Miyakogusa Predicted Gene

Lj4g3v1037670.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1037670.1 Non Chatacterized Hit- tr|B8BJ41|B8BJ41_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,47.13,0.0000000000001,Med4,Mediator complex, subunit Med4;
seg,NULL,CUFF.48379.1
         (401 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g39660.1                                                       456   e-128
Glyma06g20060.1                                                       447   e-126
Glyma13g04800.1                                                       446   e-125

>Glyma08g39660.1 
          Length = 388

 Score =  456 bits (1172), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/379 (66%), Positives = 273/379 (72%), Gaps = 13/379 (3%)

Query: 1   MLQHQIVQSPARLGLXXXXXXXXXXXXXXXXXXXQTHNNQDRHXXXXXXXXXXXXXXXXR 60
           MLQHQIVQSPARLGL                   QTH+ QDR+                R
Sbjct: 1   MLQHQIVQSPARLGLANPNSPSIPNPTPPKLPPTQTHHPQDRNSSTPSSALLSLLPPLPR 60

Query: 61  AQAILVQMASLTSKLFEVSSNRSVWVTAFRGSIPTFLSSQAQAHXXXXXXXXXXXXKEII 120
           AQA+L QMASL SKLF+VS NRS+WVTAFRGS+PTFLSS    H            KEII
Sbjct: 61  AQALLAQMASLASKLFDVSPNRSLWVTAFRGSLPTFLSS----HSSTPLDTSPSNAKEII 116

Query: 121 SLFSTLQTQIVEAITELQEILDLQDAKQKIDREICSKDMALLGLANKLKDSERGLDILVD 180
           SLF+ LQTQI EA+ ELQEILDLQDAKQKIDREI S+D  LL  ANKLK++E  LDILVD
Sbjct: 117 SLFTVLQTQIFEAVAELQEILDLQDAKQKIDREIRSQDSTLLAFANKLKEAESCLDILVD 176

Query: 181 YYSDYRRSKRTKLGDGSEDDSLTSSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGQAPL 240
            YSDYRRSKR+K GD   DDS+TSSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGQAPL
Sbjct: 177 DYSDYRRSKRSKSGD---DDSMTSSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGQAPL 233

Query: 241 RGAMPPAPQDEQMRASQLYNFADLDIGLPKAVETKEKTIEAIVEPPPQQSVDTNPLANLS 300
           RGA+PPAPQ+EQMRASQLYNFADLD+GLPK VETKEK +EAIVEPPPQ  VDTN + NLS
Sbjct: 234 RGALPPAPQEEQMRASQLYNFADLDVGLPKEVETKEKIVEAIVEPPPQ--VDTNAVPNLS 291

Query: 301 AIQGLLPPNFAVPPGWKPGMPVQLPMXXXXXXXXXXXXXXXXXXXXMDSLPVPRFEEQQL 360
           A QG+LPP   +PPGWKPGMPVQL                      MDSL +PRF EQQ+
Sbjct: 292 AFQGMLPP---MPPGWKPGMPVQL-PIDLPLPPPGWKPGDPVPLPPMDSLQIPRFAEQQM 347

Query: 361 HPHIPQPKQPEVIQVQHVN 379
            PHIPQPKQPEVIQVQ VN
Sbjct: 348 QPHIPQPKQPEVIQVQPVN 366


>Glyma06g20060.1 
          Length = 388

 Score =  447 bits (1151), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 248/379 (65%), Positives = 270/379 (71%), Gaps = 13/379 (3%)

Query: 1   MLQHQIVQSPARLGLXXXXXXXXXXXXXXXXXXXQTHNNQDRHXXXXXXXXXXXXXXXXR 60
           MLQHQIVQSPA LGL                   QTH+ QDR+                R
Sbjct: 1   MLQHQIVQSPAMLGLANPNSPSIPNPTPPKLPPTQTHHPQDRNSSTPSSALLSLLPPHLR 60

Query: 61  AQAILVQMASLTSKLFEVSSNRSVWVTAFRGSIPTFLSSQAQAHXXXXXXXXXXXXKEII 120
           AQA+L QMASL SKLFEVS NRS+WVTAFRGS+PTFLSS    H            KEII
Sbjct: 61  AQALLAQMASLASKLFEVSPNRSLWVTAFRGSLPTFLSS----HSSTPLDTSPSDGKEII 116

Query: 121 SLFSTLQTQIVEAITELQEILDLQDAKQKIDREICSKDMALLGLANKLKDSERGLDILVD 180
           SLF+ LQTQI EAI ELQEILDLQDAKQKID EI S+D  LL  ANKLK++E  LDILVD
Sbjct: 117 SLFTVLQTQIFEAIAELQEILDLQDAKQKIDCEIHSQDSTLLAFANKLKEAESCLDILVD 176

Query: 181 YYSDYRRSKRTKLGDGSEDDSLTSSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGQAPL 240
            YSDY RSKR+K GD   DDS+TSST+SSQLKLSD+LSYAHRISYTTFAPPEFGAGQAPL
Sbjct: 177 DYSDYHRSKRSKSGD---DDSMTSSTISSQLKLSDMLSYAHRISYTTFAPPEFGAGQAPL 233

Query: 241 RGAMPPAPQDEQMRASQLYNFADLDIGLPKAVETKEKTIEAIVEPPPQQSVDTNPLANLS 300
           RGA+PPAPQ+EQMRASQLYNFADLD+GLPK VETKEK +EAIVEPPPQ  VDTN + NLS
Sbjct: 234 RGALPPAPQEEQMRASQLYNFADLDVGLPKEVETKEKIVEAIVEPPPQ--VDTNTVPNLS 291

Query: 301 AIQGLLPPNFAVPPGWKPGMPVQLPMXXXXXXXXXXXXXXXXXXXXMDSLPVPRFEEQQL 360
           A QG+LPP   +PPGWKPGMPVQL                      MDSL +PRF EQQ+
Sbjct: 292 AFQGMLPP---MPPGWKPGMPVQL-PIDLPLPPPGWKPGDPVPLPPMDSLQIPRFAEQQM 347

Query: 361 HPHIPQPKQPEVIQVQHVN 379
            PHIPQPKQPEVIQVQ VN
Sbjct: 348 QPHIPQPKQPEVIQVQPVN 366


>Glyma13g04800.1 
          Length = 384

 Score =  446 bits (1146), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/379 (65%), Positives = 269/379 (70%), Gaps = 17/379 (4%)

Query: 1   MLQHQIVQSPARLGLXXXXXXXXXXXXXXXXXXXQTHNNQDRHXXXXXXXXXXXXXXXXR 60
           MLQHQIV SPARLGL                      + QDR+                R
Sbjct: 1   MLQHQIVLSPARLGLANPNSPSIPNPTPPKL---PPTHTQDRNSSTPSSALLSLLPPLPR 57

Query: 61  AQAILVQMASLTSKLFEVSSNRSVWVTAFRGSIPTFLSSQAQAHXXXXXXXXXXXXKEII 120
           AQA+LVQ+ASL SKLFEVS NRS+WVTAFRGS+PTFLSS +               KEII
Sbjct: 58  AQALLVQLASLASKLFEVSPNRSLWVTAFRGSLPTFLSSHSST-----PLCASSNAKEII 112

Query: 121 SLFSTLQTQIVEAITELQEILDLQDAKQKIDREICSKDMALLGLANKLKDSERGLDILVD 180
           SLF+ LQTQI EA+ ELQEILDLQDAKQKIDREI S+D  LL  ANKLKD+E  LDILVD
Sbjct: 113 SLFTVLQTQIFEAVAELQEILDLQDAKQKIDREIHSQDSTLLSFANKLKDAESCLDILVD 172

Query: 181 YYSDYRRSKRTKLGDGSEDDSLTSSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGQAPL 240
            YSDYRRSKR K GD   DDS+TSSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGQAPL
Sbjct: 173 DYSDYRRSKRLKFGD---DDSMTSSTVSSQLKLSDILSYAHRISYTTFAPPEFGAGQAPL 229

Query: 241 RGAMPPAPQDEQMRASQLYNFADLDIGLPKAVETKEKTIEAIVEPPPQQSVDTNPLANLS 300
           RGA+PPAPQ+EQMRASQLYNFADLD+GLPK VETKEK +EAIVEPPPQ  VDTN + NLS
Sbjct: 230 RGALPPAPQEEQMRASQLYNFADLDVGLPKEVETKEKIVEAIVEPPPQ--VDTNAVPNLS 287

Query: 301 AIQGLLPPNFAVPPGWKPGMPVQLPMXXXXXXXXXXXXXXXXXXXXMDSLPVPRFEEQQL 360
           A QG+LPP   +PPGWKPGMPVQL                      MDSL +PRF EQQ+
Sbjct: 288 AFQGMLPP---MPPGWKPGMPVQL-PIDLPLPPPGWKPGDPVPLPPMDSLQIPRFAEQQI 343

Query: 361 HPHIPQPKQPEVIQVQHVN 379
            PHIPQPKQPEVIQVQ VN
Sbjct: 344 QPHIPQPKQPEVIQVQPVN 362