Miyakogusa Predicted Gene

Lj4g3v0998950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0998950.1 Non Chatacterized Hit- tr|K3YVX1|K3YVX1_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si018417,71.83,3e-19,Ribosomal_L7_L12,Ribosomal protein L7/L12;
ClpS-like,Ribosomal protein L7/L12, C-terminal/adaptor pr,CUFF.48256.1
         (197 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g05920.1                                                       203   8e-53
Glyma16g24590.1                                                       199   2e-51
Glyma16g24600.1                                                       158   3e-39
Glyma08g17480.1                                                       110   1e-24
Glyma15g41650.1                                                       110   1e-24
Glyma15g14280.1                                                       102   2e-22
Glyma09g03360.1                                                       102   2e-22
Glyma20g12030.1                                                       102   3e-22
Glyma13g03630.1                                                       101   6e-22
Glyma11g10550.1                                                        69   4e-12
Glyma12g02850.1                                                        66   3e-11

>Glyma02g05920.1 
          Length = 199

 Score =  203 bits (517), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 123/207 (59%), Positives = 138/207 (66%), Gaps = 24/207 (11%)

Query: 2   RFTHFSLLRKTLT---QNPKFPSSPSIPRFAPXXXXXXXXXXXCRSLFARN-CSTAT--- 54
           +F H S   KTLT   QNP F S+       P            R   AR+ CS+     
Sbjct: 6   QFKHLSHFLKTLTRRPQNPTFASARISQNLPP------------RPSHARDYCSSGGASL 53

Query: 55  ---PEKVSAIVDELTGLTLLEVMDLVEVMREKKGINELPIAMLMVPGMGI-RGLPXXXXX 110
               EKV+AIVDE+ GLTLLEVMDLVEVMREK+G+NELPIAMLMVPGMG+ RG+P     
Sbjct: 54  SQGSEKVAAIVDEVMGLTLLEVMDLVEVMREKRGVNELPIAMLMVPGMGVPRGIPRGAAK 113

Query: 111 XXXXXXXXXXXXXXXXXTAFDVKLDAFDAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTV 170
                            TAFDVKL+ FDAA+KIKVIKEVRTFTSLGLKEAKDLVEKVP V
Sbjct: 114 GGGAATGGAEVKAAEK-TAFDVKLEGFDAAAKIKVIKEVRTFTSLGLKEAKDLVEKVPAV 172

Query: 171 LKKGVTKEEAEAIIAKLKDVGAKASME 197
           LKKGVTKEEAE+IIAK+K+VGAK SME
Sbjct: 173 LKKGVTKEEAESIIAKMKEVGAKVSME 199


>Glyma16g24590.1 
          Length = 194

 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/207 (59%), Positives = 137/207 (66%), Gaps = 29/207 (14%)

Query: 2   RFTHFSLLRKTLT--QNPKFPSSPSI---PRFAPXXXXXXXXXXXCRSLFARNCSTATP- 55
           +F H S   KTLT  QNP F  SP I   PR  P                AR CS+++  
Sbjct: 6   QFKHLSHFLKTLTRPQNPTF-VSPRISQNPRPLP--------------FHARECSSSSAS 50

Query: 56  -----EKVSAIVDELTGLTLLEVMDLVEVMREKKGINELPIAMLMVPGMGIRGLPXXXXX 110
                EKV+AIVDEL GLTLLEVMDLVEVMREK+G+NELPIAMLMVPGMG+   P     
Sbjct: 51  QSQGSEKVAAIVDELMGLTLLEVMDLVEVMREKRGVNELPIAMLMVPGMGV---PRGVPN 107

Query: 111 XXXXXXXXXXXXXXXXXTAFDVKLDAFDAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTV 170
                            T FDVKL+ FDAA+KIKVIKEVRTFTSLGLKEAKDLVEKVP +
Sbjct: 108 GGGGGAAGVAEVKAVEKTVFDVKLEGFDAATKIKVIKEVRTFTSLGLKEAKDLVEKVPAM 167

Query: 171 LKKGVTKEEAEAIIAKLKDVGAKASME 197
           LKKGVTKEEAE+IIAK+K+VGAK SME
Sbjct: 168 LKKGVTKEEAESIIAKMKEVGAKVSME 194


>Glyma16g24600.1 
          Length = 126

 Score =  158 bits (400), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 86/129 (66%), Positives = 97/129 (75%), Gaps = 3/129 (2%)

Query: 65  LTGLTLLEVMDLVEVMREKKGINELPIAMLMVPGMGIRGLPXXXXXXXXXXXXXXXXXXX 124
           + GLTLL+VMD+VEVMREK G+NELPIAM+MVPGMG+   P                   
Sbjct: 1   MMGLTLLKVMDMVEVMREKCGVNELPIAMVMVPGMGV---PRGVPKGGGGGTVGVAEVKA 57

Query: 125 XXXTAFDVKLDAFDAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTVLKKGVTKEEAEAII 184
              TAFDVKL+ FD A+KIKVIKEVR FTSLGLKEAKDLVEKVP VLKKGVTKEE E+II
Sbjct: 58  AEKTAFDVKLEGFDVAAKIKVIKEVRMFTSLGLKEAKDLVEKVPAVLKKGVTKEEVESII 117

Query: 185 AKLKDVGAK 193
           AK+K+VGAK
Sbjct: 118 AKMKEVGAK 126


>Glyma08g17480.1 
          Length = 216

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 92/154 (59%), Gaps = 9/154 (5%)

Query: 46  FARNCSTATP-EKVSAIVDELTGLTLLEVMDLVEVMREKKGINELPIAMLMVPGMG-IRG 103
           F  N     P E+V  ++DE+  LT+ E  +L  ++ +K G+ E+P    M  G G + G
Sbjct: 70  FDPNDHRGPPSERVFRLIDEIASLTVAEAGELGLILMKKMGVKEMPNVGFMKAGAGNLAG 129

Query: 104 LPXXXXXXXXXXXXXXXXXXXXXXTAFDVKLDAFDAASKIKVIKEVRTFTSLGLKEAKDL 163
           +                       T F++KL++++AASKIK+IKEVR FT LGLKEAKDL
Sbjct: 130 M-------AAKAPTAAKEEQKLEKTVFELKLESYEAASKIKIIKEVRGFTDLGLKEAKDL 182

Query: 164 VEKVPTVLKKGVTKEEAEAIIAKLKDVGAKASME 197
           VEK P+V+KKG++KEE E II KLK +GAK  ME
Sbjct: 183 VEKTPSVIKKGISKEEGEQIIEKLKALGAKVVME 216


>Glyma15g41650.1 
          Length = 217

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 87/143 (60%), Gaps = 8/143 (5%)

Query: 56  EKVSAIVDELTGLTLLEVMDLVEVMREKKGINELPIAMLMVPGMG-IRGLPXXXXXXXXX 114
           E+V  +VDE+  LT+ E  +L   + +K G+ E+P    M  G G + G+          
Sbjct: 82  ERVFRLVDEVASLTVAEAAELGLTLMKKMGVKEMPNVGFMKAGAGNLAGM-------AAK 134

Query: 115 XXXXXXXXXXXXXTAFDVKLDAFDAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTVLKKG 174
                        T F++KL++++AASKIK+IKEVR FT LGLKEAKDLVEK P V+KKG
Sbjct: 135 APTAAKEEQKPEKTVFELKLESYEAASKIKIIKEVRGFTDLGLKEAKDLVEKTPAVIKKG 194

Query: 175 VTKEEAEAIIAKLKDVGAKASME 197
           V+KEE E II KLK +GAK  ME
Sbjct: 195 VSKEEGEQIIEKLKALGAKVVME 217


>Glyma15g14280.1 
          Length = 192

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/70 (77%), Positives = 59/70 (84%)

Query: 128 TAFDVKLDAFDAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTVLKKGVTKEEAEAIIAKL 187
           TAFDVKL+ FDAA+KIKVIKEVR FT+LGLKEAKDLVEKVP VLK+GVTKEEA  II K+
Sbjct: 123 TAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPVVLKQGVTKEEANEIIEKI 182

Query: 188 KDVGAKASME 197
           K  G  A ME
Sbjct: 183 KAAGGVAVME 192


>Glyma09g03360.1 
          Length = 191

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/70 (75%), Positives = 59/70 (84%)

Query: 128 TAFDVKLDAFDAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTVLKKGVTKEEAEAIIAKL 187
           TAFDVKL+ FDAA+KIKVIKEVR FT+LGLKEAKDLVEKVP VLK+G+TKEEA  II K+
Sbjct: 122 TAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPVVLKQGITKEEANEIIEKI 181

Query: 188 KDVGAKASME 197
           K  G  A ME
Sbjct: 182 KAAGGVAVME 191


>Glyma20g12030.1 
          Length = 159

 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 83/148 (56%), Gaps = 18/148 (12%)

Query: 53  ATPEKVSAIVDELTGLTLLEVMDLVEVMREKKGINEL---PIAMLMVPGMGIRGLPXXXX 109
           A  +KV  I  EL  L   E  D   + R K G++     P+A +  P +          
Sbjct: 27  AREQKVERIATELLNLNRFERHDFTVLWRLKMGLHRYDAAPVAGVATPSV---------- 76

Query: 110 XXXXXXXXXXXXXXXXXXTAFDVKLDAFDAASKIKVIKEVRTFTSLGLKEAKDLVEKVPT 169
                             TAFD+KL+ +DAA+KIK+IKEVR+FT LGLKEAK+LVEKVP 
Sbjct: 77  -----VGAKVGASVAVEKTAFDLKLEKYDAAAKIKIIKEVRSFTDLGLKEAKELVEKVPC 131

Query: 170 VLKKGVTKEEAEAIIAKLKDVGAKASME 197
           VLKKG+TKEEA  I+ KLK++GA   +E
Sbjct: 132 VLKKGLTKEEANPIMEKLKELGAAVVLE 159


>Glyma13g03630.1 
          Length = 161

 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 84/149 (56%), Gaps = 14/149 (9%)

Query: 51  STATPEKVSAIVDELTGLTLLEVMDLVEVMREKKGINEL--PIAMLMVPGMGIRGLPXXX 108
           + A  +K+  I  EL  L   E  D   + R K G++    P+A + +P +         
Sbjct: 25  TEARGQKIERIATELLDLNSFERHDFTVLWRLKMGLHRYGAPVAGMTMPSV--------- 75

Query: 109 XXXXXXXXXXXXXXXXXXXTAFDVKLDAFDAASKIKVIKEVRTFTSLGLKEAKDLVEKVP 168
                               AFD+KL+ +DAA+KIK+IKEVR+FT LGLKEAKDLVEKVP
Sbjct: 76  ---GAAARAEAGAAAVAEKMAFDLKLEKYDAAAKIKIIKEVRSFTDLGLKEAKDLVEKVP 132

Query: 169 TVLKKGVTKEEAEAIIAKLKDVGAKASME 197
            VLKKG+TKEEA  I+ KLK++GA   +E
Sbjct: 133 CVLKKGLTKEEANPIMEKLKELGAAVVLE 161


>Glyma11g10550.1 
          Length = 188

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 13/142 (9%)

Query: 55  PEKVSAIVDELTGLTLLEVMDLVEVMREKKGINELPIAMLMVPGMGIRGLPXXXXXXXXX 114
           PEK++ + DE+ GLTL E  +LV+ +++K G++    A + V                  
Sbjct: 59  PEKITKLGDEIAGLTLEEAKNLVDFLQDKLGVSAAAFAPVAV-------------AAGAG 105

Query: 115 XXXXXXXXXXXXXTAFDVKLDAFDAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTVLKKG 174
                        T FDV ++   + ++I VIK VR  T+L LKEAK+L+E +P   K+G
Sbjct: 106 GAVADAPAVVEEKTEFDVVIEEVPSNARIAVIKAVRALTNLALKEAKELIEGLPKKFKEG 165

Query: 175 VTKEEAEAIIAKLKDVGAKASM 196
           ++K+EAE    +L++ GAK ++
Sbjct: 166 ISKDEAEDAKKQLEEAGAKVTI 187


>Glyma12g02850.1 
          Length = 190

 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 13/142 (9%)

Query: 55  PEKVSAIVDELTGLTLLEVMDLVEVMREKKGINELPIAMLMVPGMGIRGLPXXXXXXXXX 114
           PEK++ + DE+ GLTL E  +LV+ +++K G++    A + V                  
Sbjct: 61  PEKITKLGDEIAGLTLEEAKNLVDFLQDKLGVSAAAFAPVAV-------------AAGAV 107

Query: 115 XXXXXXXXXXXXXTAFDVKLDAFDAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTVLKKG 174
                        T FDV ++   + ++I VIK VR  T+L LKEAK+L+E +P   K+G
Sbjct: 108 GAVADAPAAVEEKTEFDVLIEEVPSNARIAVIKAVRALTNLALKEAKELIEGLPKKFKEG 167

Query: 175 VTKEEAEAIIAKLKDVGAKASM 196
           ++K+EAE    +L++ GAK ++
Sbjct: 168 ISKDEAEDAKKQLEEAGAKVTI 189