Miyakogusa Predicted Gene
- Lj4g3v1259110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1259110.1 tr|G7JIW4|G7JIW4_MEDTR Asparaginyl-tRNA
synthetase OS=Medicago truncatula GN=MTR_4g100920 PE=3
SV=1,82.11,0,asnS: asparagine--tRNA ligase,Asparagine-tRNA ligase,
class IIb; tRNA-synt_2,Aminoacyl-tRNA syntheta,CUFF.48715.1
(375 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g04660.1 541 e-154
Glyma17g15090.1 539 e-153
Glyma05g36140.1 243 3e-64
Glyma08g03500.1 235 6e-62
Glyma16g09690.1 162 4e-40
Glyma03g22320.1 105 8e-23
Glyma09g16920.1 87 3e-17
>Glyma05g04660.1
Length = 551
Score = 541 bits (1393), Expect = e-154, Method: Compositional matrix adjust.
Identities = 258/327 (78%), Positives = 280/327 (85%), Gaps = 2/327 (0%)
Query: 50 FCAATLPSADHKVSKFRKKLKIADVKAXXXXXXXXXXXXXXGWVRTLRPQATVTFLEIND 109
FCAATL +AD++V +FR+KL+++++K GWVRTLR Q+ VTFLEIND
Sbjct: 59 FCAATLRTADNRVQQFRRKLRVSEIKEGDGADVFGRNLVVQGWVRTLRIQSIVTFLEIND 118
Query: 110 GSCLSNMQCVLDPEVEGYDQV--GLITTGASVWVQGVVVESQGAXXXXXXXXXXXXXXXX 167
GSCLSNMQCVL+ E EGYDQV GL+TTGASVWVQGVVV+SQG+
Sbjct: 119 GSCLSNMQCVLNSEAEGYDQVESGLVTTGASVWVQGVVVKSQGSKQKVELKVNKIVLIGK 178
Query: 168 SDPSFPIQKKRVSNEFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPI 227
SDPSFPIQKKR S EFLRTKAHLR RTNTFGAVARVRNALAYATHKFFQENGFVWVSSPI
Sbjct: 179 SDPSFPIQKKRASREFLRTKAHLRARTNTFGAVARVRNALAYATHKFFQENGFVWVSSPI 238
Query: 228 ITASDCEGAGEQFCVTTLIPSSHESADSPIDAIPKINDKLIDWSQDFFGKPAFLTVSGQL 287
ITASDCEGAGEQFCVTTLIPSSHE+ DSP+DAIPK ND LIDWSQDFFGKPAFLTVSGQL
Sbjct: 239 ITASDCEGAGEQFCVTTLIPSSHETTDSPVDAIPKTNDGLIDWSQDFFGKPAFLTVSGQL 298
Query: 288 NAETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQFVI 347
N ETYAT+LSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQFVI
Sbjct: 299 NGETYATSLSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQFVI 358
Query: 348 RYILDNCKEDMEFFNTWTDKGIIDRLS 374
R++LDNCKEDMEFF+TW +KGIIDRLS
Sbjct: 359 RHVLDNCKEDMEFFDTWINKGIIDRLS 385
>Glyma17g15090.1
Length = 550
Score = 539 bits (1388), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/327 (78%), Positives = 280/327 (85%), Gaps = 2/327 (0%)
Query: 50 FCAATLPSADHKVSKFRKKLKIADVKAXXXXXXXXXXXXXXGWVRTLRPQATVTFLEIND 109
FCAATL ++D++V +FR+KL+++++K GWVRTLR Q++VTFLEIND
Sbjct: 58 FCAATLRTSDNRVQQFRRKLRVSEIKEGDGADVLGRNLVVQGWVRTLRIQSSVTFLEIND 117
Query: 110 GSCLSNMQCVLDPEVEGYDQV--GLITTGASVWVQGVVVESQGAXXXXXXXXXXXXXXXX 167
GSCLSNMQCVL+ E EGYDQV GL+TTGASVWVQGVVV+SQG+
Sbjct: 118 GSCLSNMQCVLNSEAEGYDQVESGLVTTGASVWVQGVVVKSQGSKQKVELKVNKIVLIGK 177
Query: 168 SDPSFPIQKKRVSNEFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPI 227
SDPSFPIQKKR S EFLRTKAHLR RTNTFGAVARVRNALAYATHKFFQENGFVWVSSPI
Sbjct: 178 SDPSFPIQKKRASREFLRTKAHLRARTNTFGAVARVRNALAYATHKFFQENGFVWVSSPI 237
Query: 228 ITASDCEGAGEQFCVTTLIPSSHESADSPIDAIPKINDKLIDWSQDFFGKPAFLTVSGQL 287
ITASDCEGAGEQFCVTTLIPSSHE+ DSP+DAIPK ND LIDWSQDFFGKPAFLTVSGQL
