Miyakogusa Predicted Gene

Lj4g3v1223620.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1223620.2 tr|G7JHQ5|G7JHQ5_MEDTR Gibberellin
2-beta-dioxygenase OS=Medicago truncatula GN=MTR_4g100600 PE=3
SV,79.19,0,OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN,NULL;
no description,NULL; seg,NULL; Clavaminate,CUFF.49346.2
         (154 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g04960.1                                                       228   1e-60
Glyma11g03810.1                                                       178   2e-45
Glyma17g15350.1                                                       155   2e-38
Glyma01g01170.2                                                       108   2e-24
Glyma01g01170.1                                                       105   2e-23
Glyma16g08470.2                                                       102   2e-22
Glyma16g08470.1                                                        99   2e-21
Glyma11g03830.1                                                        97   7e-21

>Glyma05g04960.1 
          Length = 318

 Score =  228 bits (582), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 108/149 (72%), Positives = 124/149 (83%), Gaps = 2/149 (1%)

Query: 1   MNLARKEYRGYSPLYAEKLDPTSLSKGDPKESYYVGPLADT--ASLNQWPSEELLPNWRP 58
           M+LARKEYRGY+PLYAE LDPTSLSKGDPKE+YY+GP+ DT  A LNQWPSEELLPNWRP
Sbjct: 65  MDLARKEYRGYTPLYAETLDPTSLSKGDPKETYYIGPIEDTSIAHLNQWPSEELLPNWRP 124

Query: 59  TMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPGEMGSGEEIC 118
           TM+SLYWK L AGK            +EDYFEKIGA+ KP++FLRLLHYPGE+GS E+IC
Sbjct: 125 TMKSLYWKLLAAGKSLLSLIALSLNLEEDYFEKIGALNKPASFLRLLHYPGELGSDEQIC 184

Query: 119 GASAHSDYGMITLLVTDGVPGLQVLSNSL 147
           GAS HSDYGMITLL+TDGVPGLQ+  + +
Sbjct: 185 GASPHSDYGMITLLMTDGVPGLQICKDKV 213


>Glyma11g03810.1 
          Length = 295

 Score =  178 bits (452), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 91/149 (61%), Positives = 109/149 (73%), Gaps = 9/149 (6%)

Query: 1   MNLARKEYRGYSPLYAEKLDPTSLSKGDPKESYYVGPLADTAS--LNQWPSEELLPNWRP 58
           M LARKE+RGY+P      DPT    GD KESYY+GP+AD+AS  LNQWPSEELL NWRP
Sbjct: 60  MKLARKEFRGYTPQ-----DPTLGLHGDSKESYYIGPMADSASVKLNQWPSEELLENWRP 114

Query: 59  TMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPGEMGSGEEIC 118
           ++E++YWK   AGK+           DED+F+KIGA+ KPSAFLRLL YPGEMG  +EIC
Sbjct: 115 SIEAIYWKLFEAGKKLYSLIALSLNMDEDFFDKIGAVDKPSAFLRLLRYPGEMGPHQEIC 174

Query: 119 GASAHSDYGMITLLVTDGVPGLQVLSNSL 147
             SAHSD G +TLL+TDGVPGLQ+  + L
Sbjct: 175 --SAHSDTGALTLLMTDGVPGLQICRDKL 201


>Glyma17g15350.1 
          Length = 329

 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/168 (52%), Positives = 108/168 (64%), Gaps = 26/168 (15%)

Query: 1   MNLARKEYRGYSPLYAEKLDPTSLSKGDPKESYYVGPLADT--ASLNQWPSEELLPNWRP 58
           ++LARKEYR Y+PLY+E LDPTSLS GDPKE+YY+GP+ DT  A LNQWPSE    ++R 
Sbjct: 65  LDLARKEYRSYTPLYSETLDPTSLSNGDPKETYYIGPIEDTSIAHLNQWPSEG---HFRI 121

Query: 59  TME------SLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPG--- 109
           T +       L  +  G  K+           +EDYFEKIGA+ K +AFLRLLHYP    
Sbjct: 122 TAKLETYNGILILETNGCWKKSAALIAMPLNLEEDYFEKIGALNKAAAFLRLLHYPVLSA 181

Query: 110 ------------EMGSGEEICGASAHSDYGMITLLVTDGVPGLQVLSN 145
                         GS E+ICGAS HSDYGMITLL+T+GVPGLQ L++
Sbjct: 182 VLLVGTGFSNRLSCGSDEQICGASPHSDYGMITLLMTEGVPGLQGLNS 229


>Glyma01g01170.2 
          Length = 331

 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 86/153 (56%), Gaps = 10/153 (6%)

Query: 3   LARKEYRGYSPLYAEKLDPTSLSKGDPKESYYVG-------PLADTASL--NQWPSEELL 53
           L  +++RGY+P+  E LDP +   GD KE YY+G       P +       N WP+ ++L
Sbjct: 73  LRNEQHRGYTPVLDELLDPENQVHGDYKEGYYIGVEKGEDDPQSKKPFYGPNNWPAPDVL 132

Query: 54  PNWRPTMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPGEMGS 113
           P WR TME  + + L  GK            D +YF++   + +P A LRLLHY G++  
Sbjct: 133 PGWRETMEKFHQETLEVGKAVAKMIALALDLDANYFDRPEILGEPIAILRLLHYEGQVSD 192

Query: 114 -GEEICGASAHSDYGMITLLVTDGVPGLQVLSN 145
             + + GA AH+D+G+ITLL TD VPGLQ+  +
Sbjct: 193 PSKGLYGAGAHTDFGLITLLATDDVPGLQICKD 225


>Glyma01g01170.1 
          Length = 332

 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 86/154 (55%), Gaps = 11/154 (7%)

Query: 3   LARKEYRGYSPLYAEKLDP-TSLSKGDPKESYYVG-------PLADTASL--NQWPSEEL 52
           L  +++RGY+P+  E LDP   +  GD KE YY+G       P +       N WP+ ++
Sbjct: 73  LRNEQHRGYTPVLDELLDPENQVHVGDYKEGYYIGVEKGEDDPQSKKPFYGPNNWPAPDV 132

Query: 53  LPNWRPTMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPGEMG 112
           LP WR TME  + + L  GK            D +YF++   + +P A LRLLHY G++ 
Sbjct: 133 LPGWRETMEKFHQETLEVGKAVAKMIALALDLDANYFDRPEILGEPIAILRLLHYEGQVS 192

Query: 113 S-GEEICGASAHSDYGMITLLVTDGVPGLQVLSN 145
              + + GA AH+D+G+ITLL TD VPGLQ+  +
Sbjct: 193 DPSKGLYGAGAHTDFGLITLLATDDVPGLQICKD 226


>Glyma16g08470.2 
          Length = 330

 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 86/156 (55%), Gaps = 11/156 (7%)

Query: 1   MNLARKE-YRGYSPLYAEKLDPTSLSKGDPKESYYVG-------PLADTASL--NQWPSE 50
           M + R E +RGY+P+  E LDP +   GD KE YY+G       P ++      N WP+ 
Sbjct: 69  MKILRNEKHRGYTPVLDELLDPENQVHGDYKEGYYIGVEKGEDDPESNKPFYGPNNWPAP 128

Query: 51  ELLPNWRPTMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPGE 110
            +LP WR TME  + + L  GK            D ++F++   + +P A LRLLHY G+
Sbjct: 129 GVLPGWRETMEKFHRETLEVGKAVAKIIALALDLDANFFDQPEMLGEPIATLRLLHYEGQ 188

Query: 111 MGSG-EEICGASAHSDYGMITLLVTDGVPGLQVLSN 145
           +    + + GA AH+DYG+ITLL TD V GLQ+  +
Sbjct: 189 VSDPLKGLYGAGAHTDYGLITLLATDDVSGLQICKD 224


>Glyma16g08470.1 
          Length = 331

 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 86/157 (54%), Gaps = 12/157 (7%)

Query: 1   MNLARKE-YRGYSPLYAEKLDP-TSLSKGDPKESYYVG-------PLADTASL--NQWPS 49
           M + R E +RGY+P+  E LDP   +  GD KE YY+G       P ++      N WP+
Sbjct: 69  MKILRNEKHRGYTPVLDELLDPENQVHVGDYKEGYYIGVEKGEDDPESNKPFYGPNNWPA 128

Query: 50  EELLPNWRPTMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPG 109
             +LP WR TME  + + L  GK            D ++F++   + +P A LRLLHY G
Sbjct: 129 PGVLPGWRETMEKFHRETLEVGKAVAKIIALALDLDANFFDQPEMLGEPIATLRLLHYEG 188

Query: 110 EMGSG-EEICGASAHSDYGMITLLVTDGVPGLQVLSN 145
           ++    + + GA AH+DYG+ITLL TD V GLQ+  +
Sbjct: 189 QVSDPLKGLYGAGAHTDYGLITLLATDDVSGLQICKD 225


>Glyma11g03830.1 
          Length = 179

 Score = 97.1 bits (240), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 74/126 (58%), Gaps = 15/126 (11%)

Query: 1   MNLARKEYRGYSPLYAEKLDPTSLSKGDPKESYYVGPLADT--ASLNQWPSEELLPNWRP 58
           M LA KE+RGY+P      DP+   +GD KESYY+GPL+D+  A+LNQWPS+E +     
Sbjct: 62  MKLAYKEFRGYTPP-----DPSLGLQGDSKESYYIGPLSDSTSANLNQWPSQEDI----- 111

Query: 59  TMESLYWKELGAGKEXXXXXXXXXXXDEDYFEKIGAIRKPSAFLRLLHYPGEMGSGEEIC 118
               ++    G GK+           DED+FEKIGA  KP+AFLRLLHYPG +     + 
Sbjct: 112 ---VVFLFHSGVGKKLLSLIALSLNMDEDFFEKIGAEDKPAAFLRLLHYPGLVALTVLVR 168

Query: 119 GASAHS 124
             S HS
Sbjct: 169 VGSYHS 174