Miyakogusa Predicted Gene

Lj4g3v1062150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1062150.1 tr|I1N651|I1N651_SOYBN Structural maintenance of
chromosomes protein OS=Glycine max GN=Gma.41604 PE=,84.99,0,STRUCTURAL
MAINTENANCE OF CHROMOSOMES SMC4,NULL; STRUCTURAL MAINTENANCE OF
CHROMOSOMES SMC FAMILY ME,CUFF.48332.1
         (633 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g05430.1                                                      1003   0.0  
Glyma19g02680.1                                                       988   0.0  
Glyma13g18470.1                                                       143   7e-34
Glyma10g04300.1                                                       141   3e-33
Glyma09g21650.1                                                       110   6e-24
Glyma14g17770.1                                                        93   7e-19
Glyma12g36520.1                                                        72   1e-12
Glyma02g43970.1                                                        69   1e-11
Glyma13g27210.1                                                        69   2e-11
Glyma14g04930.1                                                        69   2e-11

>Glyma13g05430.1 
          Length = 1248

 Score = 1003 bits (2593), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/633 (78%), Positives = 538/633 (84%)

Query: 1    MILEKQVHLLPMLEKNVSTPEGVPRLFDLVKVQDERMKLAFFAALRNTVVAKDLDQATRI 60
            MILEKQV LLP L+KNVSTPEGVPRLFDLVKVQDERMKLAFFAALRNTVVAKDLDQATRI
Sbjct: 616  MILEKQVDLLPKLKKNVSTPEGVPRLFDLVKVQDERMKLAFFAALRNTVVAKDLDQATRI 675

Query: 61   AYGGNYEFRRVVTLDGALFEKSXXXXXXXXXXXXXXXXXSIRAASVSVEAVTNAERQLSE 120
            AYGGN EFRRVVTLDGALFE S                 SIRA SVSVE+V NAE++LS 
Sbjct: 676  AYGGNTEFRRVVTLDGALFENSGTMSGGGGKPRGGKMGTSIRATSVSVESVANAEKELSR 735

Query: 121  MADKLNAIRQRIMDAVRRYQASEKTVTALEMELAKCQKEVDSLNSQHSYIEKQLDSLKAA 180
            + DKLN IRQRIM AV+RYQASEK V ALEMELAK QKEVDSLNSQ++YIEKQLDSL+AA
Sbjct: 736  LTDKLNDIRQRIMAAVQRYQASEKAVAALEMELAKSQKEVDSLNSQYNYIEKQLDSLEAA 795

Query: 181  SQPSEDELVRLKGLTEIITAEEREIKTLTDGSKQLKEKASDLQRNIENAGGEXXXXXXXX 240
            S P EDEL RLK L +I++AEEREI  L +GSKQLKEKA +LQRN+EN GGE        
Sbjct: 796  STPQEDELDRLKELKKIVSAEEREINRLNNGSKQLKEKALELQRNLENVGGEKLKSQKSK 855

Query: 241  XXXXXXDIDKNHSEVNRLKVLIETGQKMMKKLTKGIXXXXXXXXXXXXXXXXXXXXXXXX 300
                  DID+N SE NR KV IETGQKM+KKLTKGI                        
Sbjct: 856  VQKIQSDIDRNSSETNRHKVQIETGQKMVKKLTKGIEDSKKEKDRLTEQKEKLTQAFKEI 915

Query: 301  XXXAFIVQENYKKTQEMIDKHRDVLEEAKSEHDKMKKVVEELRASEVDADFKLKDMKKAY 360
               AF+VQENYKKTQ++ID+H  VLE+AKSE++KMKKV++ELRASEVDA+FKLKDMKKAY
Sbjct: 916  EQKAFVVQENYKKTQKVIDEHMIVLEKAKSEYNKMKKVMDELRASEVDAEFKLKDMKKAY 975

Query: 361  KELEMKGKGYKKRLDELQTAICKHLEQIQVDLLDVEKLKATLDDEHLHAACDLKRACEMV 420
            KELEMKGKGYKKRLD+LQTA+ +H+EQIQ DL+D EKL+ATL DEHL+AACDLK+ACEMV
Sbjct: 976  KELEMKGKGYKKRLDDLQTALHRHIEQIQADLVDQEKLQATLADEHLNAACDLKKACEMV 1035

Query: 421  TLLEAQLKEMNPNLDSISEYRKKVALYNERVEELNTVTQERDDIKKQYDEWRKKRLDEFM 480
             LLEAQLKEMNPNLDSISEYRKKV+ YNERVEELN VTQERDDIKKQYDEWRKKRLDEFM
Sbjct: 1036 ALLEAQLKEMNPNLDSISEYRKKVSSYNERVEELNAVTQERDDIKKQYDEWRKKRLDEFM 1095

Query: 481  EGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEK 540
            EGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEK
Sbjct: 1096 EGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEK 1155

Query: 541  TLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMF 600
            TLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMF
Sbjct: 1156 TLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMF 1215

Query: 601  ELADRLVGIYKTDNCTKSITIDPRSFVVCQKAV 633
            ELADRLVGIYKTDNCTKSITI+P SFVVC+KAV
Sbjct: 1216 ELADRLVGIYKTDNCTKSITINPGSFVVCEKAV 1248


>Glyma19g02680.1 
          Length = 1228

 Score =  988 bits (2554), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/633 (77%), Positives = 533/633 (84%)

Query: 1    MILEKQVHLLPMLEKNVSTPEGVPRLFDLVKVQDERMKLAFFAALRNTVVAKDLDQATRI 60
            MILEKQV LLP L+KNV+TPEGVPRLFDLVKVQDERMKLAFFAALRNTVVAKDLDQATRI
Sbjct: 596  MILEKQVDLLPKLKKNVNTPEGVPRLFDLVKVQDERMKLAFFAALRNTVVAKDLDQATRI 655

Query: 61   AYGGNYEFRRVVTLDGALFEKSXXXXXXXXXXXXXXXXXSIRAASVSVEAVTNAERQLSE 120
            AYGGN EFRRVVTLDGALFE S                 SIRA S+S E+V NAE++LS 
Sbjct: 656  AYGGNTEFRRVVTLDGALFENSGTMSGGGSKPRGGKMGTSIRATSMSAESVANAEKELSR 715

Query: 121  MADKLNAIRQRIMDAVRRYQASEKTVTALEMELAKCQKEVDSLNSQHSYIEKQLDSLKAA 180
            + +KLN  RQRIM AV+ YQASEK V ALEMELAK QKEVDSL SQ++YIEKQLDSL+AA
Sbjct: 716  LTNKLNDFRQRIMAAVQHYQASEKAVAALEMELAKSQKEVDSLKSQYNYIEKQLDSLEAA 775

Query: 181  SQPSEDELVRLKGLTEIITAEEREIKTLTDGSKQLKEKASDLQRNIENAGGEXXXXXXXX 240
            S P EDEL R+K L +I++AEEREI  LT+GSKQLKEKA +LQRN+EN GGE        
Sbjct: 776  SMPQEDELDRMKELKKIVSAEEREINRLTNGSKQLKEKALELQRNLENVGGEKLKSQKSK 835

Query: 241  XXXXXXDIDKNHSEVNRLKVLIETGQKMMKKLTKGIXXXXXXXXXXXXXXXXXXXXXXXX 300
                  DIDK+ S +NR KV IETGQKM+KKLTKGI                        
Sbjct: 836  VQKIQSDIDKHSSGINRCKVQIETGQKMVKKLTKGIEDSKKEKDRLTEQKEKLTQAFKEI 895

Query: 301  XXXAFIVQENYKKTQEMIDKHRDVLEEAKSEHDKMKKVVEELRASEVDADFKLKDMKKAY 360
               AF+VQENYKKTQE+IDKH  VLE+AKS+++KMKKV++ELRASEVD DFKLKDMKKAY
Sbjct: 896  EQKAFVVQENYKKTQELIDKHTIVLEKAKSDYNKMKKVMDELRASEVDVDFKLKDMKKAY 955

Query: 361  KELEMKGKGYKKRLDELQTAICKHLEQIQVDLLDVEKLKATLDDEHLHAACDLKRACEMV 420
            KELEMK KGYKKRLD+LQTA+ KHLEQIQ DL+D EKL+ATLDDEHL+AACDLK+ACEMV
Sbjct: 956  KELEMKRKGYKKRLDDLQTALRKHLEQIQADLVDQEKLQATLDDEHLNAACDLKKACEMV 1015

Query: 421  TLLEAQLKEMNPNLDSISEYRKKVALYNERVEELNTVTQERDDIKKQYDEWRKKRLDEFM 480
             LLEAQLKEMNPNLDSISEYRKKV+ YNERVEELN VTQERDDIKKQYDEWRKKRLDEFM
Sbjct: 1016 ALLEAQLKEMNPNLDSISEYRKKVSSYNERVEELNAVTQERDDIKKQYDEWRKKRLDEFM 1075

Query: 481  EGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEK 540
            EGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEK
Sbjct: 1076 EGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEK 1135

Query: 541  TLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMF 600
            TLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMF
Sbjct: 1136 TLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMF 1195

Query: 601  ELADRLVGIYKTDNCTKSITIDPRSFVVCQKAV 633
            ELADRLVGIYKTDNCTKSITI+P SFV+C+KA 
Sbjct: 1196 ELADRLVGIYKTDNCTKSITINPGSFVICEKAA 1228


>Glyma13g18470.1 
          Length = 1266

 Score =  143 bits (360), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 136/221 (61%), Gaps = 25/221 (11%)

Query: 425  AQLKEMNPNLDSISEYRKKVALYNERV--EELNTVTQERDDIKKQYDEWRKKRLDEFMEG 482
            ++++   PNL ++ +Y  +  L  ERV  EE   V +E  +  ++++E +++R   FM+ 
Sbjct: 1041 SEIERTAPNLKALDQY--EALLEKERVVTEEFEAVRKEEREKTQRFNEVKQRRYHLFMDA 1098

Query: 483  FNAISLKLKEMYQMIT------LGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLS 536
            F  IS  + ++Y+ +T      LGG A L L +  DPF  G+ ++  PP K ++++  LS
Sbjct: 1099 FTHISGNIDKIYKQLTKSNTHPLGGTAYLNLENDDDPFLHGIKYTAMPPTKRFRDMEQLS 1158

Query: 537  GGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDR-------TKDA- 588
            GGEKT+++LAL+F++H YKP+P +++DE+DAALD  NV+ V  +++ +       ++DA 
Sbjct: 1159 GGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGARTSQDAD 1218

Query: 589  -----QFIIISLRNNMFELADRLVGIYKTD--NCTKSITID 622
                 Q I+ISL++  ++ A+ LVG+Y+     C++++T D
Sbjct: 1219 GGNGFQSIVISLKDTFYDKAEALVGVYRDSERGCSRTLTFD 1259


>Glyma10g04300.1 
          Length = 1283

 Score =  141 bits (355), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 135/226 (59%), Gaps = 25/226 (11%)

Query: 420  VTLLEAQLKEMNPNLDSISEYRKKVALYNER--VEELNTVTQERDDIKKQYDEWRKKRLD 477
            +  L ++++   PNL ++ +Y  +  L  ER   EE   V +E  +  ++++E +++R  
Sbjct: 1053 IDALISEIERTAPNLKALDQY--EALLEKERAVTEEFEAVRKEEREKTQRFNEVKQRRYH 1110

Query: 478  EFMEGFNAISLKLKEMYQMIT------LGGDAELELVDSLDPFSEGVVFSVRPPKKSWKN 531
             FM+ F  IS  + ++Y+ +T      LGG A L L +  DPF  G+ ++  PP K +++
Sbjct: 1111 LFMDAFTHISGNIDKIYKQLTKSNTHPLGGTAYLNLENDDDPFLHGIKYTAMPPTKRFRD 1170

Query: 532  IANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA--- 588
            +  LSGGEKT+++LAL+F++H YKP+P +++DE+DAALD  NV+ V  +++ ++ +    
Sbjct: 1171 MEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGARI 1230

Query: 589  ----------QFIIISLRNNMFELADRLVGIYKTD--NCTKSITID 622
                      Q I+ISL++  ++ A+ LVG+Y+     C++++T D
Sbjct: 1231 SQDVDGGNGFQSIVISLKDTFYDKAEALVGVYRDSERGCSRTLTFD 1276


>Glyma09g21650.1 
          Length = 169

 Score =  110 bits (274), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 58/73 (79%)

Query: 1   MILEKQVHLLPMLEKNVSTPEGVPRLFDLVKVQDERMKLAFFAALRNTVVAKDLDQATRI 60
           M LEKQV LL  L+KNVSTPEGVPRLFDLVKVQDERMKLAFFAALRNTVVAKDLDQ   I
Sbjct: 82  MFLEKQVDLLSKLKKNVSTPEGVPRLFDLVKVQDERMKLAFFAALRNTVVAKDLDQGILI 141

Query: 61  AYGGNYEFRRVVT 73
            Y     F+  VT
Sbjct: 142 IYACMMGFKEQVT 154


>Glyma14g17770.1 
          Length = 300

 Score = 93.2 bits (230), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 44/49 (89%), Positives = 46/49 (93%)

Query: 1   MILEKQVHLLPMLEKNVSTPEGVPRLFDLVKVQDERMKLAFFAALRNTV 49
           MILEKQV LLP L+KNVSTPEGVPR FDLVKVQDER+KLAFFAALRNTV
Sbjct: 194 MILEKQVDLLPKLKKNVSTPEGVPRFFDLVKVQDERIKLAFFAALRNTV 242


>Glyma12g36520.1 
          Length = 1171

 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 9/164 (5%)

Query: 447  YNERVEELNTVTQERDDIKKQYDEWRKKRLDEFMEGFNAISLKLKEMYQMITLGGDAELE 506
            YN+ + + N +  ++  IK   +E  +K+ +     +  ++     ++ M+  G  A+LE
Sbjct: 991  YNDLMSKKNIIENDKSKIKMVIEELDEKKKETLNVTWIKVNNDFGSIFSMLLPGTMAKLE 1050

Query: 507  LVDS---LDPFSEGVVFSVRPPKKSWK-NIANLSGGEKTLSSLALVFALHHYKPTPLYVM 562
              +    LD     V F        WK +++ LSGG+++L +L+L+ AL  +KP PLY++
Sbjct: 1051 PPEGCSFLDGLEVRVAFG-----SVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYIL 1105

Query: 563  DEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRL 606
            DE+DAALD  +   +G  +K     +QFI++SL+  MF  A+ L
Sbjct: 1106 DEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVL 1149


>Glyma02g43970.1 
          Length = 1176

 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 35/175 (20%)

Query: 474  KRLDEFME-GFNAISLKLKEMYQMITLGGDAELELVDSL--------------DPFSEG- 517
            +R DE +E  F  ++   +E++  + LGG   L ++                 +   EG 
Sbjct: 984  QRKDESIERTFKGVARHFREVFSELVLGGHGHLVMMKKKDGDHDDDEDEDGPREANPEGR 1043

Query: 518  ------------VVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEI 565
                        V F+ +   +S K    LSGG+KT+ +L L+FA+    P P Y+ DEI
Sbjct: 1044 VEKYIGVKVKASVSFTGQGETQSMKQ---LSGGQKTVVALTLIFAIQRCDPAPFYLFDEI 1100

Query: 566  DAALDFKNVSIVGHYVKDRTKD---AQFIIISLRNNMFELADRLVGIYKTDNCTK 617
            DAALD +  + VG+ ++ R  D    QFI  + R  + ++AD++ G+   +  ++
Sbjct: 1101 DAALDPQYRTAVGNMIR-RLADIANTQFITTTFRPELVKVADKIYGVTHKNRVSR 1154


>Glyma13g27210.1 
          Length = 1171

 Score = 68.9 bits (167), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 9/164 (5%)

Query: 447  YNERVEELNTVTQERDDIKKQYDEWRKKRLDEFMEGFNAISLKLKEMYQMITLGGDAELE 506
            YN+ + +   +  ++  IKK  +E  +K+ +     +  ++     ++  +  G  A+LE
Sbjct: 991  YNDLMSKKYIIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTLLPGTMAKLE 1050

Query: 507  LVDS---LDPFSEGVVFSVRPPKKSWK-NIANLSGGEKTLSSLALVFALHHYKPTPLYVM 562
              +    LD     V F        WK +++ LSGG+++L +L+L+ AL  +KP PLY++
Sbjct: 1051 PPEGCSFLDGLEVRVAFG-----SVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYIL 1105

Query: 563  DEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRL 606
            DE+DAALD  +   +G  +K     +QFI++SL+  MF  A+ L
Sbjct: 1106 DEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVL 1149


>Glyma14g04930.1 
          Length = 1216

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 7/103 (6%)

Query: 518  VVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIV 577
            V F+ +   +S K    LSGG+KT+ +L L+FA+    P P Y+ DEIDAALD +  + V
Sbjct: 1095 VSFTGQGETQSMKQ---LSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV 1151

Query: 578  GHYVKDRTKD---AQFIIISLRNNMFELADRLVGIYKTDNCTK 617
            G+ ++ R  D    QFI  + R  + ++AD++ G+   +  ++
Sbjct: 1152 GNMIR-RLADIANTQFITTTFRPELVKVADKIYGVTHKNRVSR 1193