Miyakogusa Predicted Gene

Lj4g3v0985590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0985590.1 tr|G7LDW3|G7LDW3_MEDTR Tm-1^GCR26 protein
OS=Medicago truncatula GN=MTR_8g076950 PE=4 SV=1,95.5,0,FAMILY NOT
NAMED,NULL; TIM-br_sig_trns,TIM-barrel signal transduction protein,
predicted; seg,NULL; ,CUFF.48734.1
         (223 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g06040.1                                                       404   e-113
Glyma16g24730.1                                                       383   e-107

>Glyma02g06040.1 
          Length = 741

 Score =  404 bits (1037), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/220 (89%), Positives = 202/220 (91%)

Query: 1   MAGRGSLAGLLPFADANAVVLDMANEXXXXXXXXXXXXXXCATDPFRRMEYFLKQVESTG 60
           MAGRGSLAGLLPFADANAVVLDMANE              CATDPFRRM+YFLKQVESTG
Sbjct: 519 MAGRGSLAGLLPFADANAVVLDMANEVLPVVKKVPVLAGVCATDPFRRMDYFLKQVESTG 578

Query: 61  FSGVQNFPTVGLFDGNFRQNLEETGMGYSLEVEMIRKAHNMGLLTTPYAFNQHEAIEMAK 120
           FSGVQNFPTVGLFDGNFRQNLEETGMGYSLEVEMI+KAH MGLLTTPYAFNQ+EAIEMAK
Sbjct: 579 FSGVQNFPTVGLFDGNFRQNLEETGMGYSLEVEMIQKAHKMGLLTTPYAFNQYEAIEMAK 638

Query: 121 AGADIIVAHMGLTTTGSIGAKTAVSLEESVVRVQAIADAAHRINPNAIVLCHGGPISGPE 180
            GADIIVAHMGLTTTGSIGAKTAVSLEESVVRVQAIADAAHRINP  IVLCHGGPISGP+
Sbjct: 639 VGADIIVAHMGLTTTGSIGAKTAVSLEESVVRVQAIADAAHRINPGVIVLCHGGPISGPK 698

Query: 181 EAEFILKRTKGVHGFYGASSMERLPVEQAITSTVKQYKSI 220
           EAEFILKRTKGVHGFYGASSMERLPVEQAIT+TVK+YKSI
Sbjct: 699 EAEFILKRTKGVHGFYGASSMERLPVEQAITNTVKEYKSI 738


>Glyma16g24730.1 
          Length = 473

 Score =  383 bits (984), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/222 (84%), Positives = 197/222 (88%)

Query: 1   MAGRGSLAGLLPFADANAVVLDMANEXXXXXXXXXXXXXXCATDPFRRMEYFLKQVESTG 60
           MAGRGSLAGLLPF+DANAVVLDMANE              CAT  FRRM+YFLKQVESTG
Sbjct: 251 MAGRGSLAGLLPFSDANAVVLDMANEVLPVVKKVPVLAGVCATGLFRRMDYFLKQVESTG 310

Query: 61  FSGVQNFPTVGLFDGNFRQNLEETGMGYSLEVEMIRKAHNMGLLTTPYAFNQHEAIEMAK 120
           FSG+QNFPTVGLFDGNFR NLEETGMGYSLEVEMI+KAH MGL TTPYAFNQ+EAIEMAK
Sbjct: 311 FSGLQNFPTVGLFDGNFRLNLEETGMGYSLEVEMIQKAHKMGLFTTPYAFNQYEAIEMAK 370

Query: 121 AGADIIVAHMGLTTTGSIGAKTAVSLEESVVRVQAIADAAHRINPNAIVLCHGGPISGPE 180
            GADIIVAHMGLTTTGSIGAKT+VSL+ESVV VQAIADAAHRINP  IVLCHGGPISGP+
Sbjct: 371 VGADIIVAHMGLTTTGSIGAKTSVSLKESVVHVQAIADAAHRINPGVIVLCHGGPISGPK 430

Query: 181 EAEFILKRTKGVHGFYGASSMERLPVEQAITSTVKQYKSIFI 222
           EA F+LKRTKGVHGFYGASSMERLPVEQAIT+TVKQYKSI I
Sbjct: 431 EAAFVLKRTKGVHGFYGASSMERLPVEQAITNTVKQYKSISI 472