Miyakogusa Predicted Gene

Lj4g3v0998960.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0998960.4 Non Chatacterized Hit- tr|J3LZW8|J3LZW8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,39.02,4e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.48259.4
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g42770.1                                                       269   1e-72
Glyma11g02690.1                                                       268   2e-72
Glyma08g01640.1                                                       239   8e-64
Glyma05g37960.1                                                       234   3e-62
Glyma14g06230.1                                                        72   2e-13
Glyma18g06670.1                                                        68   4e-12
Glyma02g43150.1                                                        66   1e-11
Glyma11g29010.1                                                        65   2e-11
Glyma18g02850.1                                                        64   5e-11
Glyma11g35570.1                                                        63   9e-11
Glyma14g37630.1                                                        60   9e-10
Glyma02g39470.2                                                        55   2e-08
Glyma02g39470.1                                                        55   2e-08
Glyma08g12300.1                                                        55   3e-08
Glyma05g29150.2                                                        52   2e-07
Glyma13g30130.1                                                        52   4e-07
Glyma05g29150.1                                                        51   4e-07
Glyma15g08990.1                                                        47   7e-06

>Glyma01g42770.1 
          Length = 677

 Score =  269 bits (687), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 127/150 (84%), Positives = 137/150 (91%), Gaps = 2/150 (1%)

Query: 1   MQCAGASPA--KSQPVVNPNHQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLA 58
           +QCAGASPA  KSQPVVNPNHQP E++ KHH +SKP WLLA+EIV GTMVGSLFLVAVLA
Sbjct: 269 IQCAGASPASAKSQPVVNPNHQPAEYVSKHHRASKPVWLLALEIVTGTMVGSLFLVAVLA 328

Query: 59  AFQRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSP 118
           AFQRCNKKS+I+IPWKKS SQKDH  VYIDPE LKDVRRYSRQ+LEVACEDFSNIIGSSP
Sbjct: 329 AFQRCNKKSSIIIPWKKSGSQKDHTAVYIDPEFLKDVRRYSRQELEVACEDFSNIIGSSP 388

Query: 119 DSVVYKGTMKGGPEIGVISLCIREEQWTGW 148
           DSVVYKGTMKGGPEI VISLCI+EE WTG+
Sbjct: 389 DSVVYKGTMKGGPEIAVISLCIKEEHWTGY 418


>Glyma11g02690.1 
          Length = 663

 Score =  268 bits (685), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 126/150 (84%), Positives = 137/150 (91%), Gaps = 2/150 (1%)

Query: 1   MQCAGASPA--KSQPVVNPNHQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLA 58
           +QCAGASPA  KSQPVVNPNHQP E++ KHH +SKP WLLA+EIV GTMVGSLFLVAVLA
Sbjct: 255 IQCAGASPASAKSQPVVNPNHQPAEYVSKHHRASKPVWLLALEIVTGTMVGSLFLVAVLA 314

Query: 59  AFQRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSP 118
           AFQRCNKKS+I+IPWKKS SQKDH  VYIDPE+LKDVRRYSRQ+LEVACEDFSNIIGSSP
Sbjct: 315 AFQRCNKKSSIIIPWKKSGSQKDHTAVYIDPELLKDVRRYSRQELEVACEDFSNIIGSSP 374

Query: 119 DSVVYKGTMKGGPEIGVISLCIREEQWTGW 148
           DSVVYKGTMKGGPEI V+SLCI EE WTG+
Sbjct: 375 DSVVYKGTMKGGPEIAVVSLCINEEHWTGY 404


>Glyma08g01640.1 
          Length = 618

 Score =  239 bits (610), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 112/149 (75%), Positives = 131/149 (87%), Gaps = 1/149 (0%)

Query: 1   MQCAGASPAKSQPVVNPNHQP-TEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAA 59
           +QCAGASPA+S PVVNP + P T+H+ KH  +SKP+WLLA+EIV GTMVGSLF++A+L+A
Sbjct: 211 VQCAGASPAQSGPVVNPRYLPATKHVTKHQEASKPAWLLALEIVTGTMVGSLFIIAILSA 270

Query: 60  FQRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPD 119
            QRCN K +I+IPWKKSAS KD+M V+ID EMLKDV  YSRQDLEVACEDFSNIIGSSPD
Sbjct: 271 IQRCNNKPSIIIPWKKSASGKDYMAVHIDSEMLKDVMSYSRQDLEVACEDFSNIIGSSPD 330

Query: 120 SVVYKGTMKGGPEIGVISLCIREEQWTGW 148
           SVVYKGTMKGGPEI VISLCI+E+ WTG+
Sbjct: 331 SVVYKGTMKGGPEIAVISLCIKEDNWTGY 359


>Glyma05g37960.1 
          Length = 656

 Score =  234 bits (596), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 112/149 (75%), Positives = 128/149 (85%), Gaps = 7/149 (4%)

Query: 1   MQCAGASPAKSQPVVNPNHQP-TEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAA 59
           +QCAGAS      VVNP +QP T+H+ KH  +SKP+WLLA+EIV GTMVGSLF++A+L A
Sbjct: 255 VQCAGAS------VVNPKYQPATKHVTKHQEASKPAWLLALEIVTGTMVGSLFIIAILTA 308

Query: 60  FQRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPD 119
            QRCN KS+I+IPWKKSAS KD+M V+ID EMLKDV RYSRQDLEVACEDFSNIIGSSPD
Sbjct: 309 IQRCNNKSSIIIPWKKSASGKDYMAVHIDSEMLKDVMRYSRQDLEVACEDFSNIIGSSPD 368

Query: 120 SVVYKGTMKGGPEIGVISLCIREEQWTGW 148
           SVVYKGTMKGGPEI VISLCIRE+ WTG+
Sbjct: 369 SVVYKGTMKGGPEIAVISLCIREDNWTGY 397


>Glyma14g06230.1 
          Length = 643

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 11/120 (9%)

Query: 32  SKPSWLLAIEIVMGTMVGSLFLVAVLAAFQRCNKKSAIVIPWKKSASQKDHMTVYIDPEM 91
           S  S +  + I+ G + G++FL+        C  K A V PW    S +      +    
Sbjct: 285 STSSKVHTVPILAGVIGGAVFLIFSSIGIYLCKTKVANVRPWAMGLSGQ------LQKAF 338

Query: 92  LKDVRRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIGVISLCIREEQWTGWQNW 151
           +   ++  R DLE ACEDFSN+IG+SP  ++YKGT+ GG EI V  + I     T  +NW
Sbjct: 339 VTGAQKLKRSDLEAACEDFSNVIGNSPIGILYKGTLSGGVEIAVAFVSI-----TSSKNW 393


>Glyma18g06670.1 
          Length = 587

 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 67/147 (45%), Gaps = 27/147 (18%)

Query: 7   SPAKSQPVVNPNHQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAFQRCNKK 66
           SPA S    N N       PK H +          I+  T+ G  FL+ V A    C + 
Sbjct: 220 SPASSSNQGNANSS----NPKQHTA----------IIWSTVGGFSFLILVSAIAFVCFRS 265

Query: 67  SAIVI--PWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDSVVYK 124
           + +V   PW    S +      +    +  V    R +LEVACEDFSNIIGS P+  +YK
Sbjct: 266 NKVVTVKPWTTGLSGQ------LQKAFVSGVPSLKRTELEVACEDFSNIIGSLPEGTIYK 319

Query: 125 GTMKGGPEIGVISLCIREEQWTGWQNW 151
           GT+  G EIGV S  +     T  QNW
Sbjct: 320 GTLSSGVEIGVASSAV-----TSSQNW 341


>Glyma02g43150.1 
          Length = 645

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 11/110 (10%)

Query: 42  IVMGTMVGSLFLVAVLAAFQRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQ 101
           I+ G + G++FL+        C  K A V PW    S +      +    +   ++  R 
Sbjct: 297 ILPGVIGGAVFLIFSSIGIYLCKTKVANVRPWATGLSGQ------LQKAFVTGAQKLRRS 350

Query: 102 DLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIGVISLCIREEQWTGWQNW 151
           DLE ACEDFSN+IG+SP   +YKGT+  G EI V  + +     T  +NW
Sbjct: 351 DLEAACEDFSNVIGTSPIGTLYKGTLSSGVEIAVAFVPV-----TSSRNW 395


>Glyma11g29010.1 
          Length = 571

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 42  IVMGTMVGSLFLVAVLAAFQRCNKKSAIVI--PWKKSASQKDHMTVYIDPEMLKDVRRYS 99
           I+  T+ G  FL+ V A    C + + +V   PW    S +      +    +  V    
Sbjct: 213 IIWSTVGGFSFLILVSAIVFACFRSNKVVTVKPWATGLSGQ------LQKAFVSGVPSLK 266

Query: 100 RQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIGVISLCIREEQ 144
           R +LEVACEDFSNIIGS P+  +YKGT+  G EI V S  +   Q
Sbjct: 267 RTELEVACEDFSNIIGSLPEGTIYKGTLSSGVEIAVASSAVTSSQ 311


>Glyma18g02850.1 
          Length = 644

 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 40  IEIVMGTMVGSLFLVAVLAAFQRC-NKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRY 98
           + I+ G M G++FL+  +     C   K A V PW    S +      +    +  V + 
Sbjct: 291 VVILAGVMGGAVFLLISIIGLYLCKTNKVATVKPWATGLSGQ------LQNAFVTGVPKL 344

Query: 99  SRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIGVISL 138
            R +LE ACEDFSN+IG+S    VYKGT+  G EI V S+
Sbjct: 345 KRSELEAACEDFSNVIGTSSIGTVYKGTLSSGVEIAVASV 384


>Glyma11g35570.1 
          Length = 594

 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 40  IEIVMGTMVGSLFLVAVLAAFQRC-NKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRY 98
           + I+ G M G +FL+  +     C   K A V PW    S +      +    +  V + 
Sbjct: 241 VVILAGVMGGVVFLLISIIGLYLCKTNKVATVKPWATGLSGQ------LQKAFVTGVPKL 294

Query: 99  SRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIGVISL 138
            R +LE ACEDFSN+IG+S    VYKGT+  G EI V S+
Sbjct: 295 KRSELEAACEDFSNVIGTSSIGTVYKGTLSSGVEIAVASV 334


>Glyma14g37630.1 
          Length = 592

 Score = 60.1 bits (144), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 18/139 (12%)

Query: 18  NHQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAA-----FQRCNKKSAIVIP 72
           N  P+     + G++  S  +   +++ + VG   L+ +L+A     FQ  ++K   V P
Sbjct: 267 NWAPSPSSFSNQGNTNSSNQIHHSVIIWSAVGGFSLLILLSAIIFACFQ--SRKVVAVKP 324

Query: 73  WKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPE 132
           W    S +      +    +K V    R ++E A E FSNIIGS PD +VYKGT+  G E
Sbjct: 325 WSTGLSGQ------LQKAFIKGVPSLKRGEIEAASEYFSNIIGSLPDGIVYKGTLSSGVE 378

Query: 133 IGVISLCIREEQWTGWQNW 151
           I V S  +     T  QNW
Sbjct: 379 IAVASSAV-----TTAQNW 392


>Glyma02g39470.2 
          Length = 482

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 19/151 (12%)

Query: 6   ASPAKSQPVVNPNHQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVA-----VLAAF 60
           +SPA + P    N  P+     + G++  S  +   +++   VG   L+      + A F
Sbjct: 92  SSPANTLPP-EFNWAPSPSPFSNQGNTDSSNQIHHSVIIWFAVGGFSLLILVSAIIFACF 150

Query: 61  QRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDS 120
           Q  ++K   V PW    S +      +    +K V    R ++E A E FSNIIGS PD 
Sbjct: 151 Q--SRKVVAVKPWSTGLSGQ------LQKAFVKGVPSLKRGEIEAASEYFSNIIGSLPDG 202

Query: 121 VVYKGTMKGGPEIGVISLCIREEQWTGWQNW 151
            VYKGT+  G EI V S  +     T  +NW
Sbjct: 203 TVYKGTLSSGVEIAVASSAV-----TTAKNW 228


>Glyma02g39470.1 
          Length = 652

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 19/151 (12%)

Query: 6   ASPAKSQPVVNPNHQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVA-----VLAAF 60
           +SPA + P    N  P+     + G++  S  +   +++   VG   L+      + A F
Sbjct: 262 SSPANTLPP-EFNWAPSPSPFSNQGNTDSSNQIHHSVIIWFAVGGFSLLILVSAIIFACF 320

Query: 61  QRCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDS 120
           Q  ++K   V PW    S +      +    +K V    R ++E A E FSNIIGS PD 
Sbjct: 321 Q--SRKVVAVKPWSTGLSGQ------LQKAFVKGVPSLKRGEIEAASEYFSNIIGSLPDG 372

Query: 121 VVYKGTMKGGPEIGVISLCIREEQWTGWQNW 151
            VYKGT+  G EI V S  +     T  +NW
Sbjct: 373 TVYKGTLSSGVEIAVASSAV-----TTAKNW 398


>Glyma08g12300.1 
          Length = 432

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 9/128 (7%)

Query: 13  PVVNPNHQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAFQRCNKKSAIVIP 72
           P V+P+          +G+S   W   I I+ G  V  + +V +L  +++  + + ++ P
Sbjct: 56  PSVSPHVNQASQQNSPNGASGKLWKYII-IITGVAVLVILVVIMLCIWRK--RAAKVIKP 112

Query: 73  WKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPE 132
           WK   S +      +    +  V + +R +LE ACEDFSNII S  +  VYKGT+  G E
Sbjct: 113 WKTGISGQ------LQKAFITGVPKLNRGELETACEDFSNIINSFDECTVYKGTLSSGVE 166

Query: 133 IGVISLCI 140
           I V S  +
Sbjct: 167 IAVDSTIV 174


>Glyma05g29150.2 
          Length = 437

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 17/139 (12%)

Query: 2   QCAGASPAKSQPVVNPNHQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAFQ 61
           Q +GA PA        N  P    P    S+ P+   ++ +++      +  V +L  ++
Sbjct: 238 QSSGAFPAVPDTNKKQNQSPA---PLPSSSNSPTCESSVAVLV------IVFVIMLCIWR 288

Query: 62  RCNKKSAIVIPWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDSV 121
           +  + + ++ PWK   S +      +    +  V + ++ +LE ACEDFSNII S  +  
Sbjct: 289 K--RAAKVIKPWKTGISGQ------LQKAFITGVPKLNQGELETACEDFSNIINSFDECT 340

Query: 122 VYKGTMKGGPEIGVISLCI 140
           +YKGT+  G EI V S  +
Sbjct: 341 IYKGTLSSGVEIAVDSTIV 359


>Glyma13g30130.1 
          Length = 694

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 9/85 (10%)

Query: 65  KKSAIVI-PWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDS-VV 122
           K++A VI PWK   S +      +    +  V + +R +LE+ACEDFSNI+    +   +
Sbjct: 369 KQAAKVIGPWKTGISGQ------LQKAFITGVPKLNRAELEIACEDFSNIVNLYYEGCTI 422

Query: 123 YKGTMKGGPEIGVISLCIREEQ-WT 146
           YKGT+  G EI V+S  I   Q W+
Sbjct: 423 YKGTLSNGVEIAVVSTLITSPQDWS 447


>Glyma05g29150.1 
          Length = 774

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 19/144 (13%)

Query: 2   QCAGASPAKSQPVVNPNHQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAFQ 61
           Q +GA PA        N  P    P    S+ P+ +  + IV          V +L  ++
Sbjct: 383 QSSGAFPAVPDTNKKQNQSPA---PLPSSSNSPTCVAVLVIV---------FVIMLCIWR 430

Query: 62  RCNKKSAIVIPWKKSAS---QKDHMTVYIDPEM--LKDVRRYSRQDLEVACEDFSNIIGS 116
           +  + + ++ PWK   S   QK  +T  ++        V + ++ +LE ACEDFSNII S
Sbjct: 431 K--RAAKVIKPWKTGISGQLQKAFITGTLEEVTGSCYGVPKLNQGELETACEDFSNIINS 488

Query: 117 SPDSVVYKGTMKGGPEIGVISLCI 140
             +  +YKGT+  G EI V S  +
Sbjct: 489 FDECTIYKGTLSSGVEIAVDSTIV 512


>Glyma15g08990.1 
          Length = 597

 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 65  KKSAIVI-PWKKSASQKDHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNI-IGSSPDSVV 122
           K++A VI PWK   S +      +    +  V + +R +LE ACEDFSNI I       +
Sbjct: 286 KRAAKVIGPWKTGLSGQ------LQKAFITGVPKLNRAELETACEDFSNIVIHCYEGCTI 339

Query: 123 YKGTMKGGPEIGVISLCIREEQ 144
           YKGT+    EI V+S  I   Q
Sbjct: 340 YKGTLSNEVEIAVVSTLITSSQ 361