Miyakogusa Predicted Gene

Lj4g3v1140680.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1140680.2 tr|A4RTC1|A4RTC1_OSTLU Predicted protein
(Fragment) OS=Ostreococcus lucimarinus (strain CCE9901)
GN=,35.2,6e-17,TLD,TLDc,CUFF.48520.2
         (222 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g16510.1                                                       393   e-110

>Glyma17g16510.1 
          Length = 230

 Score =  393 bits (1009), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/223 (87%), Positives = 203/223 (91%), Gaps = 2/223 (0%)

Query: 1   MASCIPNSLSFQGRKTSPNCLFGWNIGRKGVADNKPQINYHDIDLTFSTSLVDKTFLKGK 60
           MA CIPNS S QG KT P CLFGWNIG+  V + KPQI YHDIDLTF TSLVDKTFL+GK
Sbjct: 1   MAYCIPNSPSLQGWKTGPCCLFGWNIGKNRV-NGKPQIKYHDIDLTFPTSLVDKTFLRGK 59

Query: 61  ELKCCYRATIDGFSAADFHNCCDFKGPCVIIGYTNKNFKFGAFNPEGYRSTDDYYDTFDP 120
           ELKCCYRATIDGFSA +FH CCDFKGPCVIIGYTNK+FKFGAFNPEGYRSTDDYYDTFD 
Sbjct: 60  ELKCCYRATIDGFSATNFHECCDFKGPCVIIGYTNKSFKFGAFNPEGYRSTDDYYDTFDA 119

Query: 121 FLFYWADIE-AEPIVLPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN 179
           FLFYW D E  +PI+LPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN
Sbjct: 120 FLFYWIDNETTKPIMLPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN 179

Query: 180 SGIGDLRQAKSRLGLSYAKREDGKESIFGDESRAVLQEVEVFC 222
           SGIGDLRQAKSRLGLSYAKREDGKESIFGDESRA L+EVEVFC
Sbjct: 180 SGIGDLRQAKSRLGLSYAKREDGKESIFGDESRATLEEVEVFC 222