Miyakogusa Predicted Gene

Lj4g3v1313800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1313800.1 Non Chatacterized Hit- tr|I1K0H7|I1K0H7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26389
PE,60.19,6e-19,seg,NULL,CUFF.48793.1
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g03930.1                                                        81   2e-16
Glyma17g14410.1                                                        72   1e-13

>Glyma05g03930.1 
          Length = 223

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/108 (52%), Positives = 64/108 (59%), Gaps = 16/108 (14%)

Query: 4   MASATSRMVLNEMLHLSF-TLPFSSLRVGSVLSRALPFSPYRNTSLLQSRHSRFPAIRCA 62
           M++ T+RM++ EML LS  TL FSS      LS  LPFS       +Q R SR PAIRCA
Sbjct: 1   MSTGTTRMLVKEMLQLSSSTLHFSS--AFRALSPPLPFS-------IQLRRSRRPAIRCA 51

Query: 63  XXXXXXXXXXXXRLSQVQHLLHEAEQRALSADTGPIPKITLG---VSF 107
                       RLSQVQHLL +AE RALSAD GP PKITL    VSF
Sbjct: 52  SSDSDKVSS---RLSQVQHLLQQAEHRALSADQGPPPKITLDHVTVSF 96


>Glyma17g14410.1 
          Length = 230

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/110 (50%), Positives = 61/110 (55%), Gaps = 13/110 (11%)

Query: 4   MASATSRMVLNEMLHLSFTLPFSSLRVGSVLSRALPFSPYRNTSLLQSRHSRF-PAIRCA 62
           MAS T+RM++ EML LS +    S      LS  LPFS       +Q R SR  PAIRCA
Sbjct: 1   MASGTTRMLVKEMLQLSSSTLHFSSSALRGLSPPLPFS-------IQLRRSRGRPAIRCA 53

Query: 63  XXXXXXX--XXXXXRLSQVQHLLHEAEQRALSADTGPIPKITLG---VSF 107
                         RLSQVQHLL +AE RALSAD GP PKITL    VSF
Sbjct: 54  SSSSDSDASNKVSSRLSQVQHLLQQAEHRALSADQGPPPKITLDHVTVSF 103