Miyakogusa Predicted Gene

Lj4g3v0975570.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0975570.2 Non Chatacterized Hit- tr|I1JCN0|I1JCN0_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,78.06,0,era:
GTP-binding protein Era,GTP-binding protein Era; small_GTP: small
GTP-binding protein domain,Sm,CUFF.48248.2
         (453 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g06100.1                                                       658   0.0  
Glyma16g24870.1                                                       650   0.0  
Glyma07g27590.1                                                        88   2e-17
Glyma12g06150.1                                                        60   4e-09
Glyma04g11560.1                                                        55   2e-07
Glyma06g11130.1                                                        54   5e-07

>Glyma02g06100.1 
          Length = 421

 Score =  658 bits (1698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/408 (79%), Positives = 350/408 (85%), Gaps = 5/408 (1%)

Query: 48  QHSLF--PVHGFTLFHRNRTDSPSHLCCRTRHRHSQPFANKQHHLVLHXXXXXXXXXXXX 105
           QHSLF  PV  F+ FHRNRT+  S LCC++RHR  + F+NKQ    +             
Sbjct: 17  QHSLFFFPVPAFSTFHRNRTEPLSPLCCKSRHRRLEAFSNKQDQFWVSEEELELELEEGE 76

Query: 106 XXXXXXXXASYSDDDTSFLSLTVKPDRNMALLDDYETEELDFDDGPNHRSGYVALLGKPN 165
                          +SFLSL+ KPDRNMALLDDYE EELDF+ GP+HRSGYV LLGKPN
Sbjct: 77  DSYLDGDDHGDD---SSFLSLSDKPDRNMALLDDYEGEELDFEFGPDHRSGYVTLLGKPN 133

Query: 166 VGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSGTDYQMVLYDTPGVLQKEMHKLDSMM 225
           VGKSTLANQM+GQKLSIVTDKPQTTRHRILCICSG DYQM+LYD PGVLQKEMHKLDSMM
Sbjct: 134 VGKSTLANQMLGQKLSIVTDKPQTTRHRILCICSGEDYQMILYDKPGVLQKEMHKLDSMM 193

Query: 226 MKNVRSAAVNADCVLVLVDACKAPEKIDELLEEGIGDLKDKPPVLLILNKKDLIKPGEVA 285
           MKNVRSAAVNADCVLVLVDA KAPEKID LLEEGIGDLKDKPP LLILNKKDL+KPGE+A
Sbjct: 194 MKNVRSAAVNADCVLVLVDARKAPEKIDGLLEEGIGDLKDKPPTLLILNKKDLVKPGELA 253

Query: 286 KKLEWYEKFTNVDEVIPVSAKYGHGVADVKDWILSKLPNGPSYYPKDIVSEHPERFFVAE 345
           KKLEWYEK T+VDEVIPVSAKYG GV DVKDWILSKLPNGP+YYPKDIVSEHPERFFVAE
Sbjct: 254 KKLEWYEKLTDVDEVIPVSAKYGQGVEDVKDWILSKLPNGPAYYPKDIVSEHPERFFVAE 313

Query: 346 IVREKIFMQYRNEIPYACQVNVVSYKARPNAKDFIQVEILVEKNSQKMIVIGREGKALKL 405
           IVREKIFMQYRNEIPYACQVNVV+YKARPNAK++IQVEILVEKNSQK+I+IGREGKALKL
Sbjct: 314 IVREKIFMQYRNEIPYACQVNVVNYKARPNAKEYIQVEILVEKNSQKIILIGREGKALKL 373

Query: 406 LATASRLDIEDFLQKKVYLEIEVKVRENWRQDEGLLKDYGYGGQIRVL 453
           LATA+RLD+EDFLQKKVYLEIEVKVR NWRQDEGLL  YGYGGQIRV+
Sbjct: 374 LATAARLDVEDFLQKKVYLEIEVKVRANWRQDEGLLNHYGYGGQIRVI 421


>Glyma16g24870.1 
          Length = 428

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/420 (78%), Positives = 354/420 (84%), Gaps = 6/420 (1%)

Query: 37  TVPQPQFSFQL-QHSLF--PVHGFTLFHRNRTDSPSHLCCRTRHRHSQPFANKQHHLVLH 93
            VP   F FQ  QHSLF  P   F+ FHRNRT+  S  CC++RHR  +  ++KQ  L + 
Sbjct: 12  VVPTQHFLFQFHQHSLFFFPKTAFSTFHRNRTEPLSLPCCKSRHRRLEALSSKQDQLWVS 71

