Miyakogusa Predicted Gene

Lj4g3v1218370.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1218370.1 CUFF.48659.1
         (103 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g01180.1                                                       161   1e-40
Glyma09g36140.1                                                       159   8e-40
Glyma12g02080.1                                                        57   6e-09

>Glyma12g01180.1 
          Length = 256

 Score =  161 bits (408), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 79/103 (76%), Positives = 82/103 (79%), Gaps = 1/103 (0%)

Query: 1   MRGVKSSGMLMAASDAKHENVELLFPPEEATPGERIWFGSEDEKDXXXXXXXXXXXXXXX 60
           MRGVKS GMLMAASDAKHENVELLFPPEEATPGERIWFG+EDEKD               
Sbjct: 155 MRGVKSCGMLMAASDAKHENVELLFPPEEATPGERIWFGTEDEKDNQPDAATPNQLQKKK 214

Query: 61  XWELVQPHLKTDASCTALLGGVHVMRTSLGSVACQSLQNANIS 103
            WELVQPHLKTD SC A+LG  HVMRTS+GSVACQSLQNANIS
Sbjct: 215 IWELVQPHLKTDTSCIAMLGE-HVMRTSVGSVACQSLQNANIS 256


>Glyma09g36140.1 
          Length = 256

 Score =  159 bits (401), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 78/103 (75%), Positives = 82/103 (79%), Gaps = 1/103 (0%)

Query: 1   MRGVKSSGMLMAASDAKHENVELLFPPEEATPGERIWFGSEDEKDXXXXXXXXXXXXXXX 60
           MRGVKS GMLMAASDAKHENVELLFPPEEA PGERIWFG+EDEKD               
Sbjct: 155 MRGVKSCGMLMAASDAKHENVELLFPPEEAIPGERIWFGTEDEKDNQPDAATPNQLQKKK 214

Query: 61  XWELVQPHLKTDASCTALLGGVHVMRTSLGSVACQSLQNANIS 103
            WELVQPHLKTDASC A+LG  HVMR+S+GSVACQSLQNANIS
Sbjct: 215 IWELVQPHLKTDASCIAMLGE-HVMRSSVGSVACQSLQNANIS 256


>Glyma12g02080.1 
          Length = 803

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 12/103 (11%)

Query: 1   MRGVKSSGMLMAASDAKHENVELLFPPEEATPGERIWF-GSEDEKDXXXXXXXXXXXXXX 59
           MRG+KS  M++AASD  H  VEL+ PP  A PGERI F G E   D              
Sbjct: 708 MRGIKSQAMVLAASDGDHTKVELVEPPSSAQPGERITFPGYEGNPD-------ELLNPKK 760

Query: 60  XXWELVQPHLKTDASCTALLGGVHVMRTS----LGSVACQSLQ 98
             WE +Q  L T+    A    V +  ++    + S++C S++
Sbjct: 761 KVWETLQVDLHTNEELVACYKNVPLTTSAGVCKVSSISCGSIR 803