Miyakogusa Predicted Gene

Lj4g3v1073400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1073400.1 Non Chatacterized Hit- tr|D8UBN9|D8UBN9_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,41.55,3e-19,seg,NULL; PH domain-like,NULL,CUFF.48359.1
         (208 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g35470.1                                                       359   1e-99
Glyma16g18370.1                                                       356   8e-99

>Glyma08g35470.1 
          Length = 206

 Score =  359 bits (922), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 174/208 (83%), Positives = 182/208 (87%), Gaps = 2/208 (0%)

Query: 1   MALNPQLFPNGMPVPFVNEMFVLARDGVEFEIDKIPGSGNHGGHLKTKGTIYLSNIRMVF 60
           MALNPQLFPNGMPVPFVNEMFVLARDGVEFE+DKIP SGNHGG+LKTKG +YLSNIRMVF
Sbjct: 1   MALNPQLFPNGMPVPFVNEMFVLARDGVEFEVDKIPASGNHGGNLKTKGIVYLSNIRMVF 60

Query: 61  VAKSPAGGLTAFDMPLLYTSGEKFNQPIFHCNNLSGHVEPVVPDDQHRALYSTHTFKILF 120
           VAKSP G  TAFDMPLLY  GEKFNQPIFHCNNLSGHVEPVVP+DQHRALYSTH+FKILF
Sbjct: 61  VAKSPVGHFTAFDMPLLYIHGEKFNQPIFHCNNLSGHVEPVVPNDQHRALYSTHSFKILF 120

Query: 121 KEGGCGTFIPLFFNLIASVXXXXXXXXXXXXXXXXVDPLQAAQTPVDEMMRHAYVDPNDP 180
           KEGGCGTFIPLFFNLI SV                VDPLQA+QTPVDEMMRHAYVDPNDP
Sbjct: 121 KEGGCGTFIPLFFNLITSV--RQYNQHTNMQTQNYVDPLQASQTPVDEMMRHAYVDPNDP 178

Query: 181 TRIFLQQPNADSQLRRRTYQPQEGGGHV 208
           T+IFLQQPN+DSQLRRRTYQPQ  GGHV
Sbjct: 179 TKIFLQQPNSDSQLRRRTYQPQADGGHV 206


>Glyma16g18370.1 
          Length = 206

 Score =  356 bits (914), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 172/208 (82%), Positives = 180/208 (86%), Gaps = 2/208 (0%)

Query: 1   MALNPQLFPNGMPVPFVNEMFVLARDGVEFEIDKIPGSGNHGGHLKTKGTIYLSNIRMVF 60
           MALNPQLFPNGMPVPFVNEMFVLARDGVEFE+DKIP SGNHGGHLKTKG +YLSNIRMVF
Sbjct: 1   MALNPQLFPNGMPVPFVNEMFVLARDGVEFEVDKIPASGNHGGHLKTKGIVYLSNIRMVF 60

Query: 61  VAKSPAGGLTAFDMPLLYTSGEKFNQPIFHCNNLSGHVEPVVPDDQHRALYSTHTFKILF 120
           VAKS  G  TAFDMPLLY  GEKFNQPIFHCNNLSGHVEPVVP+D+HRALYSTH+FKILF
Sbjct: 61  VAKSSVGHFTAFDMPLLYIHGEKFNQPIFHCNNLSGHVEPVVPNDEHRALYSTHSFKILF 120

Query: 121 KEGGCGTFIPLFFNLIASVXXXXXXXXXXXXXXXXVDPLQAAQTPVDEMMRHAYVDPNDP 180
           KEGGCGTFIPLFFNLI SV                VDPLQA+QTPVDEMMRHAYVDPNDP
Sbjct: 121 KEGGCGTFIPLFFNLITSV--RQYNQHANMQTQTYVDPLQASQTPVDEMMRHAYVDPNDP 178

Query: 181 TRIFLQQPNADSQLRRRTYQPQEGGGHV 208
           T+IFLQQP +DSQLRRRTYQPQ  GGHV
Sbjct: 179 TKIFLQQPTSDSQLRRRTYQPQTDGGHV 206