Miyakogusa Predicted Gene

Lj4g3v1037490.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1037490.4 tr|Q0JFE3|Q0JFE3_ORYSJ Os04g0110600 protein
OS=Oryza sativa subsp. japonica GN=Os04g0110600 PE=4
SV=,82.69,3e-18,ZF_RANBP2_2,Zinc finger, RanBP2-type; ZINC FINGER
PROTEIN,NULL; Zinc finger domain,Zinc finger, RanB,CUFF.48442.4
         (379 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g05500.1                                                       549   e-156
Glyma16g23920.1                                                       542   e-154
Glyma17g12580.1                                                        50   4e-06
Glyma18g00920.2                                                        50   4e-06
Glyma18g00920.1                                                        49   7e-06
Glyma11g36990.2                                                        49   7e-06
Glyma11g36990.1                                                        49   8e-06

>Glyma02g05500.1 
          Length = 336

 Score =  549 bits (1415), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 261/320 (81%), Positives = 279/320 (87%), Gaps = 3/320 (0%)

Query: 60  DWECSSCNNRNYAFRSFCNRCKQPRLLVDTKTPADSKWLPRIGDWICTGCTNNNYASREK 119
           DWECSSCNNRNYAFRSFCNRCKQPRLLVDTKTP+DSKWLPRIGDWICTGCTNNNYASREK
Sbjct: 20  DWECSSCNNRNYAFRSFCNRCKQPRLLVDTKTPSDSKWLPRIGDWICTGCTNNNYASREK 79

Query: 120 CKKCGQPKEVAAMPAVAMTGASFPPYPHYVSRAPGGPAQKMNIGFNGLIGNGVLPQPLHL 179
           CKKCGQPKEVAAMPA+AMTGASFPPY HY SRAPGGP QKMNIG   L+GN    Q LH 
Sbjct: 80  CKKCGQPKEVAAMPAIAMTGASFPPYSHYFSRAPGGPEQKMNIG---LLGNSAPSQSLHF 136

Query: 180 NSNWPVTGADKYGVHPVSMWLPGGNYSSGHPYVNPSSQDLSIAKGWRNGDWICNCGFHNY 239
           NSNWPV  ADKYGV P+S+WLP  NY SGHP+ N ++ +LS+ KGWRNGDWICNCGFHNY
Sbjct: 137 NSNWPVPRADKYGVQPLSIWLPSRNYGSGHPHENSTNHNLSVPKGWRNGDWICNCGFHNY 196

Query: 240 SSRSQCKKCDAFPPALGTKRLASEELVYDWDNKRLNVGTTNDRQHTFTSLEQAVGNSADP 299
           SSRSQCKKC+AFPPALGTKRLASEELVYDWDNKRLNVGTTND+Q T+TSL+  VG  ADP
Sbjct: 197 SSRSQCKKCNAFPPALGTKRLASEELVYDWDNKRLNVGTTNDQQQTYTSLDLVVGTGADP 256

Query: 300 KPGVFPSYPGINSSTAXXXXXXXXXXXXVSTPALLGKGAKQWRSGDWMCTNCNNHNYASR 359
           KPGVFPSYP +NSSTA            VSTPAL+GKGAKQWRSGDWMC+NCNNHNYASR
Sbjct: 257 KPGVFPSYPSMNSSTAPSLPLATLLPPQVSTPALIGKGAKQWRSGDWMCSNCNNHNYASR 316

Query: 360 LHCNRCKTQRVAPMQPVNVV 379
           L CNRCKTQR+APMQPVNVV
Sbjct: 317 LQCNRCKTQRMAPMQPVNVV 336


>Glyma16g23920.1 
          Length = 334

 Score =  542 bits (1396), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 257/320 (80%), Positives = 278/320 (86%), Gaps = 3/320 (0%)

Query: 60  DWECSSCNNRNYAFRSFCNRCKQPRLLVDTKTPADSKWLPRIGDWICTGCTNNNYASREK 119
           DWECSSCNNRNYAFRSFCNRCKQPRLLVD+KTPADSKWLPRIGDWICTGCTNNNYASREK
Sbjct: 18  DWECSSCNNRNYAFRSFCNRCKQPRLLVDSKTPADSKWLPRIGDWICTGCTNNNYASREK 77

Query: 120 CKKCGQPKEVAAMPAVAMTGASFPPYPHYVSRAPGGPAQKMNIGFNGLIGNGVLPQPLHL 179
           CKKCGQPKEVAAMPA+AMTGASFP Y HY SRAPG P QKMNIG   L+GNG   Q LHL
Sbjct: 78  CKKCGQPKEVAAMPAIAMTGASFPTYSHYFSRAPGVPEQKMNIG---LLGNGAPSQSLHL 134

Query: 180 NSNWPVTGADKYGVHPVSMWLPGGNYSSGHPYVNPSSQDLSIAKGWRNGDWICNCGFHNY 239
           NSNWPV GADKYGV P+S+WLPGGNY + H + N ++Q+LS+ KGWRNGDWICNCGFHNY
Sbjct: 135 NSNWPVPGADKYGVQPLSIWLPGGNYGTVHHHENSTNQNLSVPKGWRNGDWICNCGFHNY 194

Query: 240 SSRSQCKKCDAFPPALGTKRLASEELVYDWDNKRLNVGTTNDRQHTFTSLEQAVGNSADP 299
           SSRSQCKKC+AFPPALGTKRLASEELVYDWDNKRLN+GTTND+   +TSLEQ VG  ADP
Sbjct: 195 SSRSQCKKCNAFPPALGTKRLASEELVYDWDNKRLNIGTTNDQHQIYTSLEQVVGTGADP 254

Query: 300 KPGVFPSYPGINSSTAXXXXXXXXXXXXVSTPALLGKGAKQWRSGDWMCTNCNNHNYASR 359
           KPG+FPSYP +NS+TA             S PALLGKGA+QWRSGDWMC+NCNNHNYASR
Sbjct: 255 KPGLFPSYPSMNSTTAPSLPLATWLPPQASAPALLGKGARQWRSGDWMCSNCNNHNYASR 314

Query: 360 LHCNRCKTQRVAPMQPVNVV 379
           L CNRCKTQR+APMQPVNVV
Sbjct: 315 LQCNRCKTQRMAPMQPVNVV 334


>Glyma17g12580.1 
          Length = 127

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 42/160 (26%)

Query: 102 GDWICTGCTNNNYASREKCKKCGQPKEVAAMPAVAMTGASFPPYPHYVSRAPGGPAQKMN 161
           GDW+C  C + N+  RE C+ CG PK     P+          Y +  + A         
Sbjct: 6   GDWMCGVCEHINFKKREACQSCGYPKYGGHDPST---------YRYNKTEA--------- 47

Query: 162 IGFNGLIGNGVLPQPLHLNSNWPVTGADKYGVHPVSMWLPGGNYSSGHPYVNPSSQDLSI 221
                L G+       H  +    + +  Y    +  +   G Y S            + 
Sbjct: 48  -----LAGDWFCNCGAHNYA----SRSSCYRCGAIKDYYSSGEYGSD-----------TF 87

Query: 222 AKGWRNGDWIC---NCGFHNYSSRSQCKKCDAFPPALGTK 258
             GW+NGDW+C    CG HNY+SR++C KC   P  LG K
Sbjct: 88  PPGWKNGDWLCPRIGCGVHNYASRTECFKCKV-PRDLGEK 126


>Glyma18g00920.2 
          Length = 240

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 60  DWECSSCNNRNYAFRSFCN--RCKQPRLLVD-TKTPADSKWLPRIGDWICTGCTNNNYAS 116
           DW C  C N N++FR+ CN  +C  P+     +K+  +SK     G W C  C N NY  
Sbjct: 151 DWTCPKCGNVNFSFRTICNMRKCNTPKPGSQASKSDKNSKQKMPEGSWKCEKCNNINYPF 210

Query: 117 REKCKK--CG--QPKEVAAMPAVA 136
           R KC +  CG  +P E    P+ A
Sbjct: 211 RTKCNRQNCGADKPAESEKSPSPA 234


>Glyma18g00920.1 
          Length = 283

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 60  DWECSSCNNRNYAFRSFCN--RCKQPRLLVD-TKTPADSKWLPRIGDWICTGCTNNNYAS 116
           DW C  C N N++FR+ CN  +C  P+     +K+  +SK     G W C  C N NY  
Sbjct: 194 DWTCPKCGNVNFSFRTICNMRKCNTPKPGSQASKSDKNSKQKMPEGSWKCEKCNNINYPF 253

Query: 117 REKCKK--CG--QPKEVAAMPAVA 136
           R KC +  CG  +P E    P+ A
Sbjct: 254 RTKCNRQNCGADKPAESEKSPSPA 277


>Glyma11g36990.2 
          Length = 283

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 60  DWECSSCNNRNYAFRSFCN--RCKQPRLLVD-TKTPADSKWLPRIGDWICTGCTNNNYAS 116
           DW C  C N N++FR+ CN  +C  P+     +K+  +SK     G W C  C N NY  
Sbjct: 194 DWTCPKCGNVNFSFRTVCNMRKCNTPKPGSQASKSDKNSKQKMPEGSWKCEKCNNINYPF 253

Query: 117 REKCKK--CG--QPKEVAAMPAVA 136
           R KC +  CG  +P E    P+ A
Sbjct: 254 RTKCNRQNCGADKPAESEESPSSA 277


>Glyma11g36990.1 
          Length = 285

 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 60  DWECSSCNNRNYAFRSFCN--RCKQPRLLVD-TKTPADSKWLPRIGDWICTGCTNNNYAS 116
           DW C  C N N++FR+ CN  +C  P+     +K+  +SK     G W C  C N NY  
Sbjct: 196 DWTCPKCGNVNFSFRTVCNMRKCNTPKPGSQASKSDKNSKQKMPEGSWKCEKCNNINYPF 255

Query: 117 REKCKK--CG--QPKEVAAMPAVA 136
           R KC +  CG  +P E    P+ A
Sbjct: 256 RTKCNRQNCGADKPAESEESPSSA 279