Miyakogusa Predicted Gene

Lj4g3v1037650.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1037650.1 tr|B9MXF8|B9MXF8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_593841 PE=4
SV=1,42.34,4e-18,SUBFAMILY NOT NAMED,NULL; AP
ENDONUCLEASE,Exodeoxyribonuclease III xth; zf-GRF,Zinc finger,
GRF-type,CUFF.48310.1
         (526 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g05430.1                                                       621   e-178
Glyma16g23850.1                                                       335   8e-92

>Glyma02g05430.1 
          Length = 566

 Score =  621 bits (1602), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 316/446 (70%), Positives = 346/446 (77%), Gaps = 63/446 (14%)

Query: 88  RWETLLHQGRRIFVVGDLNIAPFAIDRCDAGPDFENNEFRRWFKSMLIENEGRFSDVFRA 147
           RWE+LLHQGRRIFVVGDLNIAPFAIDRCDAGPDFENNEFR+WFKSMLIEN GRFSDVFRA
Sbjct: 177 RWESLLHQGRRIFVVGDLNIAPFAIDRCDAGPDFENNEFRKWFKSMLIENGGRFSDVFRA 236

Query: 148 KHPNKTEAYTCWAQNTGAEVFNFGSRIDHILCAGSCLHESDDLKCHSFIRCHVMDCDILT 207
           KHP++ EAYTCW+QNTGAEVFNFGSRIDHIL AGSCLHE DDL+CHSFIRCHV +CDILT
Sbjct: 237 KHPDRREAYTCWSQNTGAEVFNFGSRIDHILFAGSCLHELDDLQCHSFIRCHVKECDILT 296

Query: 208 EYKRCKPESTLSAHRWKGGRSIKLEGSDHAPVYMTLLEIPEVSLHSTPFLSARYVPMVHG 267
           +YKRCKPESTL   RWKGG S+KLEGSDHAPV M+L EIP+VSLHSTP LSARYVPMVHG
Sbjct: 297 QYKRCKPESTL---RWKGGHSVKLEGSDHAPVLMSLHEIPDVSLHSTPSLSARYVPMVHG 353

Query: 268 IQQTLVSMLVKRRVSEQTKSCEMVNEDISMGSTYESIEPTNQTDSSTSECHFPSSQDSVC 327
           IQQTLVS+L+KR+VSE  KSCEM  EDI+M                            V 
Sbjct: 354 IQQTLVSVLMKRQVSELMKSCEMAQEDIAM---------------------------DVS 386

Query: 328 SILESKELSRGSSQEAAISKSGSGYEKSMPRKCNESKKKARNNQGSQLSLRSFFQKSTNL 387
           SIL+  +LS GSSQE+ +SKSGS  +KS  R+CN S KKARN Q SQLSLRSFFQKSTNL
Sbjct: 387 SILKPNKLSGGSSQES-VSKSGSENKKSTTRQCNRSNKKARNGQWSQLSLRSFFQKSTNL 445

Query: 388 DNG------VNNSCTDHSNN-QAEPSQPDPHLRETSTAIDHSSSPKQCEVNTDACDLDLA 440
           D G      VN+SCTD+SNN QAEPSQP P L+E  T   H+                  
Sbjct: 446 DKGSSIKEVVNDSCTDYSNNNQAEPSQPSPRLQEIPTVCAHNG----------------- 488

Query: 441 ELNDSSRKEEKSNVASLEWQRIQQMMQNSIPLCKGHKERCIARVVKKQGSNFGRRFYVCA 500
                   +EKSNVASLEWQRI+Q+MQNSIP+CKGHKE CIARVVKKQG NFGRRFYVCA
Sbjct: 489 --------KEKSNVASLEWQRIKQLMQNSIPICKGHKEPCIARVVKKQGPNFGRRFYVCA 540

Query: 501 RAEGPASNPEANCGYFKWATSKSRNK 526
           RAEGPASNPEANCGYFKWA+SKSRNK
Sbjct: 541 RAEGPASNPEANCGYFKWASSKSRNK 566


>Glyma16g23850.1 
          Length = 482

 Score =  335 bits (859), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 214/460 (46%), Positives = 253/460 (55%), Gaps = 125/460 (27%)

Query: 81  KIFTRSC--RWETLLHQGRRIFVVGDLNIAPFAIDRCDAGPDFENNEFRRWFKSMLIENE 138
           +IF R    RW +LLHQGRRIFVV DLNIAPFAIDRCD GPDFE NE             
Sbjct: 134 QIFYRILQKRWGSLLHQGRRIFVVVDLNIAPFAIDRCDIGPDFEKNE------------- 180

Query: 139 GRFSDVFRAKHPNKTEAYTCWAQNTGAEVFNFGSRIDHILCAGSCLHESDDLKCHSFIRC 198
                   AKHP++   Y  W            + + H +     L    +L    F+  
Sbjct: 181 --------AKHPDR---YGSWKGKP--------TPVGHKIQVLKYLTSEVELIIFCFLVH 221

Query: 199 HVMDCDILTEYKRCKPESTLSAHRWKGGRSIKLEGSDHAPVYMTLLEIPEVSLH------ 252
             M+      YKRCKPESTL   RWKGGRS+KLEGSDHAPV+M+L EIP++  H      
Sbjct: 222 ANMNWTCNAIYKRCKPESTL---RWKGGRSVKLEGSDHAPVFMSLHEIPDICSHGSWHTA 278

Query: 253 STPFLSARYVPMVHGIQQTLVSMLV-KRRVSEQTKSCEMVNEDISMGSTYESIEPTNQTD 311
           ++ + +   + M   +    + ML+ KR+VS++ KS EM  EDI+M              
Sbjct: 279 NSSYKTLFLLWMRFSVHMMSLLMLLMKRQVSKKMKSFEMAQEDIAM-------------- 324

Query: 312 SSTSECHFPSSQDSVCSILESKELSRGSSQEAAISKSGSGYEKSMPRKCNESKKKARNNQ 371
                       DS C   E   L                              + +++Q
Sbjct: 325 ------------DSTCERKEPVPL------------------------------RTKSSQ 342

Query: 372 GSQLSLRSFFQKSTNLDNG-----VNNSCTDHSNNQAEPSQPDPHLRETSTAIDHSSSPK 426
            SQLSLRSFFQKS NLDNG     VN+SCTD+SNNQAEPSQP P L+ET T         
Sbjct: 343 WSQLSLRSFFQKSANLDNGSSVKVVNDSCTDYSNNQAEPSQPSPRLQETPT--------- 393

Query: 427 QCEVNTDACDLDLAELNDSSRKEEKSNVASLEWQRIQQMMQNSIPLCKGHKERCIARVVK 486
                      DLA  N SS KEE SNVASLEWQRIQQ+MQNSIP+CKG+KE CIARVVK
Sbjct: 394 -----------DLAGPNGSSTKEEMSNVASLEWQRIQQLMQNSIPICKGYKEPCIARVVK 442

Query: 487 KQGSNFGRRFYVCARAEGPASNPEANCGYFKWATSKSRNK 526
           KQG NFGRRFYVCA AEGPASN EANCGYFKWA+SKS+NK
Sbjct: 443 KQGPNFGRRFYVCAHAEGPASNLEANCGYFKWASSKSKNK 482