Miyakogusa Predicted Gene

Lj4g3v0998890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0998890.1 Non Chatacterized Hit- tr|A5C710|A5C710_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.61,0.00000000000002,seg,NULL; DUF2351,Ubiquitin-conjugating
enzyme E2C-binding protein,CUFF.48255.1
         (554 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g05960.1                                                       640   0.0  

>Glyma02g05960.1 
          Length = 562

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/559 (60%), Positives = 384/559 (68%), Gaps = 17/559 (3%)

Query: 9   EMDEWRFTWESQSQXXXXXXXXXXXXXXXXXXXX-QTVRXXXXXXXXXXXXXXXXXXXXX 67
           E   WR+TWE+QS                      + +                      
Sbjct: 6   EQQGWRYTWEAQSHIPTLRLTLFPNDKTLNPSLQCKDLAVDLHSSHSFLTLTASFLSLRV 65

Query: 68  PIPARVLLDADAPPTFRALSDHIEVKXXXXXXXXXXXXXXXXXXXXXRPLPMDS--DVEN 125
           P+PA VL+D D+P  FR LSDHIEVK                      P P+DS  DV+ 
Sbjct: 66  PLPA-VLVDGDSPVAFRPLSDHIEVKLLLLLPVDHPILSALDLSQTPPPDPLDSQSDVKI 124

Query: 126 LASHGEVDFYCRTCAFKLTKHPLRNFVEMPSANWREVADNWFGACCCSFGGVSEKLVLRY 185
           L+S GEVDFYCRTCAFKLT+ PLRNFVEMPS NWREVADNWFGACCCSFGG+SEK+V+RY
Sbjct: 125 LSSAGEVDFYCRTCAFKLTRIPLRNFVEMPSVNWREVADNWFGACCCSFGGISEKMVMRY 184

Query: 186 VNSHTCAPGICLLSPASVILCKDDLVECNLHAEGCGQRECGSKADNLXXXXXXXXXKASF 245
           V+S+ C PG+CL+S ASV LCKDDLVECN   EGCG++EC S    +           + 
Sbjct: 185 VSSYMCRPGVCLVSSASVTLCKDDLVECNF-LEGCGEQEC-STVTEVSRDDGVVKGMRNC 242

Query: 246 GLNEERTSTCADAGEVACAFEDKLRLVHPENEKLSMNFRGEG-------NDFSHSCTDSN 298
            LN+ERTSTC+D GEV  AF+   RLVHPE+EKLS+N R E         DF  SC D N
Sbjct: 243 ELNDERTSTCSDYGEVTHAFDSNSRLVHPEDEKLSVNLRCEVAKSKPGCGDFPDSCPDLN 302

Query: 299 GAEDVANTPSCCAHSMGIIGDEDGEHHLSGTARK----TETIEIRENQKPLLNGFLEDVF 354
            AEDV  TPSCCAH    +G  D EH+L GTA K    TET+EI  NQK  LNG+LEDVF
Sbjct: 303 HAEDVTQTPSCCAHLTSNVGHGDSEHNLCGTAGKKGMPTETVEILGNQKSFLNGYLEDVF 362

Query: 355 MARLSNLSKDIDWHEFTCPQCMSLLGAYPCCEGYAPVDGGVRLFKCYISTCVPVGGSEDI 414
           MARLSNLSKDIDW EFTCPQC SLLGAYPC EG  PVDGGVR FKCYISTCV VGGS D+
Sbjct: 363 MARLSNLSKDIDWREFTCPQCTSLLGAYPCREGQTPVDGGVRFFKCYISTCVQVGGSGDM 422

Query: 415 FSEYTMDKMFANQLMGCATDESSFRFVVRDLATKSPVLQIILLNPDTWSCSGNCSVVEDE 474
           FS+YTM KMFANQLM CA DESSFRFV+RDL TKSPVLQIILLNPDTWSCSGNCS +ED+
Sbjct: 423 FSKYTMGKMFANQLMECANDESSFRFVIRDLTTKSPVLQIILLNPDTWSCSGNCSSLEDK 482

Query: 475 DPVPKLQLRPIIKVLFSDFRAATESQLRMIEEWATKNSAEIFFMLSRQIQDLMGSLMTAK 534
           DP+ KL+L+PIIKVLFSD   ATESQ R+IEEWATKNSAE  FML+RQ Q+L+G  ++AK
Sbjct: 483 DPIAKLKLQPIIKVLFSDCHNATESQSRLIEEWATKNSAEDIFMLTRQTQELVGLFISAK 542

Query: 535 DIYPPSYASYQGLILSSVH 553
           D+YPP  AS QGLILSS+ 
Sbjct: 543 DLYPPCCASLQGLILSSLQ 561