Miyakogusa Predicted Gene
- Lj4g3v1287250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1287250.1 tr|Q00X22|Q00X22_OSTTA Senescence-inducible
chloroplast stay-green protein (ISS) OS=Ostreococcus
tau,33.33,2e-18,seg,NULL; FAMILY NOT NAMED,NULL; Staygreen,Staygreen
protein,NODE_47131_length_1379_cov_64.810730.path2.1
(265 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g42390.1 389 e-108
Glyma11g02980.1 385 e-107
Glyma17g14210.1 291 4e-79
Glyma04g42260.1 180 1e-45
Glyma06g12550.1 177 1e-44
Glyma05g03700.1 144 9e-35
Glyma06g12550.2 124 2e-28
Glyma17g14200.1 100 1e-21
Glyma04g09420.1 93 3e-19
Glyma01g05630.1 86 3e-17
Glyma16g23470.1 83 3e-16
Glyma16g23550.1 76 3e-14
>Glyma01g42390.1
Length = 271
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/272 (72%), Positives = 213/272 (78%), Gaps = 8/272 (2%)
Query: 1 MGTLTTAPVLTSKFKPSSLSPQEKLSFFPHR-RRFGKKNQAIVPVARLFGPAIFEASKLK 59
MGTLTT PVL SK SLSP+ S FP+ RR GKKN+A+VPVARLFGPAIFEASKLK
Sbjct: 1 MGTLTTVPVLPSKLNKPSLSPRHN-SLFPYYGRRVGKKNKAMVPVARLFGPAIFEASKLK 59
Query: 60 VLFLGVDENKHPGNLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNKLQRDEVVAQWK 119
VLFLGVDENKHPGNLPRTYTLTHSDIT+KLTLAISQTINNSQLQGWYN+LQRDEVVAQWK
Sbjct: 60 VLFLGVDENKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQGWYNRLQRDEVVAQWK 119
Query: 120 KMKGKMSLHVHCHISGGHFLLDIFARLRYFIFCKELPVVLKAFVHGDGNLLNNYPELQDA 179
K+KGKMSLHVHCHISGGHFLLDI ARLRYFIFCKELPVVLKA VHGD NL NNYPELQDA
Sbjct: 120 KVKGKMSLHVHCHISGGHFLLDILARLRYFIFCKELPVVLKAVVHGDENLFNNYPELQDA 179
Query: 180 LVWVYFHSKIPEFNKVQCWGPLKEAAAXXXXXXXXXXXXVKMPDXXXXXXXXXXXXXXA- 238
LVWVYFHS IPEFNKV+CWGPLKEA+A +
Sbjct: 180 LVWVYFHSNIPEFNKVECWGPLKEASAPIGGAKEESEQETLLSKEGLAIPQPCQEECECC 239
Query: 239 -----LNPIQWSEEVPSPNYEAFDGVGTQQNL 265
L+PIQWS++VPS +YE DG+ TQQ+L
Sbjct: 240 FPPLTLSPIQWSQQVPSHHYEPCDGIETQQSL 271
>Glyma11g02980.1
Length = 261
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/266 (73%), Positives = 213/266 (80%), Gaps = 6/266 (2%)
Query: 1 MGTLTTAPVLTSKFKPSSLSPQEKLSFFPH-RRRFGKKNQAIVPVARLFGPAIFEASKLK 59
M TLTT PVL SK SLSP S FP+ RR GKKN+A+VPVARLFGPAIFEASKLK
Sbjct: 1 MCTLTTVPVLPSKLNKPSLSPHHN-SLFPYCGRRVGKKNKAMVPVARLFGPAIFEASKLK 59
Query: 60 VLFLGVDENKHPGNLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNKLQRDEVVAQWK 119
VLFLGVDENKHPGNLPRTYTLTHSDIT+KLTLAISQTINNSQLQGWYN+ QRDEVVAQWK
Sbjct: 60 VLFLGVDENKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQGWYNRFQRDEVVAQWK 119
Query: 120 KMKGKMSLHVHCHISGGHFLLDIFARLRYFIFCKELPVVLKAFVHGDGNLLNNYPELQDA 179
K+KG+MSLHVHCHISGGHFLLDI ARLRYFIFCKELPVVLKA VHGD NL N+YPELQDA
Sbjct: 120 KVKGRMSLHVHCHISGGHFLLDILARLRYFIFCKELPVVLKAVVHGDENLFNSYPELQDA 179
Query: 180 LVWVYFHSKIPEFNKVQCWGPLKEAAAXXXXXXXXXXXXVKMPDXXXXXXXXXXXXXXAL 239
LVWVYFHS IPEFNKV+CWGPLKEA+A + +P L
Sbjct: 180 LVWVYFHSNIPEFNKVECWGPLKEASAPTGGVQEEG---LAIPQPCQEECQCCFPPL-TL 235
Query: 240 NPIQWSEEVPSPNYEAFDGVGTQQNL 265
+PIQWS++VPS +YE DG+GTQQNL
Sbjct: 236 SPIQWSKQVPSRHYEPCDGIGTQQNL 261
>Glyma17g14210.1
Length = 235
Score = 291 bits (745), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 134/163 (82%), Positives = 147/163 (90%)
Query: 44 VARLFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITSKLTLAISQTINNSQLQ 103
VARLFGPAIFEASKLKVLFLGVD+ KHP LPRTYTLTH DITSK+TL+ISQTINNSQLQ
Sbjct: 45 VARLFGPAIFEASKLKVLFLGVDQKKHPSYLPRTYTLTHCDITSKITLSISQTINNSQLQ 104
Query: 104 GWYNKLQRDEVVAQWKKMKGKMSLHVHCHISGGHFLLDIFARLRYFIFCKELPVVLKAFV 163
GWYNKLQRDEVVA W+K+KGKMSLHVH H+SGGHFLLDI A +RYFIFCKELPVVL AF+
Sbjct: 105 GWYNKLQRDEVVAHWRKIKGKMSLHVHLHVSGGHFLLDICAGIRYFIFCKELPVVLNAFI 164
Query: 164 HGDGNLLNNYPELQDALVWVYFHSKIPEFNKVQCWGPLKEAAA 206
HGD NL +YPELQ+ALVWVYFHS I +FNKV+CWGPLK+ A
Sbjct: 165 HGDKNLFKDYPELQEALVWVYFHSNISKFNKVECWGPLKDVCA 207
>Glyma04g42260.1
Length = 254
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 114/168 (67%), Gaps = 4/168 (2%)
Query: 38 NQAIVPVARLFGP-AIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITSKLTLAISQT 96
N + RL P A FEASKLKV+ L NKH +PRTY L+H D T+ LTLA+S
Sbjct: 54 NTLVSEAVRLLVPSARFEASKLKVVLLEDQINKHASIIPRTYILSHCDFTANLTLAVSNV 113
Query: 97 INNSQLQGWYNKLQRDEVVAQWKKMKGKMSLHVHCHISGGHFLLDIFARLRYFIFCKELP 156
IN QL+GWY K D+VVA+WKK++ M LHVHC +SG + LD+ A LRY IF KE+P
Sbjct: 114 INLEQLRGWYEK---DDVVAEWKKVQNDMCLHVHCFVSGPNSFLDLAAELRYHIFSKEMP 170
Query: 157 VVLKAFVHGDGNLLNNYPELQDALVWVYFHSKIPEFNKVQCWGPLKEA 204
+VLKA GD L +PEL D++V VYFHS ++N+++CWGPLK+A
Sbjct: 171 LVLKAIHCGDSALFREHPELLDSIVRVYFHSCSEKYNRMECWGPLKDA 218
>Glyma06g12550.1
Length = 251
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 112/168 (66%), Gaps = 4/168 (2%)
Query: 38 NQAIVPVARLFGP-AIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITSKLTLAISQT 96
N + RL P A FE SKLKV+ L NKH PRTY L+H D T+ LTLA+S
Sbjct: 51 NTLVSEAVRLLVPSARFEPSKLKVVLLEDQINKHASFTPRTYILSHCDFTANLTLAVSNV 110
Query: 97 INNSQLQGWYNKLQRDEVVAQWKKMKGKMSLHVHCHISGGHFLLDIFARLRYFIFCKELP 156
IN QL+GWY K D+VVA+WKK++ M LHVHC +SG + LD+ A LRY IF KE+P
Sbjct: 111 INLEQLRGWYEK---DDVVAEWKKVQNDMCLHVHCFVSGPNSFLDLAAELRYHIFSKEMP 167
Query: 157 VVLKAFVHGDGNLLNNYPELQDALVWVYFHSKIPEFNKVQCWGPLKEA 204
+VLKA GD L +PEL D++V VYFHS ++N+++CWGPLK+A
Sbjct: 168 LVLKAIHCGDSALFREHPELLDSIVRVYFHSSSEKYNRMECWGPLKDA 215
>Glyma05g03700.1
Length = 110
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 93/148 (62%), Gaps = 38/148 (25%)
Query: 47 LFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITSKLTLAISQTINNSQLQGWY 106
+F IF+ASKLKVLFLGVD+ KHP LPRTYTLTH DITSK+TL+ISQTIN +QLQGWY
Sbjct: 1 IFLVVIFDASKLKVLFLGVDQKKHPSYLPRTYTLTHCDITSKITLSISQTINKTQLQGWY 60
Query: 107 NKLQRDEVVAQWKKMKGKMSLHVHCHISGGHFLLDIFARLRYFIFCKELPVVLKAFVHGD 166
NKLQRDEVVA W+K+ GK+S ++ P
Sbjct: 61 NKLQRDEVVAHWRKINGKIS-------------------------NRKWP---------- 85
Query: 167 GNLLNNYPELQDALVWVYFHSKIPEFNK 194
++YPEL +ALVWVYFH+ +FNK
Sbjct: 86 ---FSDYPELHEALVWVYFHANNSKFNK 110
>Glyma06g12550.2
Length = 183
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 79/122 (64%), Gaps = 4/122 (3%)
Query: 38 NQAIVPVARLFGP-AIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITSKLTLAISQT 96
N + RL P A FE SKLKV+ L NKH PRTY L+H D T+ LTLA+S
Sbjct: 51 NTLVSEAVRLLVPSARFEPSKLKVVLLEDQINKHASFTPRTYILSHCDFTANLTLAVSNV 110
Query: 97 INNSQLQGWYNKLQRDEVVAQWKKMKGKMSLHVHCHISGGHFLLDIFARLRYFIFCKELP 156
IN QL+GWY K D+VVA+WKK++ M LHVHC +SG + LD+ A LRY IF KE+P
Sbjct: 111 INLEQLRGWYEK---DDVVAEWKKVQNDMCLHVHCFVSGPNSFLDLAAELRYHIFSKEMP 167
Query: 157 VV 158
+V
Sbjct: 168 LV 169
>Glyma17g14200.1
Length = 120
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 73/142 (51%), Gaps = 56/142 (39%)
Query: 65 VDENKHPGNLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNKLQRDEVVAQWKKMKGK 124
+D+ KHP +LPRTYTLTHSDITSK+TL+ISQTINNSQ
Sbjct: 1 MDQKKHPADLPRTYTLTHSDITSKITLSISQTINNSQ----------------------- 37
Query: 125 MSLHVHCHISGGHFLLDIFARLRYFIFCKELPVVLKAFVHGDGNLLNNYPELQDALVWVY 184
+L+ F+ +F K+ P EL DALVWVY
Sbjct: 38 --------------VLNAFSHGDKNLF-KDYP------------------ELHDALVWVY 64
Query: 185 FHSKIPEFNKVQCWGPLKEAAA 206
FHS I EFNKV+CWGPLK+A A
Sbjct: 65 FHSNISEFNKVECWGPLKDACA 86
>Glyma04g09420.1
Length = 92
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 64/98 (65%), Gaps = 6/98 (6%)
Query: 60 VLFLGVDENKHPGNLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNKLQRDEVVAQWK 119
V+ L NKH +PRTY L+H D TS LTL +S N ++ GWY ++D+VVA+WK
Sbjct: 1 VVLLEDQINKHESIIPRTYILSHCDFTSNLTLVVS---NFMRIIGWY---EKDDVVAEWK 54
Query: 120 KMKGKMSLHVHCHISGGHFLLDIFARLRYFIFCKELPV 157
K++ M L+VHC +SG + LD+ LRY IF KE+P+
Sbjct: 55 KVQNDMCLYVHCFVSGPNSFLDLAGELRYCIFSKEMPL 92
>Glyma01g05630.1
Length = 89
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 9/98 (9%)
Query: 60 VLFLGVDENKHPGNLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNKLQRDEVVAQWK 119
V+ L NKH +PRTY L H D TS LTL +S L+GW ++D+VVA+WK
Sbjct: 1 VVLLEDQINKHASIIPRTYILFHCDFTSNLTLVVSN------LRGWN---EKDDVVAKWK 51
Query: 120 KMKGKMSLHVHCHISGGHFLLDIFARLRYFIFCKELPV 157
K++ M LH HC +S + LD+ + LRY IF KE+P+
Sbjct: 52 KVQNDMCLHAHCFVSDPNSFLDLASELRYHIFSKEMPL 89
>Glyma16g23470.1
Length = 109
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 45/58 (77%)
Query: 53 FEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNKLQ 110
++ + + GVDENKH GNLPRTYTLTH+DIT+KLTLAISQTINNSQ+ W N L
Sbjct: 42 LSSTSIAMATCGVDENKHLGNLPRTYTLTHTDITAKLTLAISQTINNSQMGPWLNSLN 99
>Glyma16g23550.1
Length = 70
Score = 76.3 bits (186), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/38 (89%), Positives = 37/38 (97%)
Query: 64 GVDENKHPGNLPRTYTLTHSDITSKLTLAISQTINNSQ 101
GVDEN+H GNLPRTYTLTH+DIT+KLTLAISQTINNSQ
Sbjct: 33 GVDENQHLGNLPRTYTLTHTDITAKLTLAISQTINNSQ 70