Miyakogusa Predicted Gene

Lj4g3v0986760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0986760.1 Non Chatacterized Hit- tr|I1JCM5|I1JCM5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.12,0,FAMILY NOT
NAMED,NULL; seg,NULL; UPF0261,Uncharacterised protein family
UPF0261,90099_g.1
         (164 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g06040.1                                                       185   2e-47

>Glyma02g06040.1 
          Length = 741

 Score =  185 bits (470), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/166 (60%), Positives = 113/166 (68%), Gaps = 4/166 (2%)

Query: 1   MSQALENFLNESSHD--IAXXXXXXXXXXXXXXXXXXXXXXXGIPKLIVSTVASGQTEPY 58
           M+QALE FL +S  D  +                        GIPK+IVSTVASGQTEPY
Sbjct: 98  MTQALEQFLKKSHEDQSLVGVIGVGGSGGTSLLSSPFASLPIGIPKVIVSTVASGQTEPY 157

Query: 59  VGTSDLVLFPSIVDVAGXXXXXXXXXXXXXXXXXGMVVGRVQSLKDLDSRGEDCKPTVGL 118
           VGTSDLVLFPS+VDVAG                 GMVVGRVQSL++  SR ED KPTVG+
Sbjct: 158 VGTSDLVLFPSVVDVAGINRVSRLILSNAAAAFAGMVVGRVQSLQE-SSRAED-KPTVGI 215

Query: 119 TMFGVTTSCVNAVRDRLRDEGYESLVFHATGVGGRAMEDLVRQGFI 164
           TMFGVTT CVNAVRDRL +EGYE+LVFHATGVGGRAME+LVR+GFI
Sbjct: 216 TMFGVTTPCVNAVRDRLHEEGYETLVFHATGVGGRAMENLVREGFI 261