Miyakogusa Predicted Gene
- Lj4g3v1061080.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1061080.2 Non Chatacterized Hit- tr|D3BS35|D3BS35_POLPA
Putative nucleolar protein OS=Polysphondylium
pallidum,41.89,3e-18,SUBFAMILY NOT NAMED,NULL; NOP2(YEAST)-RELATED
NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING,NULL; no descript,CUFF.48326.2
(390 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g05280.1 692 0.0
Glyma15g20610.1 169 4e-42
Glyma12g15980.1 163 3e-40
Glyma06g12660.1 132 8e-31
Glyma12g06720.1 130 4e-30
Glyma14g25330.1 75 1e-13
Glyma08g14220.1 59 1e-08
Glyma11g38000.2 55 2e-07
Glyma11g38000.1 55 2e-07
>Glyma02g05280.1
Length = 392
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/389 (85%), Positives = 349/389 (89%)
Query: 2 EHAAKAPLPEAFLHFLEANGLDPSIYTAVDSTPRYIRLKPGXXXXXXXXXXXXXXXXXXX 61
EHAAKAPLP+AFL FLE NGLDPSIYTA+DSTPRYIRLKPG
Sbjct: 4 EHAAKAPLPDAFLQFLETNGLDPSIYTAIDSTPRYIRLKPGFESCIEEVEAEVKCKLEKL 63
Query: 62 XWLPGFYSLPPHVHIAGSKPYKEGKIYGIDASSGAAVMALDISPGDHVLDLCAAPGAKLC 121
WLPGFYSLPPHV IAGS+ Y+EGKIYGIDA+SGAAVMAL+ISPGDHVLDLCAAPGAKLC
Sbjct: 64 EWLPGFYSLPPHVQIAGSRAYREGKIYGIDAASGAAVMALNISPGDHVLDLCAAPGAKLC 123
Query: 122 MILDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTAFSVIPQGFCSDSK 181
MILDLLGDSGSV GVD ARHRLAACRTMLQKY +G RCRLFVADGTAFSVIP GFCSD K
Sbjct: 124 MILDLLGDSGSVAGVDVARHRLAACRTMLQKYMIGGRCRLFVADGTAFSVIPSGFCSDCK 183
Query: 182 SCESGLEERMDVFKEWTSRRPWKERKRANQSGTPQLVSRSQPPELIYYGQHSGVIGLTKG 241
SCESGLE R+DVFKEWTSRRPWKERK+AN+SGT QLVSRSQPPELIYYGQHSGV+GLTKG
Sbjct: 184 SCESGLEGRVDVFKEWTSRRPWKERKKANKSGTAQLVSRSQPPELIYYGQHSGVVGLTKG 243
Query: 242 ELYKTVSDNEIASHGYDKVLVDAECTHDGSVKHIQKFEHWGWLTLQRRLLDAERTDNLHA 301
ELY+T+SDNEIA+HGYDKVLVDAECTHDGSVKHIQKFE WGW TLQRR+LDAERTD+LH
Sbjct: 244 ELYRTLSDNEIANHGYDKVLVDAECTHDGSVKHIQKFEDWGWGTLQRRVLDAERTDDLHT 303
Query: 302 LQLNLLTNGFRLLKVGGSLVYSTCSLTVAQNEDVVEQFLKENVTAELMEIDVARNWPCKG 361
LQLNLLTNGFRLLKVGGSLVYSTCSLT+AQNEDVVEQFLKEN TAEL EID A +WPCKG
Sbjct: 304 LQLNLLTNGFRLLKVGGSLVYSTCSLTIAQNEDVVEQFLKENETAELTEIDAASDWPCKG 363
Query: 362 GRIPKTWRFDSLTSQTSGLFVAKFTKVVI 390
GRIPKTWRFD LTSQTSGLFVAKFTKVVI
Sbjct: 364 GRIPKTWRFDPLTSQTSGLFVAKFTKVVI 392
>Glyma15g20610.1
Length = 178
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 114/217 (52%), Gaps = 47/217 (21%)
Query: 2 EHAAKAPLPEAFLHFLEANGLDPSIYTAVDSTPRYIRLKPGXXXXXXXXXXXXXXXXXXX 61
EH KAPLP+AFL FLE NGLDPSIYTA+DSTPRYI LK G
Sbjct: 4 EHVTKAPLPDAFLQFLETNGLDPSIYTAIDSTPRYILLKLGFESCIEEVEAEVKCKLEKL 63
Query: 62 XWLPGFYSLPPHVHIAGSKPYKEGKIYGIDASSGAAVMALDISPGDHVLDLCAAPGAKLC 121
WL GFY LPPHV IAGS+ Y+EGKIY ID + GA VMAL+ C+ P
Sbjct: 64 EWLLGFYFLPPHVQIAGSRAYREGKIYRIDVAFGAVVMALNTWGS------CSRP----- 112
Query: 122 MILDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTAFSVIPQGFC---- 177
C ML F+ + T ++I Q F
Sbjct: 113 ----------------------VCCSWML----------FFLVERTTLNLIYQHFQLFLK 140
Query: 178 SDSKSCESGLEERMDVFKEWTSRRPWKERKRANQSGT 214
S CESGLE ++DVFKEWTSRRPWKERK+AN+SGT
Sbjct: 141 WSSLKCESGLEGKVDVFKEWTSRRPWKERKKANKSGT 177
>Glyma12g15980.1
Length = 181
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 113/213 (53%), Gaps = 55/213 (25%)
Query: 2 EHAAKAPLPEAFLHFLEANGLDPSIYTAVDSTPRYIRLKPGXXXXXXXXXXXXXXXXXXX 61
EHA K PLP+AFL FLE NGLDPSIYTA+DSTPRYIRLKPG
Sbjct: 4 EHATKVPLPDAFLQFLETNGLDPSIYTAIDSTPRYIRLKPG-------------FESCIE 50
Query: 62 XWLPGFYSLPPHVHIAGSKPYKEGKIYGIDASSGAAVMALDISPGDHVLDLCAAPGAKLC 121
WL GFY LPPHV IAGS+ Y+EGKIYGIDA+ GA VMAL+ C+ P
Sbjct: 51 EWLLGFYFLPPHVQIAGSRAYREGKIYGIDAAFGAVVMALN------TWGSCSRPVCYSW 104
Query: 122 MILDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTAFSVIPQGFCSDSK 181
M+ L V V H + ++V
Sbjct: 105 MLFFLHFQLFLVDFVLTTNHVIG----------------VYVV----------------- 131
Query: 182 SCESGLEERMDVFKEWTSRRPWKERKRANQSGT 214
SGLE R+DVFKEWTSRRPWKERK+AN+SGT
Sbjct: 132 ---SGLEGRVDVFKEWTSRRPWKERKKANKSGT 161
>Glyma06g12660.1
Length = 170
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 72/101 (71%), Gaps = 13/101 (12%)
Query: 2 EHAAKAPLPEAFLHFLEANGLDPSIYTAVDSTPRYIRLKPGXXXXXXXXXXXXXXXXXXX 61
EHA KAPLP+AFL FLE NGLDPSIYTA+DSTPRYIRLKPG
Sbjct: 4 EHATKAPLPDAFLQFLETNGLDPSIYTAIDSTPRYIRLKPG-------------FESCIE 50
Query: 62 XWLPGFYSLPPHVHIAGSKPYKEGKIYGIDASSGAAVMALD 102
WL GFY LPPHV IAGS+ Y+EGKIYGIDA+ GA VMAL+
Sbjct: 51 EWLLGFYFLPPHVQIAGSRAYREGKIYGIDAAFGAVVMALN 91
>Glyma12g06720.1
Length = 166
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 71/101 (70%), Gaps = 11/101 (10%)
Query: 2 EHAAKAPLPEAFLHFLEANGLDPSIYTAVDSTPRYIRLKPGXXXXXXXXXXXXXXXXXXX 61
EHA KAPLP+AFL FLE NGLDPSIYTA+DSTPRYIRLKP
Sbjct: 4 EHATKAPLPDAFLQFLETNGLDPSIYTAIDSTPRYIRLKP-----------EVKCKLEKL 52
Query: 62 XWLPGFYSLPPHVHIAGSKPYKEGKIYGIDASSGAAVMALD 102
WL GFY LPPHV IAGS+ Y+EGKIYGIDA+ GA VMAL+
Sbjct: 53 EWLLGFYFLPPHVQIAGSRAYREGKIYGIDAAFGAVVMALN 93
>Glyma14g25330.1
Length = 88
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 36/41 (87%)
Query: 2 EHAAKAPLPEAFLHFLEANGLDPSIYTAVDSTPRYIRLKPG 42
EHA KAPL +AFL FLE NGLDPSIYTA+DSTPRYIRLK G
Sbjct: 1 EHAVKAPLSDAFLQFLETNGLDPSIYTAIDSTPRYIRLKSG 41
>Glyma08g14220.1
Length = 820
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 249 DNEIASHGYDKVLVDAECTHDGSVKHIQKFEHWGWLTLQRRLLDAERTDNLHALQLNLLT 308
DN I+ +D+VL D C+ DG+++ W R + LH+LQ+ +
Sbjct: 267 DNNISQLLFDRVLCDVPCSGDGTLRKAPDL----W-----RKWNTGMGHGLHSLQVLIAM 317
Query: 309 NGFRLLKVGGSLVYSTCSLTVAQNEDVVEQFLK 341
G LLK+GG +VYSTCS+ +NE VV + L+
Sbjct: 318 RGLSLLKIGGRMVYSTCSMNPIENEAVVAEVLR 350
>Glyma11g38000.2
Length = 707
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 257 YDKVLVDAECTHDGSVKHIQKFEHWGWLTLQRRLLDAERTDNLHALQLNLLTNGFRLLKV 316
+D+VL D C+ DG+++ W R + + LH LQ+ + G LLKV
Sbjct: 238 FDRVLCDVPCSGDGTLRKAPDL----W-----RKWNTGTGNGLHNLQVLIAMRGVSLLKV 288
Query: 317 GGSLVYSTCSLTVAQNEDVVEQFLK 341
GG ++YSTCS+ +NE VV + L+
Sbjct: 289 GGKMIYSTCSMNPIENEAVVAEVLR 313
>Glyma11g38000.1
Length = 780
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 257 YDKVLVDAECTHDGSVKHIQKFEHWGWLTLQRRLLDAERTDNLHALQLNLLTNGFRLLKV 316
+D+VL D C+ DG+++ W R + + LH LQ+ + G LLKV
Sbjct: 238 FDRVLCDVPCSGDGTLRKAPDL----W-----RKWNTGTGNGLHNLQVLIAMRGVSLLKV 288
Query: 317 GGSLVYSTCSLTVAQNEDVVEQFLK 341
GG ++YSTCS+ +NE VV + L+
Sbjct: 289 GGKMIYSTCSMNPIENEAVVAEVLR 313