Miyakogusa Predicted Gene

Lj4g3v1259130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1259130.1 tr|B9H0P1|B9H0P1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_712927 PE=4
SV=1,44.83,8e-19,coiled-coil,NULL,CUFF.48716.1
         (96 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g14710.5                                                       123   5e-29
Glyma04g14710.4                                                       123   5e-29
Glyma04g14710.3                                                       123   5e-29
Glyma04g14710.2                                                       123   5e-29
Glyma04g14710.1                                                       123   5e-29
Glyma09g34810.1                                                       121   2e-28

>Glyma04g14710.5 
          Length = 146

 Score =  123 bits (308), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/145 (50%), Positives = 80/145 (55%), Gaps = 53/145 (36%)

Query: 1   MDSVVDSLNNAYQDLVDAAANVLEAKENVGALETTATDTAPENFKQKLILFKVACDQAEE 60
           MDS+VDSLNNAYQD V AAANVLEAKEN G+++T ATDTA ENFKQK  LF+VACDQAEE
Sbjct: 1   MDSIVDSLNNAYQDFVAAAANVLEAKENAGSIKTMATDTALENFKQKWELFRVACDQAEE 60

Query: 61  F-----------------------------------------------VRRLFIELQHSS 73
           F                                               VR L IELQH S
Sbjct: 61  FVESVKQRIGSECLVDEATRPVAGKPGQATMTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 74  G------ALSHPSAPFDVAFSEDAS 92
           G      AL+HPSAPFD  FSEDA+
Sbjct: 121 GAGSANSALTHPSAPFDARFSEDAA 145


>Glyma04g14710.4 
          Length = 146

 Score =  123 bits (308), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/145 (50%), Positives = 80/145 (55%), Gaps = 53/145 (36%)

Query: 1   MDSVVDSLNNAYQDLVDAAANVLEAKENVGALETTATDTAPENFKQKLILFKVACDQAEE 60
           MDS+VDSLNNAYQD V AAANVLEAKEN G+++T ATDTA ENFKQK  LF+VACDQAEE
Sbjct: 1   MDSIVDSLNNAYQDFVAAAANVLEAKENAGSIKTMATDTALENFKQKWELFRVACDQAEE 60

Query: 61  F-----------------------------------------------VRRLFIELQHSS 73
           F                                               VR L IELQH S
Sbjct: 61  FVESVKQRIGSECLVDEATRPVAGKPGQATMTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 74  G------ALSHPSAPFDVAFSEDAS 92
           G      AL+HPSAPFD  FSEDA+
Sbjct: 121 GAGSANSALTHPSAPFDARFSEDAA 145


>Glyma04g14710.3 
          Length = 146

 Score =  123 bits (308), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/145 (50%), Positives = 80/145 (55%), Gaps = 53/145 (36%)

Query: 1   MDSVVDSLNNAYQDLVDAAANVLEAKENVGALETTATDTAPENFKQKLILFKVACDQAEE 60
           MDS+VDSLNNAYQD V AAANVLEAKEN G+++T ATDTA ENFKQK  LF+VACDQAEE
Sbjct: 1   MDSIVDSLNNAYQDFVAAAANVLEAKENAGSIKTMATDTALENFKQKWELFRVACDQAEE 60

Query: 61  F-----------------------------------------------VRRLFIELQHSS 73
           F                                               VR L IELQH S
Sbjct: 61  FVESVKQRIGSECLVDEATRPVAGKPGQATMTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 74  G------ALSHPSAPFDVAFSEDAS 92
           G      AL+HPSAPFD  FSEDA+
Sbjct: 121 GAGSANSALTHPSAPFDARFSEDAA 145


>Glyma04g14710.2 
          Length = 146

 Score =  123 bits (308), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/145 (50%), Positives = 80/145 (55%), Gaps = 53/145 (36%)

Query: 1   MDSVVDSLNNAYQDLVDAAANVLEAKENVGALETTATDTAPENFKQKLILFKVACDQAEE 60
           MDS+VDSLNNAYQD V AAANVLEAKEN G+++T ATDTA ENFKQK  LF+VACDQAEE
Sbjct: 1   MDSIVDSLNNAYQDFVAAAANVLEAKENAGSIKTMATDTALENFKQKWELFRVACDQAEE 60

Query: 61  F-----------------------------------------------VRRLFIELQHSS 73
           F                                               VR L IELQH S
Sbjct: 61  FVESVKQRIGSECLVDEATRPVAGKPGQATMTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 74  G------ALSHPSAPFDVAFSEDAS 92
           G      AL+HPSAPFD  FSEDA+
Sbjct: 121 GAGSANSALTHPSAPFDARFSEDAA 145


>Glyma04g14710.1 
          Length = 146

 Score =  123 bits (308), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/145 (50%), Positives = 80/145 (55%), Gaps = 53/145 (36%)

Query: 1   MDSVVDSLNNAYQDLVDAAANVLEAKENVGALETTATDTAPENFKQKLILFKVACDQAEE 60
           MDS+VDSLNNAYQD V AAANVLEAKEN G+++T ATDTA ENFKQK  LF+VACDQAEE
Sbjct: 1   MDSIVDSLNNAYQDFVAAAANVLEAKENAGSIKTMATDTALENFKQKWELFRVACDQAEE 60

Query: 61  F-----------------------------------------------VRRLFIELQHSS 73
           F                                               VR L IELQH S
Sbjct: 61  FVESVKQRIGSECLVDEATRPVAGKPGQATMTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 74  G------ALSHPSAPFDVAFSEDAS 92
           G      AL+HPSAPFD  FSEDA+
Sbjct: 121 GAGSANSALTHPSAPFDARFSEDAA 145


>Glyma09g34810.1 
          Length = 146

 Score =  121 bits (303), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/145 (50%), Positives = 80/145 (55%), Gaps = 53/145 (36%)

Query: 1   MDSVVDSLNNAYQDLVDAAANVLEAKENVGALETTATDTAPENFKQKLILFKVACDQAEE 60
           MDS+VDSLNNAYQD V AAANVLEAKEN G+++TTATDTA ENFKQK  LF+VACDQAEE
Sbjct: 1   MDSIVDSLNNAYQDFVVAAANVLEAKENAGSIKTTATDTALENFKQKWELFRVACDQAEE 60

Query: 61  F-----------------------------------------------VRRLFIELQHSS 73
           F                                               VR L IELQH S
Sbjct: 61  FVESVKQRIGSECLVDEATRPVAGKPGQATMTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 74  G------ALSHPSAPFDVAFSEDAS 92
           G      AL+HPSA FD  FSEDA+
Sbjct: 121 GAGSANSALTHPSAQFDARFSEDAA 145