Miyakogusa Predicted Gene

Lj4g3v1286210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1286210.1 tr|B9GVG0|B9GVG0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_757344 PE=4
SV=1,59.32,0.00000000000006,HMA, heavy metal-associated domain,Heavy
metal-associated domain, HMA; HMA_2,Heavy metal-associated
,CUFF.48758.1
         (111 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g15000.1                                                       148   1e-36
Glyma13g19630.1                                                        50   5e-07
Glyma10g05250.1                                                        50   6e-07
Glyma02g19380.1                                                        49   1e-06
Glyma10g14110.1                                                        49   1e-06
Glyma19g35870.2                                                        49   1e-06
Glyma12g08030.1                                                        48   3e-06
Glyma19g35870.1                                                        47   4e-06
Glyma11g15400.1                                                        46   9e-06
Glyma10g34880.1                                                        46   9e-06

>Glyma17g15000.1 
          Length = 113

 Score =  148 bits (374), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/111 (66%), Positives = 89/111 (80%)

Query: 1   MAINETEISMKPDENEYRSLLYMANLTLPLFQVVVITANMECNGCRGRVSRVVSKMTGLT 60
           MAIN+TEI MK   +  RSLL++ NLTLP FQVVVI ANM CNGCRGRVSRVVSK+TGLT
Sbjct: 1   MAINKTEICMKATTSNKRSLLHLENLTLPSFQVVVIAANMGCNGCRGRVSRVVSKITGLT 60

Query: 61  EYTIDVSKKEVTLKGDFIAHCNFKDENLRSITLKSATIRLKSMFSCLNNFD 111
           EYT+DV KKEVT+KGDFIA+CNF++E +R  TL+SA    KS+ + L + D
Sbjct: 61  EYTVDVRKKEVTIKGDFIANCNFQNETIRRNTLQSANDPPKSLSTFLTHSD 111


>Glyma13g19630.1 
          Length = 276

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)

Query: 32  QVVVITANMECNGCRGRVSRVVSKMTGLTEYTIDVSKKEVTLKGDF 77
           QVVV+  ++ C GC G+V + +S+M G+T + ID + K+VT+ GD 
Sbjct: 194 QVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFASKKVTVVGDV 239


>Glyma10g05250.1 
          Length = 279

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)

Query: 32  QVVVITANMECNGCRGRVSRVVSKMTGLTEYTIDVSKKEVTLKGDF 77
           QVVV+  ++ C GC G+V + +S+M G+T + ID + K+VT+ GD 
Sbjct: 195 QVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFAAKKVTVVGDV 240


>Glyma02g19380.1 
          Length = 130

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 5/61 (8%)

Query: 32 QVVVITANMECNGCRGRVSRVVSKMTGLTEYTIDVSKKEVTLKGDFIAHCNFKDENLRSI 91
          Q VV+   M C GC G V+RV+ KM G+  + ID+ +++VT+KG+        DE L+++
Sbjct: 4  QTVVLKVGMSCQGCAGAVNRVLGKMEGVESFDIDLKEQKVTVKGNV-----EPDEVLQAV 58

Query: 92 T 92
          +
Sbjct: 59 S 59


>Glyma10g14110.1 
          Length = 130

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 5/61 (8%)

Query: 32 QVVVITANMECNGCRGRVSRVVSKMTGLTEYTIDVSKKEVTLKGDFIAHCNFKDENLRSI 91
          Q VV+   M C GC G V+RV+ KM G+  + ID+ +++VT+KG+        DE L+++
Sbjct: 4  QTVVLKVGMSCQGCAGAVNRVLEKMEGVESFDIDLKEQKVTVKGNV-----QPDEVLQAV 58

Query: 92 T 92
          +
Sbjct: 59 S 59


>Glyma19g35870.2 
          Length = 260

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 37/60 (61%)

Query: 17  YRSLLYMANLTLPLFQVVVITANMECNGCRGRVSRVVSKMTGLTEYTIDVSKKEVTLKGD 76
           Y  +L + ++     QVV +  ++ C GC G+V + +S+M G+T + ID + K+VT+ GD
Sbjct: 169 YDPVLALTDVNKEKAQVVELRVSLHCKGCEGKVRKHLSRMRGVTSFNIDFAAKKVTVVGD 228


>Glyma12g08030.1 
          Length = 240

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 31/45 (68%)

Query: 32  QVVVITANMECNGCRGRVSRVVSKMTGLTEYTIDVSKKEVTLKGD 76
           QVVV+  ++ C  C G+V + +SKM G+T ++ID+  K+V + GD
Sbjct: 154 QVVVLRVSLHCKACEGKVRKHISKMEGVTSFSIDMETKKVIIVGD 198


>Glyma19g35870.1 
          Length = 290

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 31/45 (68%)

Query: 32  QVVVITANMECNGCRGRVSRVVSKMTGLTEYTIDVSKKEVTLKGD 76
           QVV +  ++ C GC G+V + +S+M G+T + ID + K+VT+ GD
Sbjct: 210 QVVELRVSLHCKGCEGKVRKHLSRMRGVTSFNIDFAAKKVTVVGD 254


>Glyma11g15400.1 
          Length = 233

 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 30/44 (68%)

Query: 33  VVVITANMECNGCRGRVSRVVSKMTGLTEYTIDVSKKEVTLKGD 76
           VVV+  ++ C  C G+V + +SKM G+T ++ID+  K+V + GD
Sbjct: 148 VVVLRVSLHCKACEGKVRKHISKMEGVTSFSIDMESKKVIIIGD 191


>Glyma10g34880.1 
          Length = 100

 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)

Query: 12 PDENEYRSLLYMANLTLPLFQVVVITANMECNGCRGRVSRVVSKMTGLTEYTIDVSKKEV 71
          P    Y  +       + + Q VV+   M C GC G V RV+ K+ G+  Y ID+ +++V
Sbjct: 2  PKTQSYHFISSFVVHPVTMSQTVVLKVGMSCEGCVGAVKRVLGKLDGVESYDIDLKEQKV 61

Query: 72 TLKGD 76
           +KG+
Sbjct: 62 VVKGN 66