Miyakogusa Predicted Gene

Lj4g3v0975580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0975580.1 Non Chatacterized Hit- tr|A2V887|A2V887_TOBAC
Putative uncharacterized protein RsRG3-11 (Fragment)
O,65.28,1e-18,seg,NULL; PALMITOYL PROTEIN THIOESTERASE-RELATED,NULL;
PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOS,CUFF.48249.1
         (239 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g37710.1                                                       171   5e-43
Glyma11g07590.1                                                       163   2e-40
Glyma11g07590.2                                                       162   2e-40

>Glyma01g37710.1 
          Length = 286

 Score =  171 bits (434), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 98/177 (55%), Positives = 112/177 (63%), Gaps = 10/177 (5%)

Query: 3   ANTAAIFYNPSNNFLGTNLQHKHRLLKXXXXXXXXXXXXXTLFLGGFVGDK-------LC 55
           A    I Y PS+  LG+NL  K R LK             +L   GFV  K         
Sbjct: 2   AAATTICYGPSSIVLGSNLL-KRRHLKNTSFADRFSPSR-SLLCSGFVPRKPALGRNSFW 59

Query: 56  AANAMDDGFKGACAHRDEKSDGQVQVVEQEAFIDGSSEFHPKFLFHELESTLNQMSKWLV 115
            +  MD+   G  A RD K D  +QV EQEAFIDGSS F  KFL  E+E  LN++SKW+V
Sbjct: 60  VSKIMDESV-GTSAFRDAKGDETIQVFEQEAFIDGSSPFRFKFLSPEVEYKLNRLSKWIV 118

Query: 116 TAIFGVFILWRHDAEALWFAAGSFLNAMLSASLKQMLNQKRPSTLKSDPGMPSSHAQ 172
           TA+FG FILWRHDAEALWF AGS LNAMLS  LK++LNQ+RPSTLKSDPGMPSSHAQ
Sbjct: 119 TALFGSFILWRHDAEALWFTAGSVLNAMLSVLLKRILNQERPSTLKSDPGMPSSHAQ 175


>Glyma11g07590.1 
          Length = 289

 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/121 (65%), Positives = 92/121 (76%), Gaps = 1/121 (0%)

Query: 52  DKLCAANAMDDGFKGACAHRDEKSDGQVQVVEQEAFIDGSSEFHPKFLFHELESTLNQMS 111
           +    +  MD+  +   A RD K D  +QV EQEAFIDGS+ F  KFL  E+E  LN+MS
Sbjct: 57  NSFWVSKTMDESAR-TSAFRDGKGDETIQVFEQEAFIDGSTPFQSKFLSPEVEYNLNRMS 115

Query: 112 KWLVTAIFGVFILWRHDAEALWFAAGSFLNAMLSASLKQMLNQKRPSTLKSDPGMPSSHA 171
           KW+VTA+FG FILWRHDAEALWF AGS LNAMLS  LK++LNQ+RPSTLKSDPGMPSSHA
Sbjct: 116 KWIVTALFGGFILWRHDAEALWFTAGSVLNAMLSVLLKRILNQERPSTLKSDPGMPSSHA 175

Query: 172 Q 172
           Q
Sbjct: 176 Q 176


>Glyma11g07590.2 
          Length = 287

 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/121 (65%), Positives = 92/121 (76%), Gaps = 1/121 (0%)

Query: 52  DKLCAANAMDDGFKGACAHRDEKSDGQVQVVEQEAFIDGSSEFHPKFLFHELESTLNQMS 111
           +    +  MD+  +   A RD K D  +QV EQEAFIDGS+ F  KFL  E+E  LN+MS
Sbjct: 57  NSFWVSKTMDESAR-TSAFRDGKGDETIQVFEQEAFIDGSTPFQSKFLSPEVEYNLNRMS 115

Query: 112 KWLVTAIFGVFILWRHDAEALWFAAGSFLNAMLSASLKQMLNQKRPSTLKSDPGMPSSHA 171
           KW+VTA+FG FILWRHDAEALWF AGS LNAMLS  LK++LNQ+RPSTLKSDPGMPSSHA
Sbjct: 116 KWIVTALFGGFILWRHDAEALWFTAGSVLNAMLSVLLKRILNQERPSTLKSDPGMPSSHA 175

Query: 172 Q 172
           Q
Sbjct: 176 Q 176