Query: 94  XXXXXXXXXXXXXXXXXXXXASYSDDDTSFLSLTVKPDRNMALLDDYETEELDFDDGPNH 153
                                      +SFLSL+ KPDRNMA+LDDYE EELDFD GP+H
Sbjct: 72  EEELELELEEGEDSYLDGDDDDDD---SSFLSLSDKPDRNMAMLDDYEGEELDFDYGPDH 128

Query: 154 RSGYVALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSGTDYQMVLYDTPGV 213
           RSGYVALLGKPNVGKSTLANQM+GQKLSIVTDKPQTTRHRILCICSGTDYQM+LYDTPGV
Sbjct: 129 RSGYVALLGKPNVGKSTLANQMLGQKLSIVTDKPQTTRHRILCICSGTDYQMILYDTPGV 188

Query: 214 LQKEMHKLDSMMMKNVRSAAVNADCVLVLVDACKAPEKIDELLEEGIGDLKDKPPVLLIL 273
           LQKEMH LDSMMMKNVRSAAVNADCVLVLVDA K PEKID LLEEGIGDLKDKPP LLIL
Sbjct: 189 LQKEMHLLDSMMMKNVRSAAVNADCVLVLVDARKTPEKIDGLLEEGIGDLKDKPPTLLIL 248

Query: 274 NKKDLIKPGEVAKKLEWYEKFTNVDEVIPVSAKYGHGVADVKDWILSKLPNGPSYYPKDI 333
           NKKDL+KPGE+AKKLEWYEKFT VDEVIPVSAKYG GV DVKDWILSKLPNGP+YYPKDI
Sbjct: 249 NKKDLVKPGELAKKLEWYEKFTEVDEVIPVSAKYGQGVEDVKDWILSKLPNGPAYYPKDI 308

Query: 334 VSEHPERFFVAEIVREKIFMQYRNEIPYACQVNVVSYKARPNAKDFIQVEILVEKNSQKM 393
           VSEHPERFFVAEIVREKIFMQYRNEIPYACQVNVV+YKARPNAK++IQVEILVEKN+QK+
Sbjct: 309 VSEHPERFFVAEIVREKIFMQYRNEIPYACQVNVVNYKARPNAKEYIQVEILVEKNTQKI 368

Query: 394 IVIGREGKALKLLATASRLDIEDFLQKKVYLEIEVKVRENWRQDEGLLKDYGYGGQIRVL 453
           I+IGREGKALKLLATA+RLD+EDFLQKKVYLEIEVKVR NWRQDEGLL  YGYGGQIRV+
Sbjct: 369 ILIGREGKALKLLATAARLDVEDFLQKKVYLEIEVKVRANWRQDEGLLNHYGYGGQIRVI 428


>Glyma07g27590.1 
          Length = 416

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 138/296 (46%), Gaps = 27/296 (9%)

Query: 152 NHRSGYVALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSGTDYQMVLYDTP 211
           + +S  V ++G PN GKS L N MVG K++ V+ K  TT H ++ + +  D Q+  +DTP
Sbjct: 127 DQKSLSVGIIGAPNAGKSALTNYMVGTKVAAVSRKTNTTTHEVVGVLTKGDTQICFFDTP 186

Query: 212 GVLQKEMHKLDSMMMKNVRS------AAVNADCVLVLV-----DACKAPEKIDELLEE-G 259
           G+    M        ++V+       ++VN   VL+++        +   ++ +L++  G
Sbjct: 187 GL----MLNCGGFPYRDVKVRVESAWSSVNLYEVLIVIFDVHRHITRPDSRVIQLIKRMG 242

Query: 260 IGDLKDKPPVL------LILNKKDLIKPGEVAKKLEWYEKFTNVDEVIPVSAKYGHGVAD 313
              + ++  +L      L+  KKDL+K  E  K L  YE++  +  +   ++ Y +    
Sbjct: 243 ARSIPNQRRILCMNKIDLVEKKKDLLKVAEEFKDLPGYERYFMISGLKGHASFYFYFPLR 302

Query: 314 VKDWILSKLPNGPSYYPKDIVSEHPERFFVAEIVREKIFMQYRNEIPYACQVNVVSYKAR 373
           + + +       P       +SE   +    E+VRE++      EIPY  +  ++ +K  
Sbjct: 303 ISNAVQRPWEEDPF-----TMSEEVMKMIALEVVRERLLDHVHQEIPYDVEHRLIDWKEL 357

Query: 374 PNAKDFIQVEILVEKNSQKMIVIGREGKALKLLATASRLDIEDFLQKKVYLEIEVK 429
            +    I+   +  K SQ  I++G+ G  +  +   +  ++    +K+V+L + V+
Sbjct: 358 RDGSLRIEQHFITNKLSQCKILVGKNGSKIGRIGIEANEELRSIFKKQVHLILRVR 413


>Glyma12g06150.1 
          Length = 632

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 33/194 (17%)

Query: 158 VALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSGTDYQMVLYDTPGVL--- 214
           VA++G+PNVGKS L N++VG   +IV D+P  TR R+       +++ ++ DT GV+   
Sbjct: 132 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVITVS 191

Query: 215 --------------------------QKEMHKLDSMMMKNVRSAAVNADCVLVLVDACKA 248
                                     +  + ++ SM+ +   +A   +  ++ LVD    
Sbjct: 192 KSQATVMEELAITTTIGMDGIPLAVREAAVARMPSMIERQATAAVEESSVIIFLVDGQAG 251

Query: 249 PEKIDELLEEGIGDLKDKPPVLLILNKKDLIKPGEVAKKLEWYEKFTNVDEVIPVSAKYG 308
               DE + + +        V+L +NK +  +   +     W   F    E +P+SA  G
Sbjct: 252 LTAADEEIADWLRKNYSDKYVILAVNKCESPRKRIMQASEFWSLGF----EPLPISAISG 307

Query: 309 HGVADVKDWILSKL 322
            G  ++ D + S L
Sbjct: 308 TGTGELLDLVCSGL 321



 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 9/142 (6%)

Query: 158 VALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSGTDYQ-MVLYDTPGVLQK 216
           ++++G+PNVGKS++ N +VG+  +IV+    TTR  I    +G D Q   L DT G+ ++
Sbjct: 339 ISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFQLIDTAGIRKR 398

Query: 217 EM-----HKLDSMMMKNVRSAAVNADCVLVLVDACKAPEKIDELLEEGIGDLKDKPPVLL 271
                     +++ +     A   +D V ++++A     + D  + E I   K+    ++
Sbjct: 399 TAIASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIE--KEGKGCVI 456

Query: 272 ILNKKDLIKPGEVAKKLEWYEK 293
           ++NK D I P +  +   +YE+
Sbjct: 457 VVNKWDTI-PNKNQQTASYYEQ 477


>Glyma04g11560.1 
          Length = 587

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 11/168 (6%)

Query: 158 VALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRILCICSGTDYQMVLYDTPGVLQKE 217
           +A++G+PNVGKS+L N     + +IVT+   TTR  I    S +   + L DT G+   +
Sbjct: 342 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASISVSGIPITLLDTAGIRDTD 401

Query: 218 MHKLDSMMMKNVRSAAVNADCVLVLVDACKAPEKIDELLEEGI----GDLKDKPPVLLIL 273
              ++ + ++   + A  AD +++ + A +     D  L E I    G      PV+L++
Sbjct: 402 -DIVEKIGVERSEAVARGADLIIMTMSAVEGWTSEDTKLLERIQSTKGSTGSSTPVILVV 460

Query: 274 NKKDLIKPGEVAKKLEWYEKFTN--VDEVIPVSAKYGHGVADVKDWIL 319
           NK D  KP     + EW +   N    + +   A  G G+ D++  +L
Sbjct: 461 NKID-CKP---CAETEWDKGCQNHIFSKHVFTCAVTGQGLHDLEGAVL 504


>Glyma06g11130.1 
          Length = 398

 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 8/159 (5%)

Query: 124 LSLTVKPDRNMALLDDYETEELDFDDGPNHRSGY-VALLGKPNVGKSTLANQMVGQKLSI 182
           L+LT+    NM+   +   E  ++D     +SG  +A++G+PNVGKS+L N     + +I
Sbjct: 120 LNLTMDKIHNMSREVENALETANYD--KLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAI 177

Query: 183 VTDKPQTTRHRILCICSGTDYQMVLYDTPGVLQKEMHKLDSMMMKNVRSAAVNADCVLVL 242
           VT+   TTR  I    S +   + L DT G+   +   ++ + ++   + A  AD +++ 
Sbjct: 178 VTEIAGTTRDVIEASISVSGIPITLLDTAGIRDTD-DIVEKIGVERSEAVARGADLIIMT 236

Query: 243 VDACKAPEKIDELLEEGI----GDLKDKPPVLLILNKKD 277
           V A +     D  L E I    G      PV+L++NK D
Sbjct: 237 VSAVEGWTSEDTKLLERIQSTKGSTGSSTPVILVVNKID 275