Sbjct: 238 ITASDCEGAGEQFCVTTLIPSSHETNDSPVDAIPKTNDGLIDWSQDFFGKPAFLTVSGQL 297
Query: 288 NAETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQFVI 347
N ETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQFVI
Sbjct: 298 NGETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQFVI 357
Query: 348 RYILDNCKEDMEFFNTWTDKGIIDRLS 374
R++LDNCKEDMEFF+ W +KGIIDRLS
Sbjct: 358 RHVLDNCKEDMEFFDAWINKGIIDRLS 384
>Glyma05g36140.1
Length = 567
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 143/350 (40%), Positives = 186/350 (53%), Gaps = 67/350 (19%)
Query: 91 GWVRTLRP--QATVTFLEINDGSCLSNMQCVLDPEVEGYDQVGLITTGASVWVQG-VVVE 147
GWV+T R + FLEINDGSC N+Q +++ + Q L+ TG V V G + +
Sbjct: 53 GWVKTGRKADKDAFAFLEINDGSCAGNLQVIVEAALGELGQ--LVPTGTCVVVDGHLKLP 110
Query: 148 SQGAXXXXXXXXXXXXXXXXSDPS-FPIQKKRVSNEFLRTKAHLRPRTNTFGAVARVRNA 206
G DP+ +P+ K R++ EFLR HLR RTNT AVAR+RNA
Sbjct: 111 PAGTRQKIELRADKVLHVGPVDPAKYPLPKMRLTLEFLRDFVHLRSRTNTISAVARIRNA 170
Query: 207 LAYATHKFFQENGFVWV----------------------------------SSPIITASD 232
LAYATH FF + GF++V +P + +D
Sbjct: 171 LAYATHTFFNKEGFLYVHTPIVTTSDCEGAGEMFQVTTLLSEAERLEKELLQNPPPSEAD 230
Query: 233 CEGA-------GEQFCVTTLIPSSHESADSPID--------------------AIPKIND 265
E A GE +S + + +D IPK +D
Sbjct: 231 VEAARVVVQEKGEVVSQLKAAKASKQEIGAAVDQLKKAKESLAKVEEWSKLKPGIPKKDD 290
Query: 266 KLIDWSQDFFGKPAFLTVSGQLNAETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEP 325
+D+ +DFF + AFLTVSGQL E+YA ALS VYTFGPTFRAENS+TSRHLAEFWM+EP
Sbjct: 291 GKVDYGKDFFARQAFLTVSGQLQVESYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEP 350
Query: 326 ELAFADLNDDMACATAYLQFVIRYILDNCKEDMEFFNTWTDKGIIDRLSV 375
E+AFA+L DDM CA AY++F+ +++LDNC EDMEF DKG IDRL +
Sbjct: 351 EIAFAELKDDMNCAEAYVKFMCQWLLDNCLEDMEFMADKFDKGCIDRLKL 400
>Glyma08g03500.1
Length = 567
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 139/350 (39%), Positives = 184/350 (52%), Gaps = 67/350 (19%)
Query: 91 GWVRTLRP--QATVTFLEINDGSCLSNMQCVLDPEVEGYDQVGLITTGASVWVQG-VVVE 147
GWV+T R + FLEINDGSC N+Q +++ + Q L+ TG V G + +
Sbjct: 53 GWVKTGRKADKDAFAFLEINDGSCAGNLQVIVEAALGELGQ--LVPTGTCVVFDGHLKLP 110
Query: 148 SQGAXXXXXXXXXXXXXXXXSDPS-FPIQKKRVSNEFLRTKAHLRPRTNTFGAVARVRNA 206
G DP+ +P+ K R++ EFLR HLR RTNT AVAR+RNA
Sbjct: 111 PSGTKQKIELRADKVLHVGPVDPAKYPLPKMRLTLEFLRDFVHLRSRTNTISAVARIRNA 170
Query: 207 LAYATHKFFQENGFV----------------------------------WVSSPIITASD 232
LAYATH FF + GF+ ++ +P + +D
Sbjct: 171 LAYATHTFFNKEGFLYVHTPIVTTSDCEGAGEMFQVTTLLSEAERLEKEFLQNPPPSEAD 230
Query: 233 CEGA-------GEQFCVTTLIPSSHESADSPID--------------------AIPKIND 265
E A GE +S + + +D IP+ +D
Sbjct: 231 VEVARFVVQEKGEVVSQLKAAKASKQEIGAAVDQLKKAKESFAKVEERSKLKPGIPRKDD 290
Query: 266 KLIDWSQDFFGKPAFLTVSGQLNAETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEP 325
+D+ +DFF + AFLTVSGQL E+Y ALS VYTFGPTFRAENS+TSRHLAEFWM+EP
Sbjct: 291 GKVDYGKDFFARQAFLTVSGQLQVESYVCALSSVYTFGPTFRAENSHTSRHLAEFWMVEP 350
Query: 326 ELAFADLNDDMACATAYLQFVIRYILDNCKEDMEFFNTWTDKGIIDRLSV 375
E+AFA+L DDM CA AY++F+ +++LDNC EDMEF DKG IDRL +
Sbjct: 351 EIAFAELKDDMNCAEAYVKFMCQWLLDNCLEDMEFMADKFDKGCIDRLKL 400
>Glyma16g09690.1
Length = 624
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 162/338 (47%), Gaps = 60/338 (17%)
Query: 94 RTLRPQATVTFLEINDGSCLSNMQCVLDPEVEGYDQVGLITTGASVWVQGVVVESQGAXX 153
+ L P+A+ +L + DGSC ++Q V+D V + L+ TG + V+G + ++G
Sbjct: 119 KVLPPKASTAYLLLTDGSCAPSLQVVVDSSVATPSR--LVPTGTCLLVEGQLERAEGKHA 176
Query: 154 XXXXXXXXXXXXXXSDPSFPIQKKRVSNEFLRTKAHLRPRTNTFGAVARVRNALAYATHK 213
+P+ KKR+ + LR + RPRT T V R+R++L++ATH
Sbjct: 177 IELIAEKVLHIGTVDFDKYPLSKKRIPLDKLRDYSQFRPRTTTVATVMRIRSSLSFATHT 236
Query: 214 FFQENGFVWVSSPII---------------------------TASDCEG---------AG 237
FF E+ F+ V PII T + EG A
Sbjct: 237 FFNEHAFIDVQVPIITSTDSEGFSNMFRVNTLEQKAEKEKLETVYETEGVSLEHVKAAAK 296
Query: 238 EQFCVTTLIP---SSHESADSPIDAIPKIN-------------------DKLIDWSQDFF 275
E+ + + S+ E+ + + + K N D +D S++FF
Sbjct: 297 EKSNIVEHLERTESNREALAAAVQDLRKTNELASQLEAREKRKLGASFKDDKVDSSKEFF 356
Query: 276 GKPAFLTVSGQLNAETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDD 335
+LTVSG+L+ E+YA AL +VY+FGP F A+ +N+++H AE WMIE E+AF+ L D
Sbjct: 357 PFQTYLTVSGRLHLESYACALGNVYSFGPRFLADKTNSAKHAAEMWMIEVEMAFSQLKDS 416
Query: 336 MACATAYLQFVIRYILDNCKEDMEFFNTWTDKGIIDRL 373
M CA + +++ ++L +C E+M F D ++RL
Sbjct: 417 MICANDFFKYLCNWVLVHCSEEMTFVAKRIDNTCMNRL 454
>Glyma03g22320.1
Length = 635
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 75/110 (68%)
Query: 264 NDKLIDWSQDFFGKPAFLTVSGQLNAETYATALSDVYTFGPTFRAENSNTSRHLAEFWMI 323
+D +D S++FF +LTVSG+L+ E+YA AL +VY+FGP F A+ +++++H AE WM+
Sbjct: 360 DDDKVDSSKEFFPFQTYLTVSGRLHLESYACALGNVYSFGPRFLADKTDSAKHAAEMWMV 419
Query: 324 EPELAFADLNDDMACATAYLQFVIRYILDNCKEDMEFFNTWTDKGIIDRL 373
E E+AF+ L D M CA + +++ ++L +C E+M+F D ++RL
Sbjct: 420 EVEMAFSLLKDSMNCANDFFKYLCNWVLIHCSEEMKFVAKRIDNTCVNRL 469
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 94 RTLRPQATVTFLEINDGSCLSNMQCVLDPEVEGYDQVGLITTGASVWVQGVVVESQGAXX 153
+ L P+A+ +L + DGSC+ ++Q V+D V + L+ TG + V+G + ++G
Sbjct: 133 KVLPPKASTAYLLLTDGSCVPSLQVVVDSSVATPSR--LLPTGTCLLVEGQLERAEGKHA 190
Query: 154 XXXXXXXXXXXXXXSDPSFPIQKKRVSNEFLRTKAHLRPRTNTFGAVARVRNALAYATHK 213
+P+ KKR+ + LR + RPRT T V R+R++L++ATH
Sbjct: 191 IELKAEKVLHIGTVDFDKYPLSKKRIPLDTLRDYSQFRPRTTTVATVVRIRSSLSFATHT 250
Query: 214 FFQENGFVWVSSPIITASDCEGAGEQFCVTTL 245
FF E+ F+ V PIIT++D EG V TL
Sbjct: 251 FFNEHAFIDVQVPIITSTDSEGFSNMLKVNTL 282
>Glyma09g16920.1
Length = 245
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 169 DPS-FPIQKKRVSNEFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPI 227
DP+ +P+ K R++ EFLR HL +TNT AVAR+RN+L ATH FF + GF++V +PI
Sbjct: 112 DPAKYPLPKMRLTLEFLRDFIHLHSKTNTIFAVARIRNSLTCATHTFFNKEGFLYVHTPI 171
Query: 228 ITASDCEGAGEQFCV 242
++ SDCEG GE F +
Sbjct: 172 VSTSDCEGVGEMFQI 186