Miyakogusa Predicted Gene

Lj4g3v1062130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1062130.1 Non Chatacterized Hit- tr|I1L4N8|I1L4N8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38496
PE,74.56,0,TRANSCRIPTION INITIATION FACTOR IA (RRN3),RNA polymerase I
specific transcription initiation factor ,CUFF.48341.1
         (556 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g32870.2                                                       848   0.0  
Glyma09g32870.1                                                       848   0.0  
Glyma16g21590.2                                                       847   0.0  
Glyma16g21590.1                                                       847   0.0  

>Glyma09g32870.2 
          Length = 634

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/562 (74%), Positives = 479/562 (85%), Gaps = 23/562 (4%)

Query: 1   MGMVPIGDKEEYPTPMENPQLSDLQLVYHVRDALVAVTLGERENYDDLVGCLFRPLNWTL 60
           MG V + DKEE+ + MEN   SD QLV+H R  LVAVT G+RENYD+LVG L        
Sbjct: 1   MGRVQVSDKEEF-SQMENNDFSDSQLVHHFRGVLVAVTTGDRENYDELVGYLH------- 52

Query: 61  KKKHLNEDEIALVVTTLNALAGAVSYIDFSHHNALLSAVSSMSLWDYGTNVMDALTELIV 120
            KKHLN DE+A++VTTL AL+GAVSYID  HH +LL AVS MSLW+ G ++MDAL ELI+
Sbjct: 53  PKKHLNPDEVAILVTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNCGIDIMDALLELII 112

Query: 121 SLASTNVKYMDLCLEMLVENFIPPNMKYFL--SLR--NGLDRKNKVLARVHTALEQIAEL 176
           SLA +N KY+D CLEMLV+NF+PP   ++L  SLR  NG+DRKNKVL+RVH AL++IA+L
Sbjct: 113 SLAVSNGKYIDWCLEMLVKNFVPP---FYLLDSLRQENGIDRKNKVLSRVHAALKEIADL 169

Query: 177 VPLAPLRLSKIVLQKMPNVFSGEHMIVMYVENMLRLESGSIGETFGGAMLPALVDRLIQL 236
           VPLAPLRLS IV+QKMP+VFS E  IVMYVENMLRLESG++GET G  MLPALVDRL++L
Sbjct: 170 VPLAPLRLSPIVIQKMPSVFSKETEIVMYVENMLRLESGALGETVGSTMLPALVDRLLEL 229

Query: 237 DVEIGWDGIMQEDAKGIFEMELENAAEFADENEKCDDMS------SAELLKRKNLQGNLV 290
           DVEIGWDGI+QEDAKGIFEMELE+  EF DE+E CD +       S+ELL RKNLQGNLV
Sbjct: 230 DVEIGWDGILQEDAKGIFEMELEDVTEFTDEDENCDTIPIGRKDLSSELLNRKNLQGNLV 289

Query: 291 VEKLDSLMELTFLHLETCQNNGRLAQVFNILLTSFKRTVLNAYKSKFTQFVMFYACALDP 350
           VEKLDSLM L FLHLE+CQN+GRLA+VFN LL SF+RTVLNAYKSKFTQFVMFYACALDP
Sbjct: 290 VEKLDSLMVLAFLHLESCQNSGRLAEVFNTLLASFQRTVLNAYKSKFTQFVMFYACALDP 349

Query: 351 EGCGVKFAMFLAEMFGSDVNPPINRMSAVAYLASYLSRAKFLSAALVASILQRLVDWCFN 410
           EGCGVKFAM LA+MFG D NPPI RMSAVAYLASYL+RAKFLSAALV SI+Q LVDWC+ 
Sbjct: 350 EGCGVKFAMVLADMFGGDANPPITRMSAVAYLASYLTRAKFLSAALVTSIIQSLVDWCYA 409

Query: 411 YCKLHDFDMNPQAHQVFYSGCQAIMYVLCFRMRSLVDIPRLKLQLHNMPMEPIWKHKLSP 470
           YCK  DFDMNP+AHQVFYSGCQAIMY++CFRMRSL+D+PRLKLQL NMPME I KHKLSP
Sbjct: 410 YCKFRDFDMNPRAHQVFYSGCQAIMYIMCFRMRSLMDVPRLKLQLLNMPMEAILKHKLSP 469

Query: 471 LKVCLPTVVEEFLRQAKAAQLFMSSSETFVFNDLLESDDLSRSFGGMDRLDMFFPFDPCL 530
           LKVCLPTVV EFLRQAKAAQLFM +SE+FVF+D+LES DLS++FGGMDRLDMFFPFDPCL
Sbjct: 470 LKVCLPTVVVEFLRQAKAAQLFM-ASESFVFDDMLES-DLSKAFGGMDRLDMFFPFDPCL 527

Query: 531 LKKSESYIRPHFVRWSRVKTTY 552
           LK+SESYIRPHFVRWS+V+TTY
Sbjct: 528 LKRSESYIRPHFVRWSKVRTTY 549


>Glyma09g32870.1 
          Length = 634

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/562 (74%), Positives = 479/562 (85%), Gaps = 23/562 (4%)

Query: 1   MGMVPIGDKEEYPTPMENPQLSDLQLVYHVRDALVAVTLGERENYDDLVGCLFRPLNWTL 60
           MG V + DKEE+ + MEN   SD QLV+H R  LVAVT G+RENYD+LVG L        
Sbjct: 1   MGRVQVSDKEEF-SQMENNDFSDSQLVHHFRGVLVAVTTGDRENYDELVGYLH------- 52

Query: 61  KKKHLNEDEIALVVTTLNALAGAVSYIDFSHHNALLSAVSSMSLWDYGTNVMDALTELIV 120
            KKHLN DE+A++VTTL AL+GAVSYID  HH +LL AVS MSLW+ G ++MDAL ELI+
Sbjct: 53  PKKHLNPDEVAILVTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNCGIDIMDALLELII 112

Query: 121 SLASTNVKYMDLCLEMLVENFIPPNMKYFL--SLR--NGLDRKNKVLARVHTALEQIAEL 176
           SLA +N KY+D CLEMLV+NF+PP   ++L  SLR  NG+DRKNKVL+RVH AL++IA+L
Sbjct: 113 SLAVSNGKYIDWCLEMLVKNFVPP---FYLLDSLRQENGIDRKNKVLSRVHAALKEIADL 169

Query: 177 VPLAPLRLSKIVLQKMPNVFSGEHMIVMYVENMLRLESGSIGETFGGAMLPALVDRLIQL 236
           VPLAPLRLS IV+QKMP+VFS E  IVMYVENMLRLESG++GET G  MLPALVDRL++L
Sbjct: 170 VPLAPLRLSPIVIQKMPSVFSKETEIVMYVENMLRLESGALGETVGSTMLPALVDRLLEL 229

Query: 237 DVEIGWDGIMQEDAKGIFEMELENAAEFADENEKCDDMS------SAELLKRKNLQGNLV 290
           DVEIGWDGI+QEDAKGIFEMELE+  EF DE+E CD +       S+ELL RKNLQGNLV
Sbjct: 230 DVEIGWDGILQEDAKGIFEMELEDVTEFTDEDENCDTIPIGRKDLSSELLNRKNLQGNLV 289

Query: 291 VEKLDSLMELTFLHLETCQNNGRLAQVFNILLTSFKRTVLNAYKSKFTQFVMFYACALDP 350
           VEKLDSLM L FLHLE+CQN+GRLA+VFN LL SF+RTVLNAYKSKFTQFVMFYACALDP
Sbjct: 290 VEKLDSLMVLAFLHLESCQNSGRLAEVFNTLLASFQRTVLNAYKSKFTQFVMFYACALDP 349

Query: 351 EGCGVKFAMFLAEMFGSDVNPPINRMSAVAYLASYLSRAKFLSAALVASILQRLVDWCFN 410
           EGCGVKFAM LA+MFG D NPPI RMSAVAYLASYL+RAKFLSAALV SI+Q LVDWC+ 
Sbjct: 350 EGCGVKFAMVLADMFGGDANPPITRMSAVAYLASYLTRAKFLSAALVTSIIQSLVDWCYA 409

Query: 411 YCKLHDFDMNPQAHQVFYSGCQAIMYVLCFRMRSLVDIPRLKLQLHNMPMEPIWKHKLSP 470
           YCK  DFDMNP+AHQVFYSGCQAIMY++CFRMRSL+D+PRLKLQL NMPME I KHKLSP
Sbjct: 410 YCKFRDFDMNPRAHQVFYSGCQAIMYIMCFRMRSLMDVPRLKLQLLNMPMEAILKHKLSP 469

Query: 471 LKVCLPTVVEEFLRQAKAAQLFMSSSETFVFNDLLESDDLSRSFGGMDRLDMFFPFDPCL 530
           LKVCLPTVV EFLRQAKAAQLFM +SE+FVF+D+LES DLS++FGGMDRLDMFFPFDPCL
Sbjct: 470 LKVCLPTVVVEFLRQAKAAQLFM-ASESFVFDDMLES-DLSKAFGGMDRLDMFFPFDPCL 527

Query: 531 LKKSESYIRPHFVRWSRVKTTY 552
           LK+SESYIRPHFVRWS+V+TTY
Sbjct: 528 LKRSESYIRPHFVRWSKVRTTY 549


>Glyma16g21590.2 
          Length = 627

 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/556 (75%), Positives = 480/556 (86%), Gaps = 17/556 (3%)

Query: 1   MGMVPIGDKEEYPTPMENPQLSDLQLVYHVRDALVAVTLGERENYDDLVGCLFRPLNWTL 60
           MG V + +KEE+ + MEN   SD QLV H R  LVAVT G+RENYD+LVG L        
Sbjct: 1   MGRVQVNNKEEF-SQMENDDFSDSQLVRHFRGVLVAVTTGDRENYDELVGYLH------- 52

Query: 61  KKKHLNEDEIALVVTTLNALAGAVSYIDFSHHNALLSAVSSMSLWDYGTNVMDALTELIV 120
            KK+LN DE+A++VTTL AL+GAVSYID  HH +LL AVS MSLW+YG ++MDAL ELI+
Sbjct: 53  PKKNLNPDEVAILVTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNYGIDIMDALLELII 112

Query: 121 SLASTNVKYMDLCLEMLVENFIPPNMKYFL--SLR--NGLDRKNKVLARVHTALEQIAEL 176
           SLA++N KY+D CLEMLV++F+PP   ++L  SLR  NG+DRKNKVL+RVH AL++IA+L
Sbjct: 113 SLAASNGKYIDWCLEMLVKHFVPP---FYLLDSLRQENGIDRKNKVLSRVHAALKEIADL 169

Query: 177 VPLAPLRLSKIVLQKMPNVFSGEHMIVMYVENMLRLESGSIGETFGGAMLPALVDRLIQL 236
           VPLAPLRLS IV+QKMP+VFS E  IVMYVENMLRLESG+IGET G  MLPALVDRL++L
Sbjct: 170 VPLAPLRLSPIVIQKMPSVFSKETEIVMYVENMLRLESGAIGETVGSIMLPALVDRLLEL 229

Query: 237 DVEIGWDGIMQEDAKGIFEMELENAAEFADENEKCDDMSSAELLKRKNLQGNLVVEKLDS 296
           DVEIGWDGI+QEDAKGIFEMELE+  EFADE+E CD M  +ELL RKNLQGNLVVEKLDS
Sbjct: 230 DVEIGWDGILQEDAKGIFEMELEDVTEFADEDENCDSMPPSELLNRKNLQGNLVVEKLDS 289

Query: 297 LMELTFLHLETCQNNGRLAQVFNILLTSFKRTVLNAYKSKFTQFVMFYACALDPEGCGVK 356
           LM L FLHLE+CQ++GRL +VF+ LL SF+RTVLNAYKSKFTQ+VMFYACALDPEGCGVK
Sbjct: 290 LMVLAFLHLESCQSSGRLTEVFDTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVK 349

Query: 357 FAMFLAEMFGSDVNPPINRMSAVAYLASYLSRAKFLSAALVASILQRLVDWCFNYCKLHD 416
           FAM LA+MFG DVNPPI RMSA AYLASYL+RAKFLSAALV +I+Q LVDWC+ YCKL D
Sbjct: 350 FAMVLADMFGCDVNPPITRMSAAAYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKLRD 409

Query: 417 FDMNPQAHQVFYSGCQAIMYVLCFRMRSLVDIPRLKLQLHNMPMEPIWKHKLSPLKVCLP 476
           FDMNP+AHQVFYSGCQAIMY+LCFRMRSL+DIPRLKLQL NMPME I KHKLSPLKVCLP
Sbjct: 410 FDMNPRAHQVFYSGCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHKLSPLKVCLP 469

Query: 477 TVVEEFLRQAKAAQLFMSSSETFVFNDLLESDDLSRSFGGMDRLDMFFPFDPCLLKKSES 536
           TVV EFLRQAKAAQLFM +SE+FVF+D+LES DLS++FGG+DRLDMFFPFDPCLLKKSES
Sbjct: 470 TVVVEFLRQAKAAQLFM-ASESFVFDDMLES-DLSKAFGGIDRLDMFFPFDPCLLKKSES 527

Query: 537 YIRPHFVRWSRVKTTY 552
           YIRPHFVRWS+V+TTY
Sbjct: 528 YIRPHFVRWSKVRTTY 543


>Glyma16g21590.1 
          Length = 627

 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/556 (75%), Positives = 480/556 (86%), Gaps = 17/556 (3%)

Query: 1   MGMVPIGDKEEYPTPMENPQLSDLQLVYHVRDALVAVTLGERENYDDLVGCLFRPLNWTL 60
           MG V + +KEE+ + MEN   SD QLV H R  LVAVT G+RENYD+LVG L        
Sbjct: 1   MGRVQVNNKEEF-SQMENDDFSDSQLVRHFRGVLVAVTTGDRENYDELVGYLH------- 52

Query: 61  KKKHLNEDEIALVVTTLNALAGAVSYIDFSHHNALLSAVSSMSLWDYGTNVMDALTELIV 120
            KK+LN DE+A++VTTL AL+GAVSYID  HH +LL AVS MSLW+YG ++MDAL ELI+
Sbjct: 53  PKKNLNPDEVAILVTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNYGIDIMDALLELII 112

Query: 121 SLASTNVKYMDLCLEMLVENFIPPNMKYFL--SLR--NGLDRKNKVLARVHTALEQIAEL 176
           SLA++N KY+D CLEMLV++F+PP   ++L  SLR  NG+DRKNKVL+RVH AL++IA+L
Sbjct: 113 SLAASNGKYIDWCLEMLVKHFVPP---FYLLDSLRQENGIDRKNKVLSRVHAALKEIADL 169

Query: 177 VPLAPLRLSKIVLQKMPNVFSGEHMIVMYVENMLRLESGSIGETFGGAMLPALVDRLIQL 236
           VPLAPLRLS IV+QKMP+VFS E  IVMYVENMLRLESG+IGET G  MLPALVDRL++L
Sbjct: 170 VPLAPLRLSPIVIQKMPSVFSKETEIVMYVENMLRLESGAIGETVGSIMLPALVDRLLEL 229

Query: 237 DVEIGWDGIMQEDAKGIFEMELENAAEFADENEKCDDMSSAELLKRKNLQGNLVVEKLDS 296
           DVEIGWDGI+QEDAKGIFEMELE+  EFADE+E CD M  +ELL RKNLQGNLVVEKLDS
Sbjct: 230 DVEIGWDGILQEDAKGIFEMELEDVTEFADEDENCDSMPPSELLNRKNLQGNLVVEKLDS 289

Query: 297 LMELTFLHLETCQNNGRLAQVFNILLTSFKRTVLNAYKSKFTQFVMFYACALDPEGCGVK 356
           LM L FLHLE+CQ++GRL +VF+ LL SF+RTVLNAYKSKFTQ+VMFYACALDPEGCGVK
Sbjct: 290 LMVLAFLHLESCQSSGRLTEVFDTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVK 349

Query: 357 FAMFLAEMFGSDVNPPINRMSAVAYLASYLSRAKFLSAALVASILQRLVDWCFNYCKLHD 416
           FAM LA+MFG DVNPPI RMSA AYLASYL+RAKFLSAALV +I+Q LVDWC+ YCKL D
Sbjct: 350 FAMVLADMFGCDVNPPITRMSAAAYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKLRD 409

Query: 417 FDMNPQAHQVFYSGCQAIMYVLCFRMRSLVDIPRLKLQLHNMPMEPIWKHKLSPLKVCLP 476
           FDMNP+AHQVFYSGCQAIMY+LCFRMRSL+DIPRLKLQL NMPME I KHKLSPLKVCLP
Sbjct: 410 FDMNPRAHQVFYSGCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHKLSPLKVCLP 469

Query: 477 TVVEEFLRQAKAAQLFMSSSETFVFNDLLESDDLSRSFGGMDRLDMFFPFDPCLLKKSES 536
           TVV EFLRQAKAAQLFM +SE+FVF+D+LES DLS++FGG+DRLDMFFPFDPCLLKKSES
Sbjct: 470 TVVVEFLRQAKAAQLFM-ASESFVFDDMLES-DLSKAFGGIDRLDMFFPFDPCLLKKSES 527

Query: 537 YIRPHFVRWSRVKTTY 552
           YIRPHFVRWS+V+TTY
Sbjct: 528 YIRPHFVRWSKVRTTY 543