Miyakogusa Predicted Gene

Lj4g3v1286240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1286240.1 Non Chatacterized Hit- tr|D5A8X0|D5A8X0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,46.15,0.0000000000009,LEUKOCYTE RECEPTOR CLUSTER (LRC) MEMBER
1,NULL; N-terminal domain of CBF1 interacting
co-rep,CBF1-in,CUFF.48759.1
         (218 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g14990.1                                                       183   1e-46

>Glyma17g14990.1 
          Length = 234

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 97/163 (59%), Positives = 108/163 (66%), Gaps = 11/163 (6%)

Query: 1   MGGHGGLNILPQKRWNVYNFDNREKVRRDEEEAAKEEQLKREQARKRDTEFRLERLRTAK 60
           MGGHGGLNILPQKRWNVYNFDNREKVRRDEE+AA+EEQLKRE+ RKRD E RL+RLR A+
Sbjct: 1   MGGHGGLNILPQKRWNVYNFDNREKVRRDEEQAAREEQLKREETRKRDAELRLDRLRVAR 60

Query: 61  GLAXXXXXXXXXXXXXV-------AADPGHINLFEGIKIFDPVXXXXXXXXXXXDSRXXX 113
           GLA                     ++DPGHINLFEGI IFDP+             R   
Sbjct: 61  GLAPSIPPPPESEPQPSSRSEPVPSSDPGHINLFEGINIFDPIQKDGAAERDWAKRRKKI 120

Query: 114 XX----XXEEVRVVGPEDEKYRLGYGVAGKGVQLPWYVRKPIG 152
                   +    VGPEDEKYRLGYG+AGKGVQLPWY+RKP G
Sbjct: 121 EKGGGPKPKPTVSVGPEDEKYRLGYGLAGKGVQLPWYLRKPDG 163