Miyakogusa Predicted Gene

Lj4g3v1212380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1212380.1 Non Chatacterized Hit- tr|I3SGH2|I3SGH2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.61,0,Chlorophyll a-b binding protein,Chlorophyll a/b binding
protein domain; seg,NULL,CUFF.48646.1
         (259 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g15730.1                                                       355   3e-98
Glyma05g05450.1                                                       339   2e-93
Glyma01g41320.1                                                       286   1e-77

>Glyma17g15730.1 
          Length = 264

 Score =  355 bits (910), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 184/272 (67%), Positives = 203/272 (74%), Gaps = 23/272 (8%)

Query: 1   MQTMSTTMASFSPLTRFSATLSSSNSKPHLTQNHFFFTLRPKNLPLSPLKWKXXXXXXXX 60
           MQ+MSTTMASFSP T FSA  SSS  +  + +N+ FF+LR K+L  SPLK          
Sbjct: 3   MQSMSTTMASFSPPTHFSAAPSSSKLR-LVYKNNNFFSLRSKSLAFSPLK-------AAA 54

Query: 61  XXXXXXXXVESPPEKI-------------SVGTNGXXXXXXXXXXEELKIPGGFEDPRWV 107
                   VE PPE+              SVGTNG          EE+K+  GF DPRWV
Sbjct: 55  AENGVGTAVEPPPEQAVSVPELPPPAVGNSVGTNGSAAVAVES--EEVKVKTGFVDPRWV 112

Query: 108 AGTWDLMQFRKNGSTDWDAVIDAEARRRKWLQDNPESSSNENPVVFDTSIVPWWAWIKRF 167
           +GTWDL QF+KNG+TDWDAVIDAEARRRKWL+DNPESSSNENPVVFDTSI+PWWAW+KRF
Sbjct: 113 SGTWDLKQFQKNGTTDWDAVIDAEARRRKWLEDNPESSSNENPVVFDTSIIPWWAWMKRF 172

Query: 168 HLPEAERLNGRAAMIGFFMAYLVDSLTGVGLVDQTNNFVCKTLLFIAVAGVLLIRKNEDL 227
           HLPEAE LNGRAAM+GFFMAY VDSLTGVGLVDQ  NF CKTLLF+AV GVLLIRKNED 
Sbjct: 173 HLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVLGVLLIRKNEDF 232

Query: 228 ENLKKLFDETTFYDKQWQATWQDENSNTSKKE 259
           ENLKKLFDETT YDKQWQATWQDENS+TSK E
Sbjct: 233 ENLKKLFDETTLYDKQWQATWQDENSSTSKNE 264


>Glyma05g05450.1 
          Length = 264

 Score =  339 bits (869), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 191/274 (69%), Positives = 207/274 (75%), Gaps = 27/274 (9%)

Query: 1   MQTMSTTMASFSPLTRFSATLSSSNSKPHLT-QNHFFFTLRPKNLPLSPLKWKXXXXXXX 59
           MQ+MSTTMASFSP T FSAT SSS  KP L  +N+FFF+LR ++L LSPLK         
Sbjct: 3   MQSMSTTMASFSPPTHFSATPSSS--KPRLVYKNNFFFSLRSRSLSLSPLK-------AA 53

Query: 60  XXXXXXXXXVESPPEKI--------------SVGTNGXXXXXXXXXXEELKIPGGFEDPR 105
                    VE PPE+               SVGTNG          E +K+   F DPR
Sbjct: 54  ASENGVGTAVEPPPEQAVPVPEPSLPPVDNSSVGTNGSAVAVES---EVVKVQSSFVDPR 110

Query: 106 WVAGTWDLMQFRKNGSTDWDAVIDAEARRRKWLQDNPESSSNENPVVFDTSIVPWWAWIK 165
           WVAGTWDL QF+KNG+TDWDAVIDAEARRRKWL+DNPESSSNENPVVFDTSIVPWWAW+K
Sbjct: 111 WVAGTWDLKQFQKNGTTDWDAVIDAEARRRKWLEDNPESSSNENPVVFDTSIVPWWAWMK 170

Query: 166 RFHLPEAERLNGRAAMIGFFMAYLVDSLTGVGLVDQTNNFVCKTLLFIAVAGVLLIRKNE 225
           RFHLPEAE LNGRAAMIGFFMAY VDSLTGVGLVDQ +NF CKTLLF+AV GVLLIRKNE
Sbjct: 171 RFHLPEAELLNGRAAMIGFFMAYFVDSLTGVGLVDQMSNFFCKTLLFVAVLGVLLIRKNE 230

Query: 226 DLENLKKLFDETTFYDKQWQATWQDENSNTSKKE 259
           DLENLKKLFDETT YDKQWQATWQDENS+TSK E
Sbjct: 231 DLENLKKLFDETTLYDKQWQATWQDENSSTSKNE 264


>Glyma01g41320.1 
          Length = 215

 Score =  286 bits (733), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 156/254 (61%), Positives = 179/254 (70%), Gaps = 41/254 (16%)

Query: 8   MASFSPLTRFSATLSSSNSKPHLTQNHFFFTLRPKN--LPLSPLKWKXXXXXXXXXXXXX 65
           MASFSPLT FS T  S  SK     N F  TLR  N  L LSPLK               
Sbjct: 1   MASFSPLTNFS-TAPSPYSKIGFFHNPFI-TLRSSNALLRLSPLK--------------- 43

Query: 66  XXXVESPPEKISVGTNGXXXXXXXXXXEELKIPGGFEDPRWVAGTWDLMQFRKNGSTDWD 125
              V +  E   V T+                   FE+PRW+ GTWDL QF+ NG+TDWD
Sbjct: 44  ---VSADNE---VATSA----------------SAFEEPRWIGGTWDLKQFQINGNTDWD 81

Query: 126 AVIDAEARRRKWLQDNPESSSNENPVVFDTSIVPWWAWIKRFHLPEAERLNGRAAMIGFF 185
           AVIDAE +RRKWL DNPESS+N+NPVVF+T+I+PWWAWIKRFHLPEAE LNGRAAMIGFF
Sbjct: 82  AVIDAEVKRRKWLGDNPESSTNDNPVVFNTAIIPWWAWIKRFHLPEAELLNGRAAMIGFF 141

Query: 186 MAYLVDSLTGVGLVDQTNNFVCKTLLFIAVAGVLLIRKNEDLENLKKLFDETTFYDKQWQ 245
           MAY+VDSLTGVG+VDQ +NF CKTLLF AV+G+LL+RKNED+E LKKL++E TFYDKQWQ
Sbjct: 142 MAYVVDSLTGVGVVDQMSNFFCKTLLFTAVSGILLVRKNEDIETLKKLWEEITFYDKQWQ 201

Query: 246 ATWQDENSNTSKKE 259
           ATWQDENS+T KK+
Sbjct: 202 ATWQDENSSTPKKD 215