


>Glyma05g03740.1 
          Length = 57

 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/55 (87%), Positives = 51/55 (92%)

Query: 38 EELRQHITSIVKQSVALNRDGAENMKPRQLSDSIYEEVGEKVMSQISDSLWQIIR 92
          EEL QHI S VKQSVALNR GAENMKPRQLSD+I+EEVG+KVMSQISDSLWQIIR
Sbjct: 1  EELGQHIASFVKQSVALNRAGAENMKPRQLSDAIHEEVGDKVMSQISDSLWQIIR 55


>Glyma10g28860.1 
          Length = 193

 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 1/113 (0%)

Query: 1   MASNGEVIGKEEVIAKLKDDGDFDXXXXXXXXXXXDNEELRQHITSIVKQSVALNRDGAE 60
           MAS+  +I  E+V+  L +DG  D            NEEL+     + +QS  LN  GAE
Sbjct: 1   MASSS-IITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAE 59

Query: 61  NMKPRQLSDSIYEEVGEKVMSQISDSLWQIIRSNDGMKGEIAETVQSVYDKLA 113
               R+L D++ +E+   V+ + S S+W +I  N+G+  EI+ETV+ V+ +L+
Sbjct: 60  KQTKRELFDALRQELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLS 112


>Glyma20g23050.1 
          Length = 195

 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 1   MASNGEVIGKEEVIAKLKDDGDFDXXXXXXXXXXXDNEELRQHITSIVKQSVALNRDGAE 60
           MAS+  +I  E+V+  L +DG  D            NEEL+     + +QS  LN  GAE
Sbjct: 1   MASSS-IITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAE 59

Query: 61  NMKPRQLSDSIYEEVGEKVMSQISDSLWQIIRSNDGMKGEIAETVQSVYDKLA 113
               R+L D++ +E+   V+ + S S+W +I  N+G+  EI+E V+ V+ +L+
Sbjct: 60  KQTKRELFDALRQELEASVLEKASKSVWDLILDNNGLGKEISEMVERVFCRLS 112