Miyakogusa Predicted Gene

Lj4g3v1314910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1314910.1 Non Chatacterized Hit- tr|I1I3E2|I1I3E2_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,36.55,0.00000000003,seg,NULL,gene.g54489.t1.1
         (291 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g03890.1                                                       151   9e-37
Glyma17g14360.1                                                       141   9e-34
Glyma05g03840.1                                                        89   7e-18
Glyma12g28950.1                                                        58   1e-08

>Glyma05g03890.1 
          Length = 407

 Score =  151 bits (381), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/218 (45%), Positives = 112/218 (51%), Gaps = 49/218 (22%)

Query: 2   LISNLVETLSREDLASRLSLTTDDGSVGPLLLSDSCITIMD------------------- 42
            + + VETLSREDLASRLSLTTD  SVGPLLLSDS ITIMD                   
Sbjct: 179 FVVSQVETLSREDLASRLSLTTDAASVGPLLLSDSFITIMDTNDYCAIPQQLKDQLGERY 238

Query: 43  ----------------------------LHLRRVGVEPRPDLVHGIPKGDLGGSPSNENX 74
                                       LHLRRVGVE RPDLVH +PKGD+GGS S EN 
Sbjct: 239 PEARRAYLKTGGDFPFLSRPDEVNLHLQLHLRRVGVEARPDLVHNVPKGDIGGSHSKENN 298

Query: 75  XXXXXXXXXXXXXXXXENPSAESEIQPA-PESSGSHSLDNQPLESSEYHQLGHEITLYIF 133
                           ENP A+ EI P  PESSGS +LD QPL+SS+   L HE+TLY F
Sbjct: 299 QDDSDKSHKDDRGGS-ENPPAKYEINPTCPESSGSGNLDKQPLDSSKRCHLDHELTLYAF 357

Query: 134 PGELMKEKHIVPPKTPDDFQCDCSSPWAICDHPRLHYI 171
           PG   +EK IVPP TP  F  +    + +  H    YI
Sbjct: 358 PGGFTREKRIVPPGTPLHFVWEYIVLFCLLRHVSCLYI 395


>Glyma17g14360.1 
          Length = 398

 Score =  141 bits (355), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 95/199 (47%), Positives = 104/199 (52%), Gaps = 57/199 (28%)

Query: 2   LISNLVETLSREDLASRLSLTTDDGSVGPLLLSDSCITIMD------------------- 42
            + + VETLSREDLASRLSLTTD  SVGPLLLS S ITIMD                   
Sbjct: 179 FVVSQVETLSREDLASRLSLTTDAASVGPLLLSVSFITIMDTNDYCAIPQQLKDQLGERY 238

Query: 43  ----------------------------LHLRRVGVEPRPDLVHGIPKGDLGGSPSNENX 74
                                       LHLRRVGVEPRPDLVH IPKGD+GGSPS EN 
Sbjct: 239 PEARRAYLKTGGDFPFLSRPDEVNLHLQLHLRRVGVEPRPDLVHNIPKGDIGGSPSKEN- 297

Query: 75  XXXXXXXXXXXXXXXXENPSAESEIQP-APESSGSHSLDNQPLESSEYHQLGHEITLYIF 133
                           ENP AE EI P +PESSGS +LD QPL+SSE          ++F
Sbjct: 298 NEDDSDESHKDNGGGSENPPAEYEINPTSPESSGSGNLDKQPLDSSE--------CCHLF 349

Query: 134 PGELMKEKHIVPPKTPDDF 152
           PG   +EKHIVPP TP  F
Sbjct: 350 PGGFPREKHIVPPGTPLHF 368


>Glyma05g03840.1 
          Length = 161

 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 73/160 (45%), Gaps = 59/160 (36%)

Query: 7   VETLSREDLASRLSLTTDDGSVGPLLLSDSCITIMD------------------------ 42
           VETLSR+DLASRLSLTTD  SV PLLLSDS ITIMD                        
Sbjct: 2   VETLSRDDLASRLSLTTDAASVEPLLLSDSFITIMDTNDYCAIPQQLRDQLGERYPEARR 61

Query: 43  -----------------------------LHL----RRVGVEPRPDLVHGIPKGDLGGSP 69
                                        LHL    RRV VE RPDLVH +PKGD+GGSP
Sbjct: 62  AYLKTGGDFPFLSKTGGDFPFLSRPDEDNLHLQLHLRRVDVEARPDLVHNVPKGDIGGSP 121

Query: 70  SNENXXXXXXXXXXXXXXXXXENPSAESEIQP-APESSGS 108
             EN                 ENP A+ EI P +PESSGS
Sbjct: 122 GKEN-NRDGSDKSHKDDKGGSENPPAKYEINPTSPESSGS 160


>Glyma12g28950.1 
          Length = 629

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 2/87 (2%)

Query: 166 PRLHYIDCKVST-NAVDIDKWSYFECLDNVAELGYTKGKFKLFWMTHEDFVAHNFRPLLI 224
           P LHY D K  T + ++ID WS+FE +  +  L Y  GK K +W   +     N +P + 
Sbjct: 22  PSLHYADVKKDTFHGLNIDTWSFFEGVGLLKGLVYD-GKMKFWWKAEDAQFEGNLKPFMN 80

Query: 225 DDEAMVMATYATNNKGEVHLFVQHDAS 251
           D++A+ +  +A  NK +V ++V+H  S
Sbjct: 81  DNDALKLPKFALLNKCKVGIYVEHTVS 107