Miyakogusa Predicted Gene

Lj4g3v1212300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1212300.1 Non Chatacterized Hit- tr|E1ZMU7|E1ZMU7_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,30.99,0.0000004,seg,NULL,gene.g54218.t1.1
         (209 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g15760.1                                                       325   2e-89

>Glyma17g15760.1 
          Length = 787

 Score =  325 bits (833), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 160/192 (83%), Positives = 170/192 (88%)

Query: 1   MWNLVHSSWILHVNCNKRRVASIAALLSSVLHPFLFNDERMHQTDNAPGPLKWFIENLLE 60
           MWNLVHSSWILH++CNKRRVASIAALLSSVLHP +FNDE MHQTDNAPGPLKWFIENLLE
Sbjct: 116 MWNLVHSSWILHISCNKRRVASIAALLSSVLHPLVFNDENMHQTDNAPGPLKWFIENLLE 175

Query: 61  EGTKSPRTIRXXXXXXXXXXXXNPRIIRFYLKELKLLSLYGSVAFDEDFEAELGDNNDAR 120
           EG KSPRTIR            NPRII+FYLKELKLLSLYGSVAFDEDFEAEL DNNDAR
Sbjct: 176 EGIKSPRTIRLAALHLTGLWLLNPRIIKFYLKELKLLSLYGSVAFDEDFEAELADNNDAR 235

Query: 121 LEVSLLARSPDPELTEAFINTELYARVSVAVMFCKLADLACMVGSPDENAHCKAALESGK 180
           LEVS+LARSPDPELTEAFINTE+YARVSVAV+F KLADLA MVGSP+E+A+C AA ESGK
Sbjct: 236 LEVSILARSPDPELTEAFINTEVYARVSVAVLFYKLADLARMVGSPNEDANCIAAQESGK 295

Query: 181 SFLLELLDSAVG 192
           SFLLELLDS V 
Sbjct: 296 SFLLELLDSVVN